BLASTX nr result
ID: Dioscorea21_contig00024127
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00024127
(1133 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containi... 547 e-153
dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare] 536 e-150
ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containi... 533 e-149
emb|CBI36131.3| unnamed protein product [Vitis vinifera] 522 e-146
ref|XP_002468177.1| hypothetical protein SORBIDRAFT_01g041070 [S... 514 e-143
>ref|XP_002284545.2| PREDICTED: pentatricopeptide repeat-containing protein At2g27610-like
[Vitis vinifera]
Length = 648
Score = 547 bits (1409), Expect = e-153
Identities = 259/343 (75%), Positives = 294/343 (85%)
Frame = -1
Query: 1130 FEAQDKVKTALIDMYAKSGWLKIARTLFEQLAERRLVSWNAMIAGYAMHGHAIEAFALFD 951
FE+ DKVKTAL+DMYAK G +++AR LFE+L +R+VSWNAMI GYAMHGHA EA LF+
Sbjct: 308 FESHDKVKTALVDMYAKCGSVRVARNLFERLGVKRVVSWNAMITGYAMHGHATEALDLFE 367
Query: 950 RMKQEAVVVPDHITFVGVLSACSHGGLMEQGWKFFNSMQGDYSLKPLPQHYTCMIDLLGH 771
M + V PDHITFVGVLSACSHGGL+E+GW FF +M DY + P QHYTCM+DLLGH
Sbjct: 368 EMNR--VAKPDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVDLLGH 425
Query: 770 SGRLDEAYKLIGEMTMTPDSGVWGSLLNACKIHRNVELGEVALEKLIELEPDNAGNYVIL 591
SGRLDEAY LI +M + PDSGVWG+LLN+CKIH NVELGE+ALE+LIELEPD+AGNYVIL
Sbjct: 426 SGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHANVELGEIALERLIELEPDDAGNYVIL 485
Query: 590 SNIYAQVGKWEGTAKVRKMMTERGLKKSIACSWIEVKNKVHAFVVGDLSHPRSEEVYDEL 411
SNIYAQ GKWEG AK+RK+MT+R LKKSIACSWIEVKNKVHAF+ GD SHP S+E+Y EL
Sbjct: 486 SNIYAQAGKWEGVAKLRKLMTDRRLKKSIACSWIEVKNKVHAFLSGDTSHPLSDEIYSEL 545
Query: 410 ERLEGLMKEAGYEAETMPVFHDVEDDEKRNMVRSHSERLAIAFGLINTPPGSRLLVTKNL 231
ER+ GLMKEAGY T VFHDVEDDEK NMV SHSERLAIAFGLI+TPPG+RLL+TKNL
Sbjct: 546 ERVGGLMKEAGYSPSTGSVFHDVEDDEKANMVCSHSERLAIAFGLISTPPGTRLLITKNL 605
Query: 230 RVCEDCHVVIKLISKIVGREIVVRDVNRYHHFKNGLCSCGDYW 102
R+CEDCHV IK ISKI REI VRDVNRYHHFK+G+CSCGDYW
Sbjct: 606 RICEDCHVAIKFISKITEREITVRDVNRYHHFKDGVCSCGDYW 648
Score = 57.0 bits (136), Expect = 9e-06
Identities = 40/154 (25%), Positives = 70/154 (45%)
Frame = -1
Query: 1133 GFEAQDKVKTALIDMYAKSGWLKIARTLFEQLAERRLVSWNAMIAGYAMHGHAIEAFALF 954
G+E V ALIDMYAK G + AR +F+++ R V WN+M+A Y+ +GH +L
Sbjct: 206 GWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLWNSMLAAYSQNGHPDACLSLC 265
Query: 953 DRMKQEAVVVPDHITFVGVLSACSHGGLMEQGWKFFNSMQGDYSLKPLPQHYTCMIDLLG 774
M + P T V +SA + + QG + + + + + T ++D+
Sbjct: 266 SEMVLTG-LRPTEATLVTAISASADNAALPQG-RELHGLSWRQEFESHDKVKTALVDMYA 323
Query: 773 HSGRLDEAYKLIGEMTMTPDSGVWGSLLNACKIH 672
G + A L + + W +++ +H
Sbjct: 324 KCGSVRVARNLFERLGVKRVVS-WNAMITGYAMH 356
>dbj|BAJ89940.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 637
Score = 536 bits (1382), Expect = e-150
Identities = 250/344 (72%), Positives = 298/344 (86%)
Frame = -1
Query: 1133 GFEAQDKVKTALIDMYAKSGWLKIARTLFEQLAERRLVSWNAMIAGYAMHGHAIEAFALF 954
GF QDK+KT+L+DMYAKSGW+++AR LFEQL +R LVSWNAMI GY MHGHA EA ALF
Sbjct: 294 GFGLQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHADEALALF 353
Query: 953 DRMKQEAVVVPDHITFVGVLSACSHGGLMEQGWKFFNSMQGDYSLKPLPQHYTCMIDLLG 774
++MK +A V PD+ITFVGVLSAC+HGG++E+ +FF M YS+KP QHYTC+ID+LG
Sbjct: 354 NKMKGDAQVTPDNITFVGVLSACNHGGMVEEAKEFFYLMVNAYSIKPTVQHYTCVIDVLG 413
Query: 773 HSGRLDEAYKLIGEMTMTPDSGVWGSLLNACKIHRNVELGEVALEKLIELEPDNAGNYVI 594
H+GR +EAY LI M++ PDSG+WG+LLN CKIH+NVELGE+AL+KLIELEP++AGNYV
Sbjct: 414 HTGRFEEAYDLIKGMSIEPDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVH 473
Query: 593 LSNIYAQVGKWEGTAKVRKMMTERGLKKSIACSWIEVKNKVHAFVVGDLSHPRSEEVYDE 414
LSNIYAQ GKWE A+VRK+MT RGLKK +ACSWIE+K K H F+VGD SHPRS+E+Y E
Sbjct: 474 LSNIYAQSGKWEKAARVRKLMTNRGLKKILACSWIELKGKTHGFLVGDASHPRSDEIYGE 533
Query: 413 LERLEGLMKEAGYEAETMPVFHDVEDDEKRNMVRSHSERLAIAFGLINTPPGSRLLVTKN 234
LERLEGLM +AGY + +PVFH+V+DDEKRNMVRSHSERLAIAFGLI+TPPG++LLVTKN
Sbjct: 534 LERLEGLMSDAGYVPDIIPVFHNVDDDEKRNMVRSHSERLAIAFGLISTPPGTKLLVTKN 593
Query: 233 LRVCEDCHVVIKLISKIVGREIVVRDVNRYHHFKNGLCSCGDYW 102
LRVCEDCHVVIKLIS+IV REI++RDVNRYHHF NG CSC DYW
Sbjct: 594 LRVCEDCHVVIKLISQIVQREIIIRDVNRYHHFVNGECSCKDYW 637
Score = 60.1 bits (144), Expect = 1e-06
Identities = 47/179 (26%), Positives = 84/179 (46%), Gaps = 4/179 (2%)
Frame = -1
Query: 1112 VKTALIDMYAKSGWLKIARTLFEQLAERRLVSWNAMIAGYAMHGHAIEAFALFDRMKQEA 933
V ++DMYAK G + AR +F+ +A R V WN+MIA Y +G +EA AL M
Sbjct: 200 VCAGVVDMYAKCGCVDDARAVFDGIAVRDAVVWNSMIAAYGQNGRPMEALALCRDMAANG 259
Query: 932 VVVPDHITFVGVLSACSHGGLMEQGWKFFN-SMQGDYSLKPLPQHYTCMIDLLGHSGRLD 756
+ P T V +SA + + +G + + + L+ + T ++D+ SG +
Sbjct: 260 -IGPTIATLVSAVSAAADAAALPRGRELHGFGWRRGFGLQ--DKLKTSLVDMYAKSGWVQ 316
Query: 755 EAYKLIGEMTMTPDSGVWGSLLNACKIHRNVELGEVALEKL---IELEPDNAGNYVILS 588
A +++ E M + W +++ +H + + K+ ++ PDN +LS
Sbjct: 317 VA-RVLFEQLMKRELVSWNAMICGYGMHGHADEALALFNKMKGDAQVTPDNITFVGVLS 374
>ref|XP_003563798.1| PREDICTED: pentatricopeptide repeat-containing protein At1g11290-like
[Brachypodium distachyon]
Length = 637
Score = 533 bits (1372), Expect = e-149
Identities = 247/344 (71%), Positives = 295/344 (85%)
Frame = -1
Query: 1133 GFEAQDKVKTALIDMYAKSGWLKIARTLFEQLAERRLVSWNAMIAGYAMHGHAIEAFALF 954
GF+ QDK+KT+L+DMYAKSGW+++AR LFEQL +R LVSWNAMI GY MHGH EA LF
Sbjct: 294 GFDRQDKLKTSLVDMYAKSGWVQVARVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLF 353
Query: 953 DRMKQEAVVVPDHITFVGVLSACSHGGLMEQGWKFFNSMQGDYSLKPLPQHYTCMIDLLG 774
++M+ EA V PD+ITFVGVLSAC+HGG++++ +FF M YS+KP QH+TC++D+LG
Sbjct: 354 NKMRVEAQVTPDNITFVGVLSACNHGGMVKEAKEFFGLMVDVYSIKPTVQHFTCLVDVLG 413
Query: 773 HSGRLDEAYKLIGEMTMTPDSGVWGSLLNACKIHRNVELGEVALEKLIELEPDNAGNYVI 594
H+GR +EAY LI M M PDSG+WG+LLN CKIH+NVELGE+AL+KLIELEP++AGNYV+
Sbjct: 414 HAGRFEEAYDLIKGMPMQPDSGIWGALLNGCKIHKNVELGELALQKLIELEPEDAGNYVL 473
Query: 593 LSNIYAQVGKWEGTAKVRKMMTERGLKKSIACSWIEVKNKVHAFVVGDLSHPRSEEVYDE 414
LSNIYAQ GKWE A+VRK+MT RGLKK I CSWIE+K K H F+VGD SHPRS E+Y+E
Sbjct: 474 LSNIYAQSGKWEKAARVRKLMTNRGLKKIIGCSWIELKGKTHGFLVGDASHPRSAEIYEE 533
Query: 413 LERLEGLMKEAGYEAETMPVFHDVEDDEKRNMVRSHSERLAIAFGLINTPPGSRLLVTKN 234
LERLEGLM +AGY +TMPVFHDV DDEKRNM+RSHSERLAIAFGLI+TP G++LLVTKN
Sbjct: 534 LERLEGLMSDAGYMPDTMPVFHDVGDDEKRNMMRSHSERLAIAFGLISTPSGTKLLVTKN 593
Query: 233 LRVCEDCHVVIKLISKIVGREIVVRDVNRYHHFKNGLCSCGDYW 102
LRVCEDCHVVIKLIS+IV REI++RDVNRYHHF NG CSC DYW
Sbjct: 594 LRVCEDCHVVIKLISQIVQREIIIRDVNRYHHFVNGECSCKDYW 637
Score = 58.9 bits (141), Expect = 2e-06
Identities = 52/178 (29%), Positives = 76/178 (42%), Gaps = 34/178 (19%)
Frame = -1
Query: 1112 VKTALIDMYAKSGWLKIARTLFEQLAERRLVSWNAMIAGYAMHGHAIEAFALFDRMKQEA 933
V L+DMYAK G + AR +F+++ R V WN+MIA Y +G +EA +L M
Sbjct: 200 VCAGLVDMYAKCGCVDDARAVFDRIRVRDSVVWNSMIAAYGQNGRPMEALSLCRDMAANG 259
Query: 932 VVVPDHITFVGVLSACSHGGLMEQ-------GW--------KFFNSMQGDYS-------- 822
V P T V +SA + + + GW K S+ Y+
Sbjct: 260 -VGPTIATLVSTISAAADAAALPRGRELHGFGWRRGFDRQDKLKTSLVDMYAKSGWVQVA 318
Query: 821 -------LKPLPQHYTCMIDLLGHSGRLDEAYKLIGEM----TMTPDSGVWGSLLNAC 681
+K + MI G G DEA KL +M +TPD+ + +L+AC
Sbjct: 319 RVLFEQLMKRELVSWNAMICGYGMHGHFDEALKLFNKMRVEAQVTPDNITFVGVLSAC 376
>emb|CBI36131.3| unnamed protein product [Vitis vinifera]
Length = 550
Score = 522 bits (1344), Expect = e-146
Identities = 253/347 (72%), Positives = 287/347 (82%), Gaps = 3/347 (0%)
Frame = -1
Query: 1133 GFEAQDKVKTALIDMYAKSGWLKIARTLFEQLAERR---LVSWNAMIAGYAMHGHAIEAF 963
G+E V ALIDMYAK G + AR +F+++ R +VSWNAMI GYAMHGHA EA
Sbjct: 206 GWEKDVFVGAALIDMYAKCGCVGSAREVFDKILVRDAVLVVSWNAMITGYAMHGHATEAL 265
Query: 962 ALFDRMKQEAVVVPDHITFVGVLSACSHGGLMEQGWKFFNSMQGDYSLKPLPQHYTCMID 783
LF+ M + V PDHITFVGVLSACSHGGL+E+GW FF +M DY + P QHYTCM+D
Sbjct: 266 DLFEEMNR--VAKPDHITFVGVLSACSHGGLLEEGWMFFETMIRDYKIDPTVQHYTCMVD 323
Query: 782 LLGHSGRLDEAYKLIGEMTMTPDSGVWGSLLNACKIHRNVELGEVALEKLIELEPDNAGN 603
LLGHSGRLDEAY LI +M + PDSGVWG+LLN+CKIH NVELGE+ALE+LIELEPD+AGN
Sbjct: 324 LLGHSGRLDEAYNLIMQMKVLPDSGVWGALLNSCKIHANVELGEIALERLIELEPDDAGN 383
Query: 602 YVILSNIYAQVGKWEGTAKVRKMMTERGLKKSIACSWIEVKNKVHAFVVGDLSHPRSEEV 423
YVILSNIYAQ GKWEG AK+RK+MT+R LKKSIACSWIEVKNKVHAF+ GD SHP S+E+
Sbjct: 384 YVILSNIYAQAGKWEGVAKLRKLMTDRRLKKSIACSWIEVKNKVHAFLSGDTSHPLSDEI 443
Query: 422 YDELERLEGLMKEAGYEAETMPVFHDVEDDEKRNMVRSHSERLAIAFGLINTPPGSRLLV 243
Y ELER+ GLMKEAGY T VFHDVEDDEK NMV SHSERLAIAFGLI+TPPG+RLL+
Sbjct: 444 YSELERVGGLMKEAGYSPSTGSVFHDVEDDEKANMVCSHSERLAIAFGLISTPPGTRLLI 503
Query: 242 TKNLRVCEDCHVVIKLISKIVGREIVVRDVNRYHHFKNGLCSCGDYW 102
TKNLR+CEDCHV IK ISKI REI VRDVNRYHHFK+G+CSCGDYW
Sbjct: 504 TKNLRICEDCHVAIKFISKITEREITVRDVNRYHHFKDGVCSCGDYW 550
>ref|XP_002468177.1| hypothetical protein SORBIDRAFT_01g041070 [Sorghum bicolor]
gi|241922031|gb|EER95175.1| hypothetical protein
SORBIDRAFT_01g041070 [Sorghum bicolor]
Length = 640
Score = 514 bits (1324), Expect = e-143
Identities = 239/344 (69%), Positives = 289/344 (84%)
Frame = -1
Query: 1133 GFEAQDKVKTALIDMYAKSGWLKIARTLFEQLAERRLVSWNAMIAGYAMHGHAIEAFALF 954
GF +QDK+KT+L+DMYAKSGW+ +AR LF+QL R L+SWNAMI G+ MHGHA A LF
Sbjct: 297 GFGSQDKLKTSLLDMYAKSGWVTVARVLFDQLFHRELISWNAMICGFGMHGHADHACELF 356
Query: 953 DRMKQEAVVVPDHITFVGVLSACSHGGLMEQGWKFFNSMQGDYSLKPLPQHYTCMIDLLG 774
RM+ EA V+PDHITFVGVLSAC+HGG++++ + F+ M YS+KP+ QHYTC++D+LG
Sbjct: 357 RRMRNEAQVMPDHITFVGVLSACNHGGMVQEAKEVFDLMVTVYSIKPMVQHYTCLVDVLG 416
Query: 773 HSGRLDEAYKLIGEMTMTPDSGVWGSLLNACKIHRNVELGEVALEKLIELEPDNAGNYVI 594
HSGR EA +I M + PDSG+WG+LLN CKIH+NVEL E+AL KLIELEP++AGNYV+
Sbjct: 417 HSGRFKEASDVIKGMLVKPDSGIWGALLNGCKIHKNVELAELALHKLIELEPEDAGNYVL 476
Query: 593 LSNIYAQVGKWEGTAKVRKMMTERGLKKSIACSWIEVKNKVHAFVVGDLSHPRSEEVYDE 414
LSNIYAQ GKWE A+VRK+MT RGLKK IACSWIE+K K H F+VGD SHPRS+E+Y+E
Sbjct: 477 LSNIYAQSGKWEEAARVRKLMTNRGLKKIIACSWIELKGKSHGFLVGDASHPRSDEIYEE 536
Query: 413 LERLEGLMKEAGYEAETMPVFHDVEDDEKRNMVRSHSERLAIAFGLINTPPGSRLLVTKN 234
LERLEGL+ + GY +T VFH+VEDDEKRNMVR HSERLAIAFGLI+TPPG++LLVTKN
Sbjct: 537 LERLEGLISQTGYVPDTTSVFHNVEDDEKRNMVRGHSERLAIAFGLISTPPGTKLLVTKN 596
Query: 233 LRVCEDCHVVIKLISKIVGREIVVRDVNRYHHFKNGLCSCGDYW 102
LRVCEDCHVVIKLIS+I REI++RDVNRYHHF NG CSC D+W
Sbjct: 597 LRVCEDCHVVIKLISQIEQREIIIRDVNRYHHFVNGECSCKDHW 640
Score = 62.0 bits (149), Expect = 3e-07
Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 14/156 (8%)
Frame = -1
Query: 1106 TALIDMYAKSGWLKIARTLFEQLAER-RLVSWNAMIAGYAMHGHAIEAFALFDRMKQEAV 930
T L+D+YA G + +AR LF+++ + + WN +I YA G A L+ M
Sbjct: 102 TRLVDLYASCGLVSVARRLFDEMPNQGNVFLWNVLIRAYARDGPREAAIELYREMLACGS 161
Query: 929 VVPDHITFVGVLSACS-----------HGGLMEQGWKFFNSMQGDYSLKPLPQHYTC--M 789
+ PD+ T+ VL AC+ H +M W + C +
Sbjct: 162 MEPDNFTYPPVLKACAALLDLGAGREVHDRVMRTSW--------------AADVFVCAGL 207
Query: 788 IDLLGHSGRLDEAYKLIGEMTMTPDSGVWGSLLNAC 681
ID+ G +DEA+ + + T D+ VW S++ AC
Sbjct: 208 IDMYAKCGCVDEAWAVF-DSTTVRDAVVWNSMIAAC 242
Score = 57.0 bits (136), Expect = 9e-06
Identities = 47/161 (29%), Positives = 72/161 (44%), Gaps = 11/161 (6%)
Frame = -1
Query: 1112 VKTALIDMYAKSGWLKIARTLFEQLAERRLVSWNAMIAGYAMHGHAIEAFALFDRMKQEA 933
V LIDMYAK G + A +F+ R V WN+MIA +G EA AL M E
Sbjct: 203 VCAGLIDMYAKCGCVDEAWAVFDSTTVRDAVVWNSMIAACGQNGRPAEALALCRNMAAEG 262
Query: 932 VVVPDHITFVGVLSACSHGGLMEQGWKF--FNSMQGDYSLKPLPQHYTCMIDLLGHSGRL 759
+ P +T V +SA + G + +G + + +G S L T ++D+ SG +
Sbjct: 263 -IAPTIVTLVSAISAAADAGALPRGRELHGYGWRRGFGSQDKLK---TSLLDMYAKSGWV 318
Query: 758 DEAYKLIGEM---------TMTPDSGVWGSLLNACKIHRNV 663
A L ++ M G+ G +AC++ R +
Sbjct: 319 TVARVLFDQLFHRELISWNAMICGFGMHGHADHACELFRRM 359