BLASTX nr result

ID: Dioscorea21_contig00024131 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024131
         (535 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523570.1| conserved hypothetical protein [Ricinus comm...   208   5e-52
ref|XP_004141920.1| PREDICTED: ATP-dependent RNA helicase eIF4A-...   199   2e-49
ref|XP_004141918.1| PREDICTED: ATP-dependent RNA helicase eIF4A-...   199   2e-49
ref|XP_004141917.1| PREDICTED: ATP-dependent RNA helicase eIF4A-...   199   2e-49
ref|XP_002866971.1| hypothetical protein ARALYDRAFT_912642 [Arab...   191   6e-47

>ref|XP_002523570.1| conserved hypothetical protein [Ricinus communis]
           gi|223537132|gb|EEF38765.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 207

 Score =  208 bits (529), Expect = 5e-52
 Identities = 108/161 (67%), Positives = 125/161 (77%)
 Frame = -1

Query: 484 RHYYVAVDRLRFKMDTFVDLLGVAGRRPFLPIVVCCSSRDELDAVCXXXXXXXXXXXSPL 305
           RH+YVAVDRL FKM+T V+LLGVAGRR  LP+VVCCSSRDELDAVC           + L
Sbjct: 20  RHFYVAVDRLHFKMETLVELLGVAGRRSGLPMVVCCSSRDELDAVCSVVSNLPYISFASL 79

Query: 304 YSDQAESERTSILEKFRQSTLEWSQHFGAGSGNVLDIGDVAQKSSMIVVTDACLPVTTSG 125
           YSD AE+ERTS+LEKFRQ T+ W+Q+  A SGN  +I +   KS MIVVTD CLP+  SG
Sbjct: 80  YSDLAEAERTSVLEKFRQVTMRWNQNITAQSGNKDEI-EKEDKSHMIVVTDTCLPLLASG 138

Query: 124 EPLISARILINYELPSRKETYLRRMSTCLAPDGIVINMVVG 2
           E  ISAR+LINYELP++KETY RRMS+CLA DGIVINMVVG
Sbjct: 139 ESPISARVLINYELPTKKETYARRMSSCLAADGIVINMVVG 179


>ref|XP_004141920.1| PREDICTED: ATP-dependent RNA helicase eIF4A-like isoform 4 [Cucumis
           sativus] gi|449530831|ref|XP_004172395.1| PREDICTED:
           ATP-dependent RNA helicase eIF4A-like isoform 3 [Cucumis
           sativus]
          Length = 208

 Score =  199 bits (507), Expect = 2e-49
 Identities = 100/161 (62%), Positives = 122/161 (75%)
 Frame = -1

Query: 484 RHYYVAVDRLRFKMDTFVDLLGVAGRRPFLPIVVCCSSRDELDAVCXXXXXXXXXXXSPL 305
           RH+YVAVDRL+FKM+T V LL VAGRRP LP+VVCCSSRDELD+VC           + L
Sbjct: 23  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMVVCCSSRDELDSVCSAVSNLHYISLASL 82

Query: 304 YSDQAESERTSILEKFRQSTLEWSQHFGAGSGNVLDIGDVAQKSSMIVVTDACLPVTTSG 125
           YSD AE++R+ ILEKFRQ+T  WSQ F + S    +   V +KS MIVVTDACLP+  SG
Sbjct: 83  YSDLAEADRSLILEKFRQTTSRWSQKFSSLSEEKCEAEKVGEKSHMIVVTDACLPLLASG 142

Query: 124 EPLISARILINYELPSRKETYLRRMSTCLAPDGIVINMVVG 2
           E  +SA +LINYE+P++KETY+RRM+TC A DGI+INMVVG
Sbjct: 143 ESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVG 183


>ref|XP_004141918.1| PREDICTED: ATP-dependent RNA helicase eIF4A-like isoform 2 [Cucumis
           sativus] gi|449448330|ref|XP_004141919.1| PREDICTED:
           ATP-dependent RNA helicase eIF4A-like isoform 3 [Cucumis
           sativus] gi|449530829|ref|XP_004172394.1| PREDICTED:
           ATP-dependent RNA helicase eIF4A-like isoform 2 [Cucumis
           sativus]
          Length = 211

 Score =  199 bits (507), Expect = 2e-49
 Identities = 100/161 (62%), Positives = 122/161 (75%)
 Frame = -1

