BLASTX nr result
ID: Dioscorea21_contig00024170
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Dioscorea21_contig00024170 (635 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value tpg|DAA36278.1| TPA: putative RING zinc finger domain superfamil... 128 8e-28 ref|XP_002454457.1| hypothetical protein SORBIDRAFT_04g031430 [S... 128 8e-28 ref|NP_001151920.1| RING-H2 finger protein ATL3J [Zea mays] gi|1... 128 8e-28 dbj|BAJ87480.1| predicted protein [Hordeum vulgare subsp. vulgare] 127 2e-27 ref|NP_001130589.1| uncharacterized protein LOC100191688 [Zea ma... 127 2e-27 >tpg|DAA36278.1| TPA: putative RING zinc finger domain superfamily protein [Zea mays] Length = 397 Score = 128 bits (322), Expect = 8e-28 Identities = 56/75 (74%), Positives = 67/75 (89%) Frame = -1 Query: 482 DPKTLIQSLPLFTLASSMASIPKSSPDCAVCLSPFRPDDELRLLPACHHAFHAACIDAWL 303 + + LI SLPLFT+AS++A++PKSSPDCAVCLSPF PD +LRLLPAC HAFHAAC+DAWL Sbjct: 120 EKQRLIDSLPLFTMASALAALPKSSPDCAVCLSPFTPDADLRLLPACRHAFHAACVDAWL 179 Query: 302 PSTPSCPLCRAAVVI 258 +TPSCPLCRAAV + Sbjct: 180 RTTPSCPLCRAAVAL 194 >ref|XP_002454457.1| hypothetical protein SORBIDRAFT_04g031430 [Sorghum bicolor] gi|241934288|gb|EES07433.1| hypothetical protein SORBIDRAFT_04g031430 [Sorghum bicolor] Length = 400 Score = 128 bits (322), Expect = 8e-28 Identities = 57/73 (78%), Positives = 66/73 (90%) Frame = -1 Query: 482 DPKTLIQSLPLFTLASSMASIPKSSPDCAVCLSPFRPDDELRLLPACHHAFHAACIDAWL 303 + + LI SLPLFT+AS++A++PKSSPDCAVCLSPF PD ELRLLPAC HAFHAAC+DAWL Sbjct: 124 EKERLIASLPLFTMASALAALPKSSPDCAVCLSPFSPDAELRLLPACRHAFHAACVDAWL 183 Query: 302 PSTPSCPLCRAAV 264 +TPSCPLCRAAV Sbjct: 184 RTTPSCPLCRAAV 196 >ref|NP_001151920.1| RING-H2 finger protein ATL3J [Zea mays] gi|195651079|gb|ACG45007.1| RING-H2 finger protein ATL3J [Zea mays] Length = 397 Score = 128 bits (322), Expect = 8e-28 Identities = 56/75 (74%), Positives = 67/75 (89%) Frame = -1 Query: 482 DPKTLIQSLPLFTLASSMASIPKSSPDCAVCLSPFRPDDELRLLPACHHAFHAACIDAWL 303 + + LI SLPLFT+AS++A++PKSSPDCAVCLSPF PD +LRLLPAC HAFHAAC+DAWL Sbjct: 118 EKQRLIDSLPLFTMASALAALPKSSPDCAVCLSPFTPDADLRLLPACRHAFHAACVDAWL 177 Query: 302 PSTPSCPLCRAAVVI 258 +TPSCPLCRAAV + Sbjct: 178 RTTPSCPLCRAAVAL 192 >dbj|BAJ87480.1| predicted protein [Hordeum vulgare subsp. vulgare] Length = 373 Score = 127 bits (319), Expect = 2e-27 Identities = 56/73 (76%), Positives = 66/73 (90%) Frame = -1 Query: 482 DPKTLIQSLPLFTLASSMASIPKSSPDCAVCLSPFRPDDELRLLPACHHAFHAACIDAWL 303 + + LI SLPLFT+AS++A++PKSSPDCAVCLSPF PD ELRLLPAC HAFHAAC+DAWL Sbjct: 124 EKERLIASLPLFTMASALAALPKSSPDCAVCLSPFVPDAELRLLPACRHAFHAACVDAWL 183 Query: 302 PSTPSCPLCRAAV 264 +TPSCPLCRAA+ Sbjct: 184 RNTPSCPLCRAAI 196 >ref|NP_001130589.1| uncharacterized protein LOC100191688 [Zea mays] gi|194689566|gb|ACF78867.1| unknown [Zea mays] gi|194707760|gb|ACF87964.1| unknown [Zea mays] gi|413938299|gb|AFW72850.1| putative RING zinc finger domain superfamily protein [Zea mays] Length = 378 Score = 127 bits (319), Expect = 2e-27 Identities = 56/73 (76%), Positives = 66/73 (90%) Frame = -1 Query: 482 DPKTLIQSLPLFTLASSMASIPKSSPDCAVCLSPFRPDDELRLLPACHHAFHAACIDAWL 303 + + LI SLPLFT+AS++A++PKSSPDCAVCLSPF PD +LRLLPAC HAFHAAC+DAWL Sbjct: 117 EKERLIASLPLFTMASALAALPKSSPDCAVCLSPFSPDADLRLLPACRHAFHAACVDAWL 176 Query: 302 PSTPSCPLCRAAV 264 +TPSCPLCRAAV Sbjct: 177 RTTPSCPLCRAAV 189