BLASTX nr result

ID: Dioscorea21_contig00024169 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024169
         (1345 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003568985.1| PREDICTED: peptide chain release factor 1-li...   536   e-150
ref|XP_002440546.1| hypothetical protein SORBIDRAFT_09g002890 [S...   535   e-150
gb|AFW57522.1| peptide chain release factor 1 [Zea mays]              535   e-149
ref|NP_001142228.1| uncharacterized protein LOC100274396 [Zea ma...   535   e-149
ref|NP_001241798.1| peptide chain release factor 1 [Zea mays] gi...   529   e-148

>ref|XP_003568985.1| PREDICTED: peptide chain release factor 1-like [Brachypodium
            distachyon]
          Length = 417

 Score =  536 bits (1381), Expect = e-150
 Identities = 273/365 (74%), Positives = 313/365 (85%)
 Frame = -1

Query: 1207 EISRDIMKIVEQRMVEIERRNAYLLEQINQPAVTAAEYSRSNKELRRLESCMELIKELRS 1028
            ++  ++++I+EQRM  IE+R+AYL EQINQPA +  EYSR+NKE  +LES MELIKEL+S
Sbjct: 53   QLPANLVQIMEQRMKLIEQRSAYLQEQINQPAASPEEYSRANKEFHKLESTMELIKELQS 112

Query: 1027 KGKEIDSLKSLISDSPEDKEMRDMATEEFDVAVEEQXXXXXXXXXXXXXXXXXXXXDCIL 848
            K KEI+ LKSL+++S E+K+MR+MA EE   A+EE+                    DCIL
Sbjct: 113  KQKEIEGLKSLVTNSVEEKDMREMAAEELLEAIEEEKQLQHGLFRTLLPKDEADERDCIL 172

Query: 847  EVRAGTGGEEASLFAMDIFKMYEKYSQKKGWKFEVVDIMESDLKGFREASGSISGPGAYG 668
            EVRAGTGGEEASLFAMDIFKMYEKYSQK GWKF+V+D+MES  KG++EASG+ISGPGAYG
Sbjct: 173  EVRAGTGGEEASLFAMDIFKMYEKYSQKNGWKFDVLDLMESVSKGYKEASGTISGPGAYG 232

Query: 667  KLKFESGIHRVQRIPVTEKSGRIHTSAVSVAILPQADEVDVHLRNEDLKIDTYRAGGCGG 488
            KLKFESG+HRVQR+PVTEKSGR+HTSAVSVA+LPQADEVDV LRNEDL+IDTYR+GG GG
Sbjct: 233  KLKFESGVHRVQRVPVTEKSGRVHTSAVSVAVLPQADEVDVQLRNEDLRIDTYRSGGSGG 292

Query: 487  QSVNTTNSAVRITHIPTGMTVAIQDERSQHMNKAKALKVLRARLYEAERSRLQMSRSKLR 308
            QSVNTT+SAVRITH+PTG  VAIQDERSQH NKAKALKVLRARLYE ER RL   RSKLR
Sbjct: 293  QSVNTTDSAVRITHVPTGTVVAIQDERSQHQNKAKALKVLRARLYEMERHRLHADRSKLR 352

Query: 307  MEQIGSGDRSERIRTYNFPQGRVTDHRVGITNHSIEDVMEGESLDVFIDALLLQEEMEAI 128
             EQIGSGDRSERIRTYNFPQGRVTDHRVGIT+HSIEDVMEGESLDVFIDALLLQEEM+AI
Sbjct: 353  SEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHSIEDVMEGESLDVFIDALLLQEEMDAI 412

Query: 127  ASFST 113
            ASF++
Sbjct: 413  ASFTS 417


>ref|XP_002440546.1| hypothetical protein SORBIDRAFT_09g002890 [Sorghum bicolor]
            gi|241945831|gb|EES18976.1| hypothetical protein
            SORBIDRAFT_09g002890 [Sorghum bicolor]
          Length = 416

 Score =  535 bits (1379), Expect = e-150
 Identities = 273/363 (75%), Positives = 313/363 (86%)
 Frame = -1

