BLASTX nr result

ID: Dioscorea21_contig00024184 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024184
         (923 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35066.3| unnamed protein product [Vitis vinifera]              192   7e-47
ref|XP_002266804.1| PREDICTED: putative RING-H2 finger protein A...   192   7e-47
ref|XP_002303951.1| predicted protein [Populus trichocarpa] gi|2...   180   4e-43
ref|XP_002299182.1| predicted protein [Populus trichocarpa] gi|2...   173   6e-41
ref|XP_004146803.1| PREDICTED: putative RING-H2 finger protein A...   171   3e-40

>emb|CBI35066.3| unnamed protein product [Vitis vinifera]
          Length = 191

 Score =  192 bits (489), Expect = 7e-47
 Identities = 93/163 (57%), Positives = 108/163 (66%)
 Frame = -2

Query: 619 GVGLGYGIAIAVGILVLVSTIMLASYLCVRVKGRXXXXXXXXXXXXXXXXXXXXXXXXXX 440
           GVGLGYGIAIAV ILVL+STIMLASY CVRVK                            
Sbjct: 12  GVGLGYGIAIAVSILVLISTIMLASYACVRVKASGGTRADHGRPGTNRESTAVDLSELAA 71

Query: 439 XXXTIGLDRPTIESFPKFLFGSQVNLQRPITGPCPICLSEYKPGDAIRCVPECDHCFHAG 260
                GLD P IES+PK + G    L RP  GPC ICLSEY+P + +R +PEC+HCFHA 
Sbjct: 72  VVVVAGLDGPAIESYPKMVLGQSRRLPRPNDGPCSICLSEYRPNETVRSIPECNHCFHAD 131

Query: 259 CVDEWLQVSASCPLCRSSPVPSAASTPLATPLSELIPLAVHAR 131
           C+DEWL++SA+CP+CRSSP  SAA TPLATPLSE++PLA HAR
Sbjct: 132 CIDEWLRMSATCPICRSSPAVSAAPTPLATPLSEVVPLAFHAR 174


>ref|XP_002266804.1| PREDICTED: putative RING-H2 finger protein ATL69-like [Vitis
           vinifera]
          Length = 174

 Score =  192 bits (489), Expect = 7e-47
 Identities = 93/163 (57%), Positives = 108/163 (66%)
 Frame = -2

Query: 619 GVGLGYGIAIAVGILVLVSTIMLASYLCVRVKGRXXXXXXXXXXXXXXXXXXXXXXXXXX 440
           GVGLGYGIAIAV ILVL+STIMLASY CVRVK                            
Sbjct: 12  GVGLGYGIAIAVSILVLISTIMLASYACVRVKASGGTRADHGRPGTNRESTAVDLSELAA 71

Query: 439 XXXTIGLDRPTIESFPKFLFGSQVNLQRPITGPCPICLSEYKPGDAIRCVPECDHCFHAG 260
                GLD P IES+PK + G    L RP  GPC ICLSEY+P + +R +PEC+HCFHA 
Sbjct: 72  VVVVAGLDGPAIESYPKMVLGQSRRLPRPNDGPCSICLSEYRPNETVRSIPECNHCFHAD 131

Query: 259 CVDEWLQVSASCPLCRSSPVPSAASTPLATPLSELIPLAVHAR 131
           C+DEWL++SA+CP+CRSSP  SAA TPLATPLSE++PLA HAR
Sbjct: 132 CIDEWLRMSATCPICRSSPAVSAAPTPLATPLSEVVPLAFHAR 174


>ref|XP_002303951.1| predicted protein [Populus trichocarpa]
           gi|224144358|ref|XP_002336133.1| predicted protein
           [Populus trichocarpa] gi|222841383|gb|EEE78930.1|
           predicted protein [Populus trichocarpa]
           gi|222873819|gb|EEF10950.1| predicted protein [Populus
           trichocarpa]
          Length = 180

 Score =  180 bits (457), Expect = 4e-43
 Identities = 87/168 (51%), Positives = 107/168 (63%), Gaps = 5/168 (2%)
 Frame = -2

Query: 619 GVGLGYGIAIAVGILVLVSTIMLASYLCVRVKGRXXXXXXXXXXXXXXXXXXXXXXXXXX 440
           G GLGYGIAIAV ILVL+STIMLASY C++VKG                           
Sbjct: 13  GSGLGYGIAIAVSILVLISTIMLASYACIKVKGNGFGRNSSSDSGVSDGYGPHRHFTTRD 72

Query: 439 XXXT-----IGLDRPTIESFPKFLFGSQVNLQRPITGPCPICLSEYKPGDAIRCVPECDH 275
                    +GLD P IES+PK + G    L +P  GPC ICLS+Y P D IRC+P C+H
Sbjct: 73  SIELMPVVVVGLDEPIIESYPKMVLGDSRRLPKPNEGPCSICLSDYLPKDTIRCIPYCNH 132

Query: 274 CFHAGCVDEWLQVSASCPLCRSSPVPSAASTPLATPLSELIPLAVHAR 131
           CFHA C+D WL+++A+CPLCR+SP PS  STP+ATPL+E++PLA HAR
Sbjct: 133 CFHADCIDGWLKMNATCPLCRNSPAPSKDSTPVATPLAEVVPLAFHAR 180


>ref|XP_002299182.1| predicted protein [Populus trichocarpa] gi|222846440|gb|EEE83987.1|
           predicted protein [Populus trichocarpa]
          Length = 164

 Score =  173 bits (438), Expect = 6e-41
 Identities = 81/163 (49%), Positives = 102/163 (62%)
 Frame = -2

Query: 619 GVGLGYGIAIAVGILVLVSTIMLASYLCVRVKGRXXXXXXXXXXXXXXXXXXXXXXXXXX 440
           G GLGYGIAIA+GILVL+STIML SY C R+KG                           
Sbjct: 15  GSGLGYGIAIAIGILVLISTIMLTSYACTRIKGNGNGNGSNNNGGEPMTVV--------- 65

Query: 439 XXXTIGLDRPTIESFPKFLFGSQVNLQRPITGPCPICLSEYKPGDAIRCVPECDHCFHAG 260
               +GL  P I+S+ K + G    L +P  GPC ICLS+Y+P D IRC+P+C HCFHA 
Sbjct: 66  ----VGLAEPIIDSYTKMVLGESRRLPKPNEGPCSICLSDYQPKDTIRCIPDCHHCFHAD 121

Query: 259 CVDEWLQVSASCPLCRSSPVPSAASTPLATPLSELIPLAVHAR 131
           C+D WL++SA+CPLCR+SP PS   TP+ TPL+E++P A HAR
Sbjct: 122 CIDGWLKMSATCPLCRNSPAPSKGPTPVTTPLAEVVPSAFHAR 164


>ref|XP_004146803.1| PREDICTED: putative RING-H2 finger protein ATL69-like [Cucumis
           sativus] gi|449516515|ref|XP_004165292.1| PREDICTED:
           putative RING-H2 finger protein ATL69-like [Cucumis
           sativus]
          Length = 163

 Score =  171 bits (432), Expect = 3e-40
 Identities = 84/163 (51%), Positives = 103/163 (63%)
 Frame = -2

Query: 619 GVGLGYGIAIAVGILVLVSTIMLASYLCVRVKGRXXXXXXXXXXXXXXXXXXXXXXXXXX 440
           G+GLGYGIAIAV ILV +ST+ML SY C+RVK                            
Sbjct: 13  GLGLGYGIAIAVSILVFISTVMLISYACIRVKSATTRPSASLPSPPTPVDNVVVLM---- 68

Query: 439 XXXTIGLDRPTIESFPKFLFGSQVNLQRPITGPCPICLSEYKPGDAIRCVPECDHCFHAG 260
               +GL    IES+PK + G    L  P  GPC ICLS+YKP D++RC+P+C HCFH+ 
Sbjct: 69  ----VGLHGSIIESYPKLVLGESRRLPPPNNGPCSICLSDYKPHDSVRCIPDCRHCFHSD 124

Query: 259 CVDEWLQVSASCPLCRSSPVPSAASTPLATPLSELIPLAVHAR 131
           CVD+WL++SA+CPLCR+SP P    TPLATPLSEL+PLA HAR
Sbjct: 125 CVDQWLRMSATCPLCRNSPAP----TPLATPLSELVPLASHAR 163


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