BLASTX nr result

ID: Dioscorea21_contig00024215 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024215
         (1616 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265047.2| PREDICTED: ribosomal RNA large subunit methy...   578   e-162
ref|XP_002451632.1| hypothetical protein SORBIDRAFT_04g004900 [S...   578   e-162
gb|EAY84671.1| hypothetical protein OsI_06043 [Oryza sativa Indi...   575   e-161
ref|XP_003570303.1| PREDICTED: ribosomal RNA large subunit methy...   572   e-161
ref|XP_003531813.1| PREDICTED: ribosomal RNA large subunit methy...   570   e-160

>ref|XP_002265047.2| PREDICTED: ribosomal RNA large subunit methyltransferase I-like
            [Vitis vinifera]
          Length = 507

 Score =  578 bits (1491), Expect = e-162
 Identities = 288/390 (73%), Positives = 330/390 (84%), Gaps = 1/390 (0%)
 Frame = -1

Query: 1364 TQIFRDGSPMVYSGAVDRIIGRPPPKTGDIVLVADGLEKPIGWGLYNSVSMFCVRLMQLE 1185
            TQ+FRDGSPMVYSGAVDRIIGRPPP+TGD+V+VADG EKPIGWGLYNSVSMFCVRLMQ E
Sbjct: 112  TQLFRDGSPMVYSGAVDRIIGRPPPRTGDVVVVADGTEKPIGWGLYNSVSMFCVRLMQQE 171

Query: 1184 EEATRDLNCALDMEKLLETRFDAAIELRGSLGLPSVDTTAYRLINSEGDRLSGLIIDVFG 1005
            EEATRD +CAL+MEKLLETR DAAIELR +LGLPS +T AYRL+NSEGDRLSGLI+DVFG
Sbjct: 172  EEATRDPSCALNMEKLLETRIDAAIELRRNLGLPSANTNAYRLVNSEGDRLSGLIVDVFG 231

Query: 1004 DXXXXXXXXXXVEQYKSEIELHIRTMKNIKHIKWRPSIDILKEEGLDISDQTDSD-SSML 828
            D          VE+YK ++E  I  +  I HI WR S+++LKEEGLD++D       +  
Sbjct: 232  DLAVIASSAAWVEKYKPQVEACISRIDEINHINWRQSVEMLKEEGLDLTDLKGIHLPTSH 291

Query: 827  SEVKVMENGICYNVSLAGQKTGFYADQRENRRLISLISKDQKVLDVCCYSGGFALNAAKG 648
              VKV+ENGI Y +S  GQKTGFYADQRENR  IS IS+ Q+VLD+CCYSGGFALNA  G
Sbjct: 292  QRVKVIENGISYAISPEGQKTGFYADQRENRHFISTISEGQRVLDMCCYSGGFALNAVCG 351

Query: 647  GAEYVIGIDSSSPALELAEENVRLNKFNPEKISFMRKDATEFMKEAASRQEVWDIVILDP 468
            GA  V G+D+S PALELA EN+ LN  +P KISF+R+DATEFMK+A +R E WDIVILDP
Sbjct: 352  GAVNVTGVDTSMPALELANENIILNNLDPGKISFLRRDATEFMKDAVARNESWDIVILDP 411

Query: 467  PKLAPRRKVLQNASGMYRNLNSLAMKITKKGGLLMTCSCSGAITQSGTFLRILQGAASMA 288
            PKLAPRRKVLQ+ASGMYRNLNSLAM++T++GGLLMTCSCSGA+TQSGTF+RILQGAASMA
Sbjct: 412  PKLAPRRKVLQSASGMYRNLNSLAMQLTRRGGLLMTCSCSGAMTQSGTFMRILQGAASMA 471

Query: 287  GRKITILRQAGAACDHPIDPSYPEGAYLTN 198
            GRKIT+LRQAGAACDHPIDPSYPEGAYL+N
Sbjct: 472  GRKITLLRQAGAACDHPIDPSYPEGAYLSN 501


>ref|XP_002451632.1| hypothetical protein SORBIDRAFT_04g004900 [Sorghum bicolor]
            gi|241931463|gb|EES04608.1| hypothetical protein
            SORBIDRAFT_04g004900 [Sorghum bicolor]
          Length = 460

 Score =  578 bits (1489), Expect = e-162
 Identities = 287/390 (73%), Positives = 329/390 (84%)
 Frame = -1