Query: 1207 EISRDIMKIVEQRMVEIERRNAYLLEQINQPAVTAAEYSRSNKELRRLESCMELIKELRS 1028
            ++  ++++I+EQRM  IE+R+AYL EQINQPA +  EYSR+NKE R+LES MELIKELRS
Sbjct: 52   QLPANLVQIMEQRMKLIEQRSAYLQEQINQPAASPEEYSRANKEFRKLESTMELIKELRS 111

Query: 1027 KGKEIDSLKSLISDSPEDKEMRDMATEEFDVAVEEQXXXXXXXXXXXXXXXXXXXXDCIL 848
            K +EI+ LKSL++++ E+K+MR+MA EE   AVE +                    DCIL
Sbjct: 112  KREEIEGLKSLVTNAREEKDMREMAAEELLEAVEVEKRLQHELFRSLLPKDEADERDCIL 171

Query: 847  EVRAGTGGEEASLFAMDIFKMYEKYSQKKGWKFEVVDIMESDLKGFREASGSISGPGAYG 668
            EVRAGTGGEEASLFAMDIF+MYEKY+QK GWKF+V+DIMES +KG++EASG+ISGPGA+G
Sbjct: 172  EVRAGTGGEEASLFAMDIFRMYEKYAQKNGWKFDVIDIMESAVKGYKEASGTISGPGAFG 231

Query: 667  KLKFESGIHRVQRIPVTEKSGRIHTSAVSVAILPQADEVDVHLRNEDLKIDTYRAGGCGG 488
            KLKFESGIHRVQR+PVTEKSGR+HTSAVSVA+LPQADEVDV LRNEDL+IDTYR+GG GG
Sbjct: 232  KLKFESGIHRVQRVPVTEKSGRVHTSAVSVAVLPQADEVDVQLRNEDLRIDTYRSGGSGG 291

Query: 487  QSVNTTNSAVRITHIPTGMTVAIQDERSQHMNKAKALKVLRARLYEAERSRLQMSRSKLR 308
            QSVNTT+SAVRITHIPTG  VAIQDERSQHMNKAKALKVLRARLYE ER RL M RSKLR
Sbjct: 292  QSVNTTDSAVRITHIPTGTVVAIQDERSQHMNKAKALKVLRARLYELERHRLHMDRSKLR 351

Query: 307  MEQIGSGDRSERIRTYNFPQGRVTDHRVGITNHSIEDVMEGESLDVFIDALLLQEEMEAI 128
             EQIGSGDRSERIRTYNFPQGRVTDHRVGIT+HSI DVMEGESLDVF+DALLLQEEM+AI
Sbjct: 352  SEQIGSGDRSERIRTYNFPQGRVTDHRVGITHHSIADVMEGESLDVFVDALLLQEEMDAI 411

Query: 127  ASF 119
            ASF
Sbjct: 412  ASF 414


>gb|AFW57522.1| peptide chain release factor 1 [Zea mays]
          Length = 368

 Score =  535 bits (1377), Expect = e-149
 Identities = 271/363 (74%), Positives = 313/363 (86%)
 Frame = -1

Query: 1207 EISRDIMKIVEQRMVEIERRNAYLLEQINQPAVTAAEYSRSNKELRRLESCMELIKELRS 1028
            ++  ++++I+EQRM  IE+R+AYL EQINQPA +  EYSR+NKE R+LES MELIK+LRS
Sbjct: 4    QLPANLVEIMEQRMKLIEQRSAYLQEQINQPAASPEEYSRANKEFRKLESTMELIKDLRS 63

Query: 1027 KGKEIDSLKSLISDSPEDKEMRDMATEEFDVAVEEQXXXXXXXXXXXXXXXXXXXXDCIL 848
            K +EI+ LKSL+++  E+K+MR+MA EE  VAVEE+                    DCIL
Sbjct: 64   KQEEIEGLKSLVANDHEEKDMREMAEEELLVAVEEEKRLQHELFRSLLPKDEADEKDCIL 123

