BLASTX nr result

ID: Dioscorea21_contig00024083 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024083
         (202 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001059610.2| Os07g0471900 [Oryza sativa Japonica Group] g...   107   8e-22
gb|EEE67143.1| hypothetical protein OsJ_24199 [Oryza sativa Japo...   107   8e-22
gb|EEC82003.1| hypothetical protein OsI_25950 [Oryza sativa Indi...   107   8e-22
dbj|BAC06965.1| bHLH transcription factor-like protein [Oryza sa...   107   8e-22
ref|XP_002460681.1| hypothetical protein SORBIDRAFT_02g033000 [S...   107   1e-21

>ref|NP_001059610.2| Os07g0471900 [Oryza sativa Japonica Group]
           gi|255677757|dbj|BAF21524.2| Os07g0471900 [Oryza sativa
           Japonica Group]
          Length = 436

 Score =  107 bits (268), Expect = 8e-22
 Identities = 52/68 (76%), Positives = 62/68 (91%), Gaps = 2/68 (2%)
 Frame = -3

Query: 200 PFGKTDTASVLMEAINYIRFLQEQVQLLSDPYMKLNASKEHNSWGGMERKEK--DKVDLR 27
           PFGKTDTASVL EAINYI++L EQVQLLSDPYMK ++SK++N+WGG++RKEK   +VDLR
Sbjct: 342 PFGKTDTASVLYEAINYIKWLHEQVQLLSDPYMKSSSSKDYNAWGGLDRKEKADAEVDLR 401

Query: 26  SRGLCLVP 3
           SRGLCLVP
Sbjct: 402 SRGLCLVP 409


>gb|EEE67143.1| hypothetical protein OsJ_24199 [Oryza sativa Japonica Group]
          Length = 457

 Score =  107 bits (268), Expect = 8e-22
 Identities = 52/68 (76%), Positives = 62/68 (91%), Gaps = 2/68 (2%)
 Frame = -3

Query: 200 PFGKTDTASVLMEAINYIRFLQEQVQLLSDPYMKLNASKEHNSWGGMERKEK--DKVDLR 27
           PFGKTDTASVL EAINYI++L EQVQLLSDPYMK ++SK++N+WGG++RKEK   +VDLR
Sbjct: 363 PFGKTDTASVLYEAINYIKWLHEQVQLLSDPYMKSSSSKDYNAWGGLDRKEKADAEVDLR 422

Query: 26  SRGLCLVP 3
           SRGLCLVP
Sbjct: 423 SRGLCLVP 430


>gb|EEC82003.1| hypothetical protein OsI_25950 [Oryza sativa Indica Group]
          Length = 562

 Score =  107 bits (268), Expect = 8e-22
 Identities = 52/68 (76%), Positives = 62/68 (91%), Gaps = 2/68 (2%)
 Frame = -3

Query: 200 PFGKTDTASVLMEAINYIRFLQEQVQLLSDPYMKLNASKEHNSWGGMERKEK--DKVDLR 27
           PFGKTDTASVL EAINYI++L EQVQLLSDPYMK ++SK++N+WGG++RKEK   +VDLR
Sbjct: 475 PFGKTDTASVLYEAINYIKWLHEQVQLLSDPYMKSSSSKDYNAWGGLDRKEKADAEVDLR 534

Query: 26  SRGLCLVP 3
           SRGLCLVP
Sbjct: 535 SRGLCLVP 542


>dbj|BAC06965.1| bHLH transcription factor-like protein [Oryza sativa Japonica
           Group] gi|50510046|dbj|BAD30671.1| bHLH transcription
           factor-like protein [Oryza sativa Japonica Group]
          Length = 434

 Score =  107 bits (268), Expect = 8e-22
 Identities = 52/68 (76%), Positives = 62/68 (91%), Gaps = 2/68 (2%)
 Frame = -3

Query: 200 PFGKTDTASVLMEAINYIRFLQEQVQLLSDPYMKLNASKEHNSWGGMERKEK--DKVDLR 27