Query: 484 RHYYVAVDRLRFKMDTFVDLLGVAGRRPFLPIVVCCSSRDELDAVCXXXXXXXXXXXSPL 305
           RH+YVAVDRL+FKM+T V LL VAGRRP LP+VVCCSSRDELD+VC           + L
Sbjct: 23  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMVVCCSSRDELDSVCSAVSNLHYISLASL 82

Query: 304 YSDQAESERTSILEKFRQSTLEWSQHFGAGSGNVLDIGDVAQKSSMIVVTDACLPVTTSG 125
           YSD AE++R+ ILEKFRQ+T  WSQ F + S    +   V +KS MIVVTDACLP+  SG
Sbjct: 83  YSDLAEADRSLILEKFRQTTSRWSQKFSSLSEEKCEAEKVGEKSHMIVVTDACLPLLASG 142

Query: 124 EPLISARILINYELPSRKETYLRRMSTCLAPDGIVINMVVG 2
           E  +SA +LINYE+P++KETY+RRM+TC A DGI+INMVVG
Sbjct: 143 ESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVG 183


>ref|XP_004141917.1| PREDICTED: ATP-dependent RNA helicase eIF4A-like isoform 1 [Cucumis
           sativus] gi|449530827|ref|XP_004172393.1| PREDICTED:
           ATP-dependent RNA helicase eIF4A-like isoform 1 [Cucumis
           sativus]
          Length = 233

 Score =  199 bits (507), Expect = 2e-49
 Identities = 100/161 (62%), Positives = 122/161 (75%)
 Frame = -1

Query: 484 RHYYVAVDRLRFKMDTFVDLLGVAGRRPFLPIVVCCSSRDELDAVCXXXXXXXXXXXSPL 305
           RH+YVAVDRL+FKM+T V LL VAGRRP LP+VVCCSSRDELD+VC           + L
Sbjct: 23  RHFYVAVDRLQFKMETLVGLLDVAGRRPSLPMVVCCSSRDELDSVCSAVSNLHYISLASL 82

Query: 304 YSDQAESERTSILEKFRQSTLEWSQHFGAGSGNVLDIGDVAQKSSMIVVTDACLPVTTSG 125
           YSD AE++R+ ILEKFRQ+T  WSQ F + S    +   V +KS MIVVTDACLP+  SG
Sbjct: 83  YSDLAEADRSLILEKFRQTTSRWSQKFSSLSEEKCEAEKVGEKSHMIVVTDACLPLLASG 142

Query: 124 EPLISARILINYELPSRKETYLRRMSTCLAPDGIVINMVVG 2
           E  +SA +LINYE+P++KETY+RRM+TC A DGI+INMVVG
Sbjct: 143 ESPLSAHVLINYEIPTKKETYMRRMTTCSASDGILINMVVG 183


>ref|XP_002866971.1| hypothetical protein ARALYDRAFT_912642 [Arabidopsis lyrata subsp.
           lyrata] gi|297312807|gb|EFH43230.1| hypothetical protein
           ARALYDRAFT_912642 [Arabidopsis lyrata subsp. lyrata]
          Length = 212

 Score =  191 bits (485), Expect = 6e-47
 Identities = 94/163 (57%), Positives = 122/163 (74%), Gaps = 3/163 (1%)
 Frame = -1

Query: 481 HYYVAVDRLRFKMDTFVDLLGVAGRRPFLPIVVCCSSRDELDAVCXXXXXXXXXXXSPLY 302
           H+Y+AVDR +FKM+T V+LLGV GRRP+LPIVVCCSSRDELDAVC           + LY
Sbjct: 22  HFYLAVDRPQFKMETVVELLGVLGRRPWLPIVVCCSSRDELDAVCSSLSTLPYISLAALY 81

Query: 301 SDQAESERTSILEKFRQSTLEWSQHFGAGSGNVLDIGDVAQ---KSSMIVVTDACLPVTT 131
           SD A+ ERT ++EKFRQ+T+ W+Q   +    VL+  +  +   KS ++VVTD CLP+ +
Sbjct: 82  SDLADRERTMVIEKFRQATINWNQQLNSVVEEVLEESETRKEENKSHLVVVTDVCLPLLS 141

Query: 130 SGEPLISARILINYELPSRKETYLRRMSTCLAPDGIVINMVVG 2
           SGE  +SAR+LINYELP++KETY RR++TCLA  GI+INMVVG
Sbjct: 142 SGESSLSARVLINYELPTKKETYTRRITTCLASGGIIINMVVG 184


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