BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024112
         (309 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ94465.1| predicted protein [Hordeum vulgare subsp. vulgar...    72   4e-11
gb|AAM63715.1| unknown [Arabidopsis thaliana]                          67   1e-09
ref|XP_003569713.1| PREDICTED: E3 ubiquitin-protein ligase HERC2...    66   3e-09
ref|XP_002456275.1| hypothetical protein SORBIDRAFT_03g033330 [S...    66   3e-09
ref|XP_002283782.2| PREDICTED: E3 ubiquitin-protein ligase HERC2...    65   6e-09

>dbj|BAJ94465.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326532960|dbj|BAJ89325.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 566

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
 Frame = +3

Query: 54  RVKQIAGREAHTLALSEDGNV---GRGTFTRLGTGKEHDEHSPVRVYFPETSSLKKSTDP 224
           +V  +A  EAHTLAL+ DG V   GRGTF RLGTG+E D H P  V             P
Sbjct: 4   KVSAVAAGEAHTLALTGDGEVYSWGRGTFGRLGTGREADVHVPTAVL------------P 51

Query: 225 SVPSGKSNSSRPLFVGIAVGAYHSLAL 305
           +V +  +   RP FV +A GAYHSLAL
Sbjct: 52  AVAAAAAGRPRPRFVAVAAGAYHSLAL 78


>gb|AAM63715.1| unknown [Arabidopsis thaliana]
          Length = 553

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 40/88 (45%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
 Frame = +3

Query: 51  RRVKQIAGREAHTLALSEDGNV---GRGTFTRLGTGKEHDEHSPVRVYFPETSSLKKSTD 221
           R++  +A  EAHT+AL+ DG V   GRG F RLGTGKE DE  PVRV FP          
Sbjct: 16  RKIISLAAGEAHTIALTGDGCVYSWGRGMFGRLGTGKESDELVPVRVEFP---------- 65

Query: 222 PSVPSGKSNSSRPLFVGIAVGAYHSLAL 305
                 ++   R   +G+A GAYHSLA+
Sbjct: 66  -----NQAEGERIRIIGVAAGAYHSLAV 88


>ref|XP_003569713.1| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Brachypodium
           distachyon]
          Length = 564

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 42/87 (48%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
 Frame = +3

Query: 54  RVKQIAGREAHTLALSEDGNV---GRGTFTRLGTGKEHDEHSPVRVYFPETSSLKKSTDP 224
           +V  +A  EAHTLAL+ +G V   GRGTF RLGTG E DEH P  V             P
Sbjct: 4   KVSAVAAGEAHTLALTCNGEVYSWGRGTFGRLGTGSEGDEHVPTAV------------AP 51

Query: 225 SVPSGKSNSSRPLFVGIAVGAYHSLAL 305
           +V  G     RP F  +A GAYHSLAL
Sbjct: 52  AVAVG--GRPRPKFAAVAAGAYHSLAL 76


>ref|XP_002456275.1| hypothetical protein SORBIDRAFT_03g033330 [Sorghum bicolor]
           gi|241928250|gb|EES01395.1| hypothetical protein
           SORBIDRAFT_03g033330 [Sorghum bicolor]
          Length = 560

 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 42/87 (48%), Positives = 50/87 (57%), Gaps = 3/87 (3%)
 Frame = +3

Query: 54  RVKQIAGREAHTLALSEDGNV---GRGTFTRLGTGKEHDEHSPVRVYFPETSSLKKSTDP 224
           +V  +A  EAHTLAL+ DG V   GRG F RLGTG+E DE  P  V             P
Sbjct: 4   KVVAVAAGEAHTLALTGDGQVYSWGRGPFGRLGTGREDDELVPTAV------------AP 51

Query: 225 SVPSGKSNSSRPLFVGIAVGAYHSLAL 305
           +V +G   + RP FV +A GAYHSLAL
Sbjct: 52  AVSAG--GTPRPRFVAVAAGAYHSLAL 76


>ref|XP_002283782.2| PREDICTED: E3 ubiquitin-protein ligase HERC2-like [Vitis vinifera]
          Length = 564

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 40/87 (45%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
 Frame = +3

Query: 54  RVKQIAGREAHTLALSEDGNV---GRGTFTRLGTGKEHDEHSPVRVYFPETSSLKKSTDP 224
           ++  +A  EAH+L L+ DG V   GRGTF RLGTG E DE  PV + F            
Sbjct: 16  KIVSVAAGEAHSLVLTGDGRVYSWGRGTFGRLGTGSEADELFPVPIKFDSAE-------- 67

Query: 225 SVPSGKSNSSRPLFVGIAVGAYHSLAL 305
                KS+S    FVGIA GAYHS+AL
Sbjct: 68  -----KSDSKGVKFVGIAAGAYHSVAL 89