Query: 847  EVRAGTGGEEASLFAMDIFKMYEKYSQKKGWKFEVVDIMESDLKGFREASGSISGPGAYG 668
            EVRAGTGGEEASLFAMDIF+MYEKY+QK GWKF+V+DIMES +KG++EASG+ISGPGA+G
Sbjct: 124  EVRAGTGGEEASLFAMDIFRMYEKYAQKNGWKFDVIDIMESAVKGYKEASGTISGPGAFG 183

Query: 667  KLKFESGIHRVQRIPVTEKSGRIHTSAVSVAILPQADEVDVHLRNEDLKIDTYRAGGCGG 488
            KLKFESGIHRVQR+P TEKSGR+HTSAVSVA+LPQADEVDV LRNEDL+IDTYR+GG GG
Sbjct: 184  KLKFESGIHRVQRVPATEKSGRMHTSAVSVAVLPQADEVDVQLRNEDLRIDTYRSGGSGG 243

Query: 487  QSVNTTNSAVRITHIPTGMTVAIQDERSQHMNKAKALKVLRARLYEAERSRLQMSRSKLR 308
            QSVNTT+SAVRITHIPTG  VAIQDERSQHMNKAKALKVLRARLYE ER RL M RSKLR
Sbjct: 244  QSVNTTDSAVRITHIPTGTVVAIQDERSQHMNKAKALKVLRARLYELERRRLHMDRSKLR 303

Query: 307  MEQIGSGDRSERIRTYNFPQGRVTDHRVGITNHSIEDVMEGESLDVFIDALLLQEEMEAI 128
             EQIGSGDRSERIRTYNFPQGRVTDHRVG+T+HSI DVMEGESLD+F+DALLLQEEM+AI
Sbjct: 304  SEQIGSGDRSERIRTYNFPQGRVTDHRVGVTHHSIADVMEGESLDMFVDALLLQEEMDAI 363

Query: 127  ASF 119
            ASF
Sbjct: 364  ASF 366


>ref|NP_001142228.1| uncharacterized protein LOC100274396 [Zea mays]
            gi|194707706|gb|ACF87937.1| unknown [Zea mays]
            gi|413917591|gb|AFW57523.1| peptide chain release factor
            1 [Zea mays]
          Length = 416

 Score =  535 bits (1377), Expect = e-149
 Identities = 271/363 (74%), Positives = 313/363 (86%)
 Frame = -1

Query: 1207 EISRDIMKIVEQRMVEIERRNAYLLEQINQPAVTAAEYSRSNKELRRLESCMELIKELRS 1028
            ++  ++++I+EQRM  IE+R+AYL EQINQPA +  EYSR+NKE R+LES MELIK+LRS
Sbjct: 52   QLPANLVEIMEQRMKLIEQRSAYLQEQINQPAASPEEYSRANKEFRKLESTMELIKDLRS 111

Query: 1027 KGKEIDSLKSLISDSPEDKEMRDMATEEFDVAVEEQXXXXXXXXXXXXXXXXXXXXDCIL 848
            K +EI+ LKSL+++  E+K+MR+MA EE  VAVEE+                    DCIL
Sbjct: 112  KQEEIEGLKSLVANDHEEKDMREMAEEELLVAVEEEKRLQHELFRSLLPKDEADEKDCIL 171

Query: 847  EVRAGTGGEEASLFAMDIFKMYEKYSQKKGWKFEVVDIMESDLKGFREASGSISGPGAYG 668
            EVRAGTGGEEASLFAMDIF+MYEKY+QK GWKF+V+DIMES +KG++EASG+ISGPGA+G
Sbjct: 172  EVRAGTGGEEASLFAMDIFRMYEKYAQKNGWKFDVIDIMESAVKGYKEASGTISGPGAFG 231

Query: 667  KLKFESGIHRVQRIPVTEKSGRIHTSAVSVAILPQADEVDVHLRNEDLKIDTYRAGGCGG 488
            KLKFESGIHRVQR+P TEKSGR+HTSAVSVA+LPQADEVDV LRNEDL+IDTYR+GG GG
Sbjct: 232  KLKFESGIHRVQRVPATEKSGRMHTSAVSVAVLPQADEVDVQLRNEDLRIDTYRSGGSGG 291

Query: 487  QSVNTTNSAVRITHIPTGMTVAIQDERSQHMNKAKALKVLRARLYEAERSRLQMSRSKLR 308
            QSVNTT+SAVRITHIPTG  VAIQDERSQHMNKAKALKVLRARLYE ER RL M RSKLR
Sbjct: 292  QSVNTTDSAVRITHIPTGTVVAIQDERSQHMNKAKALKVLRARLYELERRRLHMDRSKLR 351

Query: 307  MEQIGSGDRSERIRTYNFPQGRVTDHRVGITNHSIEDVMEGESLDVFIDALLLQEEMEAI 128
             EQIGSGDRSERIRTYNFPQGRVTDHRVG+T+HSI DVMEGESLD+F+DALLLQEEM+AI
Sbjct: 352  SEQIGSGDRSERIRTYNFPQGRVTDHRVGVTHHSIADVMEGESLDMFVDALLLQEEMDAI 411

Query: 127  ASF 119
            ASF
Sbjct: 412  ASF 414


>ref|NP_001241798.1| peptide chain release factor 1 [Zea mays] gi|195650889|gb|ACG44912.1|
            peptide chain release factor 1 [Zea mays]
          Length = 356

 Score =  529 bits (1363), Expect = e-148
 Identities = 269/354 (75%), Positives = 306/354 (86%)
 Frame = -1

Query: 1180 VEQRMVEIERRNAYLLEQINQPAVTAAEYSRSNKELRRLESCMELIKELRSKGKEIDSLK 1001
            +EQRM  IE+R+AYL EQINQPA +  EYSR+NKE R+LES MELIK+LRSK +EI+ LK
Sbjct: 1    MEQRMKLIEQRSAYLQEQINQPAASPEEYSRANKEFRKLESTMELIKDLRSKQEEIEGLK 60

Query: 1000 SLISDSPEDKEMRDMATEEFDVAVEEQXXXXXXXXXXXXXXXXXXXXDCILEVRAGTGGE 821
            SL+++  E+K+MR+MA EE  VAVEE+                    DCILEVRAGTGGE
Sbjct: 61   SLVANDHEEKDMREMAEEELLVAVEEEKRLQHELFRSLLPKDEADEKDCILEVRAGTGGE 120

Query: 820  EASLFAMDIFKMYEKYSQKKGWKFEVVDIMESDLKGFREASGSISGPGAYGKLKFESGIH 641
            EASLFAMDIF+MYEKY+QK GWKF+V+DIMES +KG++EASG+ISGPGA+GKLKFESGIH
Sbjct: 121  EASLFAMDIFRMYEKYAQKNGWKFDVIDIMESAVKGYKEASGTISGPGAFGKLKFESGIH 180

Query: 640  RVQRIPVTEKSGRIHTSAVSVAILPQADEVDVHLRNEDLKIDTYRAGGCGGQSVNTTNSA 461
            RVQR+P TEKSGR+HTSAVSVA+LPQADEVDV LRNEDL+IDTYR+GG GGQSVNTT+SA
Sbjct: 181  RVQRVPATEKSGRMHTSAVSVAVLPQADEVDVQLRNEDLRIDTYRSGGSGGQSVNTTDSA 240

Query: 460  VRITHIPTGMTVAIQDERSQHMNKAKALKVLRARLYEAERSRLQMSRSKLRMEQIGSGDR 281
            VRITHIPTG  VAIQDERSQHMNKAKALKVLRARLYE ER RL M RSKLR EQIGSGDR
Sbjct: 241  VRITHIPTGTVVAIQDERSQHMNKAKALKVLRARLYELERRRLHMDRSKLRSEQIGSGDR 300

Query: 280  SERIRTYNFPQGRVTDHRVGITNHSIEDVMEGESLDVFIDALLLQEEMEAIASF 119
            SERIRTYNFPQGRVTDHRVG+T+HSI DVMEGESLD+F+DALLLQEEM+AI+SF
Sbjct: 301  SERIRTYNFPQGRVTDHRVGVTHHSIADVMEGESLDMFVDALLLQEEMDAISSF 354


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