BLASTX nr result

ID: Dioscorea21_contig00024157 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024157
         (440 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ90173.1| predicted protein [Hordeum vulgare subsp. vulgar...    79   3e-13
emb|CBI22262.3| unnamed protein product [Vitis vinifera]               79   3e-13
ref|XP_002278808.1| PREDICTED: uncharacterized protein LOC100245...    79   3e-13
ref|XP_002512135.1| conserved hypothetical protein [Ricinus comm...    74   1e-11
gb|EEC83877.1| hypothetical protein OsI_29876 [Oryza sativa Indi...    73   3e-11

>dbj|BAJ90173.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326516336|dbj|BAJ92323.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 568

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 47/106 (44%), Positives = 62/106 (58%), Gaps = 3/106 (2%)
 Frame = -1

Query: 311 MGACVSTSNXXXXXXXXXXXXXKCHGRVSASSIPGTPKGKSGRNGNCTADFALSELHVET 132
           MGACVS+S                 G+V    +  TP  +    GNC A   +  +HVET
Sbjct: 1   MGACVSSSRRRKPQRLRFIYR---RGKV----LRNTPMIRPSDVGNCAASGEV--VHVET 51

Query: 131 AGTSRRISEVSNLTFHLTQLQWHHTQM---NANGLCQEEAWFDSVS 3
           +  +RR S+ SN+TFHLTQLQWHH+++   N + +CQEEAWFDSVS
Sbjct: 52  SAATRRKSDGSNVTFHLTQLQWHHSELESENGSVVCQEEAWFDSVS 97


>emb|CBI22262.3| unnamed protein product [Vitis vinifera]
          Length = 558

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 50/108 (46%), Positives = 65/108 (60%), Gaps = 5/108 (4%)
 Frame = -1

Query: 311 MGACVST-SNXXXXXXXXXXXXXKCHGRVSASSIPGTPKGKSGRNGNCTADFALSE-LHV 138
           MG CVST +              K HG++S S   G  K  S    + T DFA+SE +H+
Sbjct: 1   MGGCVSTPARGPKPRRKYRHRFGKRHGKISTSITDGIKKRNSDAGPHVT-DFAVSEFVHM 59

Query: 137 ET---AGTSRRISEVSNLTFHLTQLQWHHTQMNANGLCQEEAWFDSVS 3
           +    A T+ R SEVSN TFHLTQLQW+H+ ++AN +C EEAWFD+VS
Sbjct: 60  DFDKGATTTCRRSEVSNSTFHLTQLQWYHSPIDANVICPEEAWFDTVS 107


>ref|XP_002278808.1| PREDICTED: uncharacterized protein LOC100245770 [Vitis vinifera]
          Length = 564

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 50/108 (46%), Positives = 65/108 (60%), Gaps = 5/108 (4%)
 Frame = -1

Query: 311 MGACVST-SNXXXXXXXXXXXXXKCHGRVSASSIPGTPKGKSGRNGNCTADFALSE-LHV 138
           MG CVST +              K HG++S S   G  K  S    + T DFA+SE +H+
Sbjct: 1   MGGCVSTPARGPKPRRKYRHRFGKRHGKISTSITDGIKKRNSDAGPHVT-DFAVSEFVHM 59

Query: 137 ET---AGTSRRISEVSNLTFHLTQLQWHHTQMNANGLCQEEAWFDSVS 3
           +    A T+ R SEVSN TFHLTQLQW+H+ ++AN +C EEAWFD+VS
Sbjct: 60  DFDKGATTTCRRSEVSNSTFHLTQLQWYHSPIDANVICPEEAWFDTVS 107


>ref|XP_002512135.1| conserved hypothetical protein [Ricinus communis]
           gi|223549315|gb|EEF50804.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 513

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 43/107 (40%), Positives = 58/107 (54%), Gaps = 4/107 (3%)
 Frame = -1

Query: 311 MGACVSTSNXXXXXXXXXXXXXKCHGRVSASSIPGTPKGKSGRNGNCTADFALSE-LHVE 135
           MG CVST+N               H    ++S+P  P  +    G    DFA+ E +H++
Sbjct: 1   MGGCVSTANKKTRSHRKRHLKFTNHRGKISTSVPDVPMKRFSDAG--LGDFAVREFVHLD 58

Query: 134 T---AGTSRRISEVSNLTFHLTQLQWHHTQMNANGLCQEEAWFDSVS 3
               A T+ R SE +N   H TQLQW+H+Q+  NG+CQEE WFDSVS
Sbjct: 59  FEKGAATTCRRSEATNKNIHHTQLQWNHSQIAGNGICQEEVWFDSVS 105


>gb|EEC83877.1| hypothetical protein OsI_29876 [Oryza sativa Indica Group]
          Length = 542

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 43/105 (40%), Positives = 59/105 (56%), Gaps = 2/105 (1%)
 Frame = -1

Query: 311 MGACVSTSNXXXXXXXXXXXXXKCHGRVSASSI-PGTPKGKSGRNGNCTADFALSEL-HV 138
           MG+C S S                  R ++ SI P  PK +   +     DF++SE+ H 
Sbjct: 1   MGSCASKSVIEQRPPARHYTRKGRRARTNSRSIMPEAPKSRLNDSRGHMTDFSMSEVVHF 60

Query: 137 ETAGTSRRISEVSNLTFHLTQLQWHHTQMNANGLCQEEAWFDSVS 3
           ET+    + SE S  TFHLTQ+QWHH+Q ++NG C+E+AWFDSVS
Sbjct: 61  ETSSNHGK-SEHSK-TFHLTQMQWHHSQRDSNGCCKEDAWFDSVS 103


Top