Query: 1364 TQIFRDGSPMVYSGAVDRIIGRPPPKTGDIVLVADGLEKPIGWGLYNSVSMFCVRLMQLE 1185
            TQIFRDGSPMVYSGAVDRIIGRPPPK+GD+VLVADG EKPIGWGLYNSVSMFCVRLMQLE
Sbjct: 67   TQIFRDGSPMVYSGAVDRIIGRPPPKSGDVVLVADGTEKPIGWGLYNSVSMFCVRLMQLE 126

Query: 1184 EEATRDLNCALDMEKLLETRFDAAIELRGSLGLPSVDTTAYRLINSEGDRLSGLIIDVFG 1005
            E+A RD  CAL+ME+LLE R  +A++LR SLGLPS DT AYRLINSEGDRLSGLI+D+F 
Sbjct: 127  EDAIRDPTCALNMERLLEARISSAVDLRRSLGLPSADTNAYRLINSEGDRLSGLIVDIFA 186

Query: 1004 DXXXXXXXXXXVEQYKSEIELHIRTMKNIKHIKWRPSIDILKEEGLDISDQTDSDSSMLS 825
            D          VE+Y+ EI+  +  +  I HIKWRPS DILKEEGLDIS+  +  +S  S
Sbjct: 187  DVAVIASSAAWVEKYRQEIQFLVSKVNGISHIKWRPSADILKEEGLDISEHKEP-ASPCS 245

Query: 824  EVKVMENGICYNVSLAGQKTGFYADQRENRRLISLISKDQKVLDVCCYSGGFALNAAKGG 645
             VKVMENGI Y VSL GQKTGFYADQRENR  ISL+SKDQ+VLD+CCYSGGFALNAAKGG
Sbjct: 246  TVKVMENGIVYLVSLEGQKTGFYADQRENRSFISLLSKDQRVLDLCCYSGGFALNAAKGG 305

Query: 644  AEYVIGIDSSSPALELAEENVRLNKFNPEKISFMRKDATEFMKEAASRQEVWDIVILDPP 465
            A+ VIGIDSS  AL+LA EN+ LN+ N  KISF++ DAT FMK A S  E+WD+VILDPP
Sbjct: 306  ADNVIGIDSSGLALDLANENIVLNELNHGKISFVKGDATTFMKGAISENELWDLVILDPP 365

Query: 464  KLAPRRKVLQNASGMYRNLNSLAMKITKKGGLLMTCSCSGAITQSGTFLRILQGAASMAG 285
            KLAPR+KVLQ+ASGMYR+LN+LAM++ K GGLLMTCSCSGA+TQSG FL+ +QGAASMAG
Sbjct: 366  KLAPRKKVLQSASGMYRSLNALAMQVVKPGGLLMTCSCSGAMTQSGMFLKTIQGAASMAG 425

Query: 284  RKITILRQAGAACDHPIDPSYPEGAYLTNY 195
            RK+T+LRQAGAACDHPIDP+YPEG YL+NY
Sbjct: 426  RKVTVLRQAGAACDHPIDPAYPEGQYLSNY 455


>gb|EAY84671.1| hypothetical protein OsI_06043 [Oryza sativa Indica Group]
          Length = 464

 Score =  575 bits (1481), Expect = e-161
 Identities = 283/391 (72%), Positives = 330/391 (84%), Gaps = 1/391 (0%)
 Frame = -1

Query: 1364 TQIFRDGSPMVYSGAVDRIIGRPPPKTGDIVLVADGLEKPIGWGLYNSVSMFCVRLMQLE 1185
            TQIFRDGSPMVYSGAVDRIIGRPPPKTGD+VLVADG EKPIGWGLYNSVSMFCVRLMQLE
Sbjct: 69   TQIFRDGSPMVYSGAVDRIIGRPPPKTGDVVLVADGAEKPIGWGLYNSVSMFCVRLMQLE 128

Query: 1184 EEATRDLNCALDMEKLLETRFDAAIELRGSLGLPSVDTTAYRLINSEGDRLSGLIIDVFG 1005
            EEA RD  CAL+ME+LLE R  +A++LR SLGLPSV T AYRLINSEGDRLSGLI+D+F 
Sbjct: 129  EEAKRDPTCALNMERLLEARILSAVDLRRSLGLPSVHTNAYRLINSEGDRLSGLIVDIFA 188

Query: 1004 DXXXXXXXXXXVEQYKSEIELHIRTMKNIKHIKWRPSIDILKEEGLDISDQTDSD-SSML 828
            D          VE+Y+ EI+  +  + ++ HIKWR S DILKEEGLD+S+Q D + SS  
Sbjct: 189  DVAVVASSAAWVEKYRHEIQFLVNKVSDVNHIKWRSSTDILKEEGLDVSEQKDPELSSHC 248

Query: 827  SEVKVMENGICYNVSLAGQKTGFYADQRENRRLISLISKDQKVLDVCCYSGGFALNAAKG 648
              V+VMEN + Y VSL GQKTGFYADQRENR  IS +SKDQ+VLD+CCYSGGFALNAAKG
Sbjct: 249  GTVEVMENDVLYLVSLEGQKTGFYADQRENRHFISTLSKDQRVLDLCCYSGGFALNAAKG 308

Query: 647  GAEYVIGIDSSSPALELAEENVRLNKFNPEKISFMRKDATEFMKEAASRQEVWDIVILDP 468
            GA  VIGIDSS+ AL+LA +N+ LNK + ++ISF+++DAT FMK A SR EVWD+VILDP
Sbjct: 309  GANNVIGIDSSASALDLASKNIILNKLDTQRISFVKEDATAFMKGAISRNEVWDLVILDP 368

Query: 467  PKLAPRRKVLQNASGMYRNLNSLAMKITKKGGLLMTCSCSGAITQSGTFLRILQGAASMA 288
            PKLAPR+KVLQ+ASGMYR+LN+LAM++ K GGLLMTCSCSGA+TQSG FLR +QGAASM 
Sbjct: 369  PKLAPRKKVLQSASGMYRSLNALAMQVVKPGGLLMTCSCSGAMTQSGLFLRTIQGAASMT 428

Query: 287  GRKITILRQAGAACDHPIDPSYPEGAYLTNY 195
            GRK+T+LRQAGAACDHP+DP+YPEG YL+NY
Sbjct: 429  GRKVTVLRQAGAACDHPVDPAYPEGRYLSNY 459


>ref|XP_003570303.1| PREDICTED: ribosomal RNA large subunit methyltransferase I-like
            [Brachypodium distachyon]
          Length = 448

 Score =  572 bits (1475), Expect = e-161
 Identities = 283/391 (72%), Positives = 329/391 (84%), Gaps = 1/391 (0%)
 Frame = -1

Query: 1364 TQIFRDGSPMVYSGAVDRIIGRPPPKTGDIVLVADGLEKPIGWGLYNSVSMFCVRLMQLE 1185
            TQIFRDGSPMVYSGAVDRIIGRPPPKTGD+VLVADG EKPIGWGLYNSVSMFCVRLMQLE
Sbjct: 53   TQIFRDGSPMVYSGAVDRIIGRPPPKTGDVVLVADGSEKPIGWGLYNSVSMFCVRLMQLE 112

Query: 1184 EEATRDLNCALDMEKLLETRFDAAIELRGSLGLPSVDTTAYRLINSEGDRLSGLIIDVFG 1005
            EEA RD   AL+M +LLE R  +A++LR SLGLPS +T AYRLINSEGDRLSGLI+D+F 
Sbjct: 113  EEAKRDPTSALNMGRLLEERISSAVDLRRSLGLPSTNTNAYRLINSEGDRLSGLIVDIFA 172

Query: 1004 DXXXXXXXXXXVEQYKSEIELHIRTMKNIKHIKWRPSIDILKEEGLDISDQTD-SDSSML 828
            D          VE+Y  EI+  +  + ++ HIKWR S DILKEEGLDIS+Q + + SS  
Sbjct: 173  DVAVIASSAAWVEKYSQEIQFLVNKVSDVNHIKWRSSTDILKEEGLDISEQKEHAPSSHP 232

Query: 827  SEVKVMENGICYNVSLAGQKTGFYADQRENRRLISLISKDQKVLDVCCYSGGFALNAAKG 648
              VKVMENGI Y VS+ GQKTGFYADQRE+R  +S +SKD++VLD+CCYSGGFAL+AAKG
Sbjct: 233  GTVKVMENGIVYIVSMEGQKTGFYADQRESRNFVSTLSKDKRVLDLCCYSGGFALSAAKG 292

Query: 647  GAEYVIGIDSSSPALELAEENVRLNKFNPEKISFMRKDATEFMKEAASRQEVWDIVILDP 468
            GA  VIGIDSS  AL+LA EN+ LNK N E+ISF+++DAT FMK A SR EVWD+VILDP
Sbjct: 293  GANNVIGIDSSGSALDLANENILLNKLNAERISFLKEDATAFMKGAISRNEVWDLVILDP 352

Query: 467  PKLAPRRKVLQNASGMYRNLNSLAMKITKKGGLLMTCSCSGAITQSGTFLRILQGAASMA 288
            PKLAPR+KVLQ+ASGMYRNLN+LAM++ K+GGLLMTCSCSGA+TQSG FL+ +QGAASMA
Sbjct: 353  PKLAPRKKVLQSASGMYRNLNALAMQVVKRGGLLMTCSCSGAMTQSGLFLKTIQGAASMA 412

Query: 287  GRKITILRQAGAACDHPIDPSYPEGAYLTNY 195
            GRK+T+LRQAGAACDHPIDP+YPEG YL+NY
Sbjct: 413  GRKVTVLRQAGAACDHPIDPAYPEGQYLSNY 443


>ref|XP_003531813.1| PREDICTED: ribosomal RNA large subunit methyltransferase I-like
            [Glycine max]
          Length = 444

 Score =  570 bits (1468), Expect = e-160
 Identities = 285/390 (73%), Positives = 326/390 (83%), Gaps = 1/390 (0%)
 Frame = -1

Query: 1364 TQIFRDGSPMVYSGAVDRIIGRPPPKTGDIVLVADGLEKPIGWGLYNSVSMFCVRLMQLE 1185
            TQ+F+DG+PMVYSGAVDRIIGRPPPKTGD+VLVADG EKPIGWG+YNSVSMFCVRLMQLE
Sbjct: 49   TQLFKDGNPMVYSGAVDRIIGRPPPKTGDVVLVADGTEKPIGWGMYNSVSMFCVRLMQLE 108

Query: 1184 EEATRDLNCALDMEKLLETRFDAAIELRGSLGLPSVDTTAYRLINSEGDRLSGLIIDVFG 1005
            +EAT D +CAL+MEKL+ETR DAA+E+R  LGLPSV T AYRLINSEGDRLSGLIIDVFG
Sbjct: 109  DEATSDSSCALNMEKLIETRIDAAVEMRRRLGLPSVHTNAYRLINSEGDRLSGLIIDVFG 168

Query: 1004 DXXXXXXXXXXVEQYKSEIELHIRTMKNIKHIKWRPSIDILKEEGLDISDQTDSDSSMLS 825
                       VE+YKSEIE  I+ +  I H+ WRPS+DILKE+G++  D     SS   
Sbjct: 169  GVAVVASSAAWVEKYKSEIEACIKKINYINHVNWRPSVDILKEDGVNEYDLNKMHSSTCP 228

Query: 824  E-VKVMENGICYNVSLAGQKTGFYADQRENRRLISLISKDQKVLDVCCYSGGFALNAAKG 648
            E  K++EN I Y +SL GQKTGFYADQRENR+ IS IS  QKVLD+CCYSGGFALNA +G
Sbjct: 229  ERTKIVENEIVYTISLKGQKTGFYADQRENRQFISRISDGQKVLDICCYSGGFALNAVRG 288

Query: 647  GAEYVIGIDSSSPALELAEENVRLNKFNPEKISFMRKDATEFMKEAASRQEVWDIVILDP 468
            GA  V GID+S  ALELA+ENV LN  +P +ISF+R+DATEFMK A  R E WDIVI+DP
Sbjct: 289  GALNVTGIDTSPLALELAKENVVLNNIDPGRISFLREDATEFMKGALLRNESWDIVIIDP 348

Query: 467  PKLAPRRKVLQNASGMYRNLNSLAMKITKKGGLLMTCSCSGAITQSGTFLRILQGAASMA 288
            PKLAP +KVL +ASGMYRNLNSLAM++TK+GGLLMTCSCSGA+TQSG F+RILQGAASMA
Sbjct: 349  PKLAPTKKVLHSASGMYRNLNSLAMQLTKRGGLLMTCSCSGAVTQSGIFMRILQGAASMA 408

Query: 287  GRKITILRQAGAACDHPIDPSYPEGAYLTN 198
            GR+IT+LRQAGAACDHPIDPSYPEGAYLTN
Sbjct: 409  GRRITVLRQAGAACDHPIDPSYPEGAYLTN 438


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