BLASTX nr result

ID: Dioscorea21_contig00024087 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024087
         (305 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFB73912.1| polyprotein [Citrus sinensis]                          157   8e-37
gb|AFB73911.1| polyprotein [Citrus sinensis]                          155   2e-36
dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]                             149   2e-34
gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]              138   5e-31
gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]              138   5e-31

>gb|AFB73912.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score =  157 bits (397), Expect = 8e-37
 Identities = 78/99 (78%), Positives = 91/99 (91%)
 Frame = -3

Query: 303 MAESTSMTEHMNTLNTLFSQLTSLGHTIESGERAEILLQSLPDSYDQLVINLTNNVPMDS 124
           MAEST +T+H+NTL TLFSQLT+LGH IE  ERAE+LLQSLPDSYDQL+INLTNN P+DS
Sbjct: 107 MAESTMVTDHINTLKTLFSQLTTLGHNIEENERAELLLQSLPDSYDQLIINLTNNNPVDS 166

Query: 123 LVFDNIAAAVLEEESRRKNKEDKLASSQQAEALTVTRGR 7
           LVFD++AA+VL EESRRKNKE++ ASSQQAEAL+VTRGR
Sbjct: 167 LVFDDVAASVLNEESRRKNKENRQASSQQAEALSVTRGR 205


>gb|AFB73911.1| polyprotein [Citrus sinensis]
          Length = 1309

 Score =  155 bits (393), Expect = 2e-36
 Identities = 77/99 (77%), Positives = 91/99 (91%)
 Frame = -3

Query: 303 MAESTSMTEHMNTLNTLFSQLTSLGHTIESGERAEILLQSLPDSYDQLVINLTNNVPMDS 124
           MAEST +T+H+NTL TLFSQLT+LGH IE  ERAE+LLQSLPDSYDQL+INLTNN P++S
Sbjct: 107 MAESTMVTDHINTLKTLFSQLTTLGHNIEENERAELLLQSLPDSYDQLIINLTNNNPVES 166

Query: 123 LVFDNIAAAVLEEESRRKNKEDKLASSQQAEALTVTRGR 7
           LVFD++AA+VL EESRRKNKE++ ASSQQAEAL+VTRGR
Sbjct: 167 LVFDDVAASVLNEESRRKNKENRQASSQQAEALSVTRGR 205


>dbj|BAD34493.1| Gag-Pol [Ipomoea batatas]
          Length = 1298

 Score =  149 bits (377), Expect = 2e-34
 Identities = 77/99 (77%), Positives = 87/99 (87%)
 Frame = -3

Query: 303 MAESTSMTEHMNTLNTLFSQLTSLGHTIESGERAEILLQSLPDSYDQLVINLTNNVPMDS 124
           M+ESTS+TEH+NTLNTLFSQLTSL   IE  ERAE+LLQSLPDSYDQL+INLTNN+  D 
Sbjct: 108 MSESTSVTEHLNTLNTLFSQLTSLSCKIEPQERAELLLQSLPDSYDQLIINLTNNILTDY 167

Query: 123 LVFDNIAAAVLEEESRRKNKEDKLASSQQAEALTVTRGR 7
           LVFD++AAAVLEEESRRKNKED+  + QQAEALTV RGR
Sbjct: 168 LVFDDVAAAVLEEESRRKNKEDRQVNLQQAEALTVMRGR 206


>gb|ACL97386.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  138 bits (347), Expect = 5e-31
 Identities = 69/99 (69%), Positives = 84/99 (84%)
 Frame = -3

Query: 303 MAESTSMTEHMNTLNTLFSQLTSLGHTIESGERAEILLQSLPDSYDQLVINLTNNVPMDS 124
           M ESTS+T+H+NTLNTLFSQLT+    I   ERAE+LLQSLPDSYDQL+IN+TNN   D+
Sbjct: 107 MGESTSVTDHINTLNTLFSQLTASDFKIAKNERAELLLQSLPDSYDQLIINITNNNIADT 166

Query: 123 LVFDNIAAAVLEEESRRKNKEDKLASSQQAEALTVTRGR 7
           L FD++A A+LEEESRRKNKE++  SS+QAEALT+TRGR
Sbjct: 167 LHFDDVAGAILEEESRRKNKEERSESSKQAEALTMTRGR 205


>gb|ACL97385.1| Gag-Pol polyprotein [Medicago truncatula]
          Length = 1305

 Score =  138 bits (347), Expect = 5e-31
 Identities = 69/99 (69%), Positives = 84/99 (84%)
 Frame = -3

Query: 303 MAESTSMTEHMNTLNTLFSQLTSLGHTIESGERAEILLQSLPDSYDQLVINLTNNVPMDS 124
           M ESTS+T+H+NTLNTLFSQLT+    I   ERAE+LLQSLPDSYDQL+IN+TNN   D+
Sbjct: 107 MGESTSVTDHINTLNTLFSQLTASDFKIAENERAELLLQSLPDSYDQLIINITNNNIADT 166

Query: 123 LVFDNIAAAVLEEESRRKNKEDKLASSQQAEALTVTRGR 7
           L FD++A A+LEEESRRKNKE++  SS+QAEALT+TRGR
Sbjct: 167 LHFDDVAGAILEEESRRKNKEERSESSKQAEALTMTRGR 205


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