BLASTX nr result

ID: Dioscorea21_contig00024178 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024178
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABB47665.1| retrotransposon protein, putative, unclassified, ...   123   2e-26
ref|NP_001175213.1| Os07g0500000 [Oryza sativa Japonica Group] g...   123   2e-26
ref|XP_003633051.1| PREDICTED: uncharacterized protein LOC100854...    84   9e-15
emb|CAN74794.1| hypothetical protein VITISV_041689 [Vitis vinifera]    84   1e-14
emb|CAN71267.1| hypothetical protein VITISV_017889 [Vitis vinifera]    84   1e-14

>gb|ABB47665.1| retrotransposon protein, putative, unclassified, expressed [Oryza
           sativa Japonica Group] gi|78708691|gb|ABB47666.1|
           retrotransposon protein, putative, unclassified,
           expressed [Oryza sativa Japonica Group]
          Length = 1682

 Score =  123 bits (308), Expect = 2e-26
 Identities = 56/66 (84%), Positives = 60/66 (90%)
 Frame = +3

Query: 6   DHLRVFGCRCFVLLSHRERTKLTAQSVSCVFLGYSLEHKGYRCYDPVTRRIRISRDVTFD 185
           DHLRVFGC C+VLL+ RERTKLTAQSV CVFLGYSLEHKGYRCYDP  RRIRISRDVTFD
Sbjct: 546 DHLRVFGCTCYVLLAPRERTKLTAQSVECVFLGYSLEHKGYRCYDPSARRIRISRDVTFD 605

Query: 186 ESTPFY 203
           E+ PF+
Sbjct: 606 ENKPFF 611


>ref|NP_001175213.1| Os07g0500000 [Oryza sativa Japonica Group]
           gi|255677790|dbj|BAH93941.1| Os07g0500000 [Oryza sativa
           Japonica Group]
          Length = 662

 Score =  123 bits (308), Expect = 2e-26
 Identities = 56/66 (84%), Positives = 60/66 (90%)
 Frame = +3

Query: 6   DHLRVFGCRCFVLLSHRERTKLTAQSVSCVFLGYSLEHKGYRCYDPVTRRIRISRDVTFD 185
           DHLRVFGC C+VLL+ RERTKLTAQSV CVFLGYSLEHKGYRCYDP  RRIRISRDVTFD
Sbjct: 324 DHLRVFGCTCYVLLAPRERTKLTAQSVECVFLGYSLEHKGYRCYDPSARRIRISRDVTFD 383

Query: 186 ESTPFY 203
           E+ PF+
Sbjct: 384 ENKPFF 389


>ref|XP_003633051.1| PREDICTED: uncharacterized protein LOC100854333 [Vitis vinifera]
          Length = 1689

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 39/66 (59%), Positives = 47/66 (71%)
 Frame = +3

Query: 6   DHLRVFGCRCFVLLSHRERTKLTAQSVSCVFLGYSLEHKGYRCYDPVTRRIRISRDVTFD 185
           DHLR+FGC CFV L   ER KL+AQSV C FLGY++  KG+ CYDP   R RISR+V F 
Sbjct: 584 DHLRIFGCECFVHLPPHERHKLSAQSVRCAFLGYNMCQKGFVCYDPKLHRTRISRNVIFF 643

Query: 186 ESTPFY 203
           E+  F+
Sbjct: 644 ENQHFF 649


>emb|CAN74794.1| hypothetical protein VITISV_041689 [Vitis vinifera]
          Length = 845

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 39/66 (59%), Positives = 47/66 (71%)
 Frame = +3

Query: 6   DHLRVFGCRCFVLLSHRERTKLTAQSVSCVFLGYSLEHKGYRCYDPVTRRIRISRDVTFD 185
           DHLR+FGC CFV L   ER KL+AQSV C FLGY++  KG+ CYDP   R RISR+V F 
Sbjct: 694 DHLRIFGCVCFVHLPPHERHKLSAQSVRCAFLGYNMCQKGFVCYDPTLHRTRISRNVIFF 753

Query: 186 ESTPFY 203
           E+  F+
Sbjct: 754 ENQHFF 759


>emb|CAN71267.1| hypothetical protein VITISV_017889 [Vitis vinifera]
          Length = 1576

 Score = 84.0 bits (206), Expect = 1e-14
 Identities = 39/66 (59%), Positives = 47/66 (71%)
 Frame = +3

Query: 6    DHLRVFGCRCFVLLSHRERTKLTAQSVSCVFLGYSLEHKGYRCYDPVTRRIRISRDVTFD 185
            DHLR+FGC CFV L   ER KL+AQSV C FLGY++  KG+ CYDP   R RISR+V F 
Sbjct: 859  DHLRIFGCVCFVHLPPHERHKLSAQSVRCAFLGYNMCQKGFVCYDPTLHRTRISRNVIFF 918

Query: 186  ESTPFY 203
            E+  F+
Sbjct: 919  ENQHFF 924


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