BLASTX nr result

ID: Dioscorea21_contig00024173 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024173
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555525.1| PREDICTED: uncharacterized protein LOC100786...   118   6e-25
ref|XP_002467577.1| hypothetical protein SORBIDRAFT_01g030360 [S...   117   1e-24
ref|XP_002312800.1| predicted protein [Populus trichocarpa] gi|2...   115   4e-24
ref|XP_002328273.1| predicted protein [Populus trichocarpa] gi|2...   115   5e-24
gb|AAM65928.1| unknown [Arabidopsis thaliana]                         113   1e-23

>ref|XP_003555525.1| PREDICTED: uncharacterized protein LOC100786500 [Glycine max]
          Length = 342

 Score =  118 bits (295), Expect = 6e-25
 Identities = 58/106 (54%), Positives = 75/106 (70%)
 Frame = -1

Query: 320 PVLSSPINLFLIWYGHWSPSRQAPIRDFLLSISDSGAGSHPTVSQWWVSTAALYADQTGS 141
           PVLSSPIN++LIWYG W  S++  I+DFL SISD  A   P+VS WW  T +LY DQTG+
Sbjct: 64  PVLSSPINIYLIWYGKWPQSQKLLIKDFLNSISDHRAAPSPSVSDWW-RTVSLYTDQTGA 122

Query: 140 NVTRRIALAREISFPAAPRGTSLTRLTVQQIIADAVTAGSLPIDHR 3
           N++R +++A E S      GT LTRL+VQ++IA AV A   P+DHR
Sbjct: 123 NISRSVSIAGEYSDLRYSHGTHLTRLSVQEVIATAVQAKPFPVDHR 168


>ref|XP_002467577.1| hypothetical protein SORBIDRAFT_01g030360 [Sorghum bicolor]
           gi|241921431|gb|EER94575.1| hypothetical protein
           SORBIDRAFT_01g030360 [Sorghum bicolor]
          Length = 330

 Score =  117 bits (293), Expect = 1e-24
 Identities = 60/107 (56%), Positives = 79/107 (73%), Gaps = 1/107 (0%)
 Frame = -1

Query: 320 PVLSS-PINLFLIWYGHWSPSRQAPIRDFLLSISDSGAGSHPTVSQWWVSTAALYADQTG 144
           PVLS+ P+ L+++WYG W P+ QAP+RDFLLS+SD      P+V+ WW +TAALYADQT 
Sbjct: 56  PVLSAAPLRLYVLWYGRWDPAHQAPVRDFLLSLSDPSP-PQPSVADWW-ATAALYADQTL 113

Query: 143 SNVTRRIALAREISFPAAPRGTSLTRLTVQQIIADAVTAGSLPIDHR 3
           +NVTRR+ALA E +  +A  G SL+RL +Q ++A AV AG LP D R
Sbjct: 114 ANVTRRVALAGEAADESASLGRSLSRLDIQCVLASAVAAGRLPADAR 160


>ref|XP_002312800.1| predicted protein [Populus trichocarpa] gi|222849208|gb|EEE86755.1|
           predicted protein [Populus trichocarpa]
          Length = 299

 Score =  115 bits (288), Expect = 4e-24
 Identities = 57/107 (53%), Positives = 77/107 (71%), Gaps = 1/107 (0%)
 Frame = -1

Query: 320 PVLSS-PINLFLIWYGHWSPSRQAPIRDFLLSISDSGAGSHPTVSQWWVSTAALYADQTG 144
           PVLSS PIN++LIWYG W+ S++  I+DFL SIS +   + P+VS+WW  T +LY DQTG
Sbjct: 20  PVLSSTPINIYLIWYGRWANSQKLLIKDFLNSISPTTVAAKPSVSEWW-RTVSLYTDQTG 78

Query: 143 SNVTRRIALAREISFPAAPRGTSLTRLTVQQIIADAVTAGSLPIDHR 3
           +NV+R I +A E +  A   GT LTRLT+QQ+IA AV +   P+DH+
Sbjct: 79  ANVSRSILIAGEYTDSAYSHGTGLTRLTIQQVIASAVKSAPFPVDHK 125


>ref|XP_002328273.1| predicted protein [Populus trichocarpa] gi|222837788|gb|EEE76153.1|
           predicted protein [Populus trichocarpa]
          Length = 317

 Score =  115 bits (287), Expect = 5e-24
 Identities = 57/107 (53%), Positives = 76/107 (71%), Gaps = 1/107 (0%)
 Frame = -1

Query: 320 PVLSS-PINLFLIWYGHWSPSRQAPIRDFLLSISDSGAGSHPTVSQWWVSTAALYADQTG 144
           PVLSS PIN++LIWYG W+ S++  I+DF+ SIS S   + P+VS WW  T +LY DQTG
Sbjct: 38  PVLSSAPINIYLIWYGRWANSQKLLIKDFINSISPSTVAAKPSVSDWW-RTVSLYTDQTG 96

Query: 143 SNVTRRIALAREISFPAAPRGTSLTRLTVQQIIADAVTAGSLPIDHR 3
           +NV+R I +A E +  A   GT LTRLT+QQ+IA AV +   P+DH+
Sbjct: 97  ANVSRSILIAGEYADSAYSHGTGLTRLTIQQVIASAVRSAPFPVDHK 143


>gb|AAM65928.1| unknown [Arabidopsis thaliana]
          Length = 365

 Score =  113 bits (283), Expect = 1e-23
 Identities = 59/107 (55%), Positives = 77/107 (71%), Gaps = 1/107 (0%)
 Frame = -1

Query: 320 PVLSS-PINLFLIWYGHWSPSRQAPIRDFLLSISDSGAGSHPTVSQWWVSTAALYADQTG 144
           PVLSS PIN+++IWYG WS   ++ IRDFL SISD+ A S P+VS+WW  TA+LY DQTG
Sbjct: 87  PVLSSSPINIYVIWYGQWSRPHKSLIRDFLNSISDAKAPS-PSVSEWW-RTASLYTDQTG 144

Query: 143 SNVTRRIALAREISFPAAPRGTSLTRLTVQQIIADAVTAGSLPIDHR 3
           SNV+R + +A E S      G  LTRLT+Q++IA A  + S P+DH+
Sbjct: 145 SNVSRSVLIAGEYSDSKYSHGQHLTRLTIQEVIASAARSASFPVDHK 191


Top