BLASTX nr result

ID: Dioscorea21_contig00024170 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024170
         (635 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA36278.1| TPA: putative RING zinc finger domain superfamil...   128   8e-28
ref|XP_002454457.1| hypothetical protein SORBIDRAFT_04g031430 [S...   128   8e-28
ref|NP_001151920.1| RING-H2 finger protein ATL3J [Zea mays] gi|1...   128   8e-28
dbj|BAJ87480.1| predicted protein [Hordeum vulgare subsp. vulgare]    127   2e-27
ref|NP_001130589.1| uncharacterized protein LOC100191688 [Zea ma...   127   2e-27

>tpg|DAA36278.1| TPA: putative RING zinc finger domain superfamily protein [Zea
           mays]
          Length = 397

 Score =  128 bits (322), Expect = 8e-28
 Identities = 56/75 (74%), Positives = 67/75 (89%)
 Frame = -1

Query: 482 DPKTLIQSLPLFTLASSMASIPKSSPDCAVCLSPFRPDDELRLLPACHHAFHAACIDAWL 303
           + + LI SLPLFT+AS++A++PKSSPDCAVCLSPF PD +LRLLPAC HAFHAAC+DAWL
Sbjct: 120 EKQRLIDSLPLFTMASALAALPKSSPDCAVCLSPFTPDADLRLLPACRHAFHAACVDAWL 179

Query: 302 PSTPSCPLCRAAVVI 258
            +TPSCPLCRAAV +
Sbjct: 180 RTTPSCPLCRAAVAL 194


>ref|XP_002454457.1| hypothetical protein SORBIDRAFT_04g031430 [Sorghum bicolor]
           gi|241934288|gb|EES07433.1| hypothetical protein
           SORBIDRAFT_04g031430 [Sorghum bicolor]
          Length = 400

 Score =  128 bits (322), Expect = 8e-28
 Identities = 57/73 (78%), Positives = 66/73 (90%)
 Frame = -1

Query: 482 DPKTLIQSLPLFTLASSMASIPKSSPDCAVCLSPFRPDDELRLLPACHHAFHAACIDAWL 303
           + + LI SLPLFT+AS++A++PKSSPDCAVCLSPF PD ELRLLPAC HAFHAAC+DAWL
Sbjct: 124 EKERLIASLPLFTMASALAALPKSSPDCAVCLSPFSPDAELRLLPACRHAFHAACVDAWL 183

Query: 302 PSTPSCPLCRAAV 264
            +TPSCPLCRAAV
Sbjct: 184 RTTPSCPLCRAAV 196


>ref|NP_001151920.1| RING-H2 finger protein ATL3J [Zea mays] gi|195651079|gb|ACG45007.1|
           RING-H2 finger protein ATL3J [Zea mays]
          Length = 397

 Score =  128 bits (322), Expect = 8e-28
 Identities = 56/75 (74%), Positives = 67/75 (89%)
 Frame = -1

Query: 482 DPKTLIQSLPLFTLASSMASIPKSSPDCAVCLSPFRPDDELRLLPACHHAFHAACIDAWL 303
           + + LI SLPLFT+AS++A++PKSSPDCAVCLSPF PD +LRLLPAC HAFHAAC+DAWL
Sbjct: 118 EKQRLIDSLPLFTMASALAALPKSSPDCAVCLSPFTPDADLRLLPACRHAFHAACVDAWL 177

Query: 302 PSTPSCPLCRAAVVI 258
            +TPSCPLCRAAV +
Sbjct: 178 RTTPSCPLCRAAVAL 192


>dbj|BAJ87480.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 373

 Score =  127 bits (319), Expect = 2e-27
 Identities = 56/73 (76%), Positives = 66/73 (90%)
 Frame = -1

Query: 482 DPKTLIQSLPLFTLASSMASIPKSSPDCAVCLSPFRPDDELRLLPACHHAFHAACIDAWL 303
           + + LI SLPLFT+AS++A++PKSSPDCAVCLSPF PD ELRLLPAC HAFHAAC+DAWL
Sbjct: 124 EKERLIASLPLFTMASALAALPKSSPDCAVCLSPFVPDAELRLLPACRHAFHAACVDAWL 183

Query: 302 PSTPSCPLCRAAV 264
            +TPSCPLCRAA+
Sbjct: 184 RNTPSCPLCRAAI 196


>ref|NP_001130589.1| uncharacterized protein LOC100191688 [Zea mays]
           gi|194689566|gb|ACF78867.1| unknown [Zea mays]
           gi|194707760|gb|ACF87964.1| unknown [Zea mays]
           gi|413938299|gb|AFW72850.1| putative RING zinc finger
           domain superfamily protein [Zea mays]
          Length = 378

 Score =  127 bits (319), Expect = 2e-27
 Identities = 56/73 (76%), Positives = 66/73 (90%)
 Frame = -1

Query: 482 DPKTLIQSLPLFTLASSMASIPKSSPDCAVCLSPFRPDDELRLLPACHHAFHAACIDAWL 303
           + + LI SLPLFT+AS++A++PKSSPDCAVCLSPF PD +LRLLPAC HAFHAAC+DAWL
Sbjct: 117 EKERLIASLPLFTMASALAALPKSSPDCAVCLSPFSPDADLRLLPACRHAFHAACVDAWL 176

Query: 302 PSTPSCPLCRAAV 264
            +TPSCPLCRAAV
Sbjct: 177 RTTPSCPLCRAAV 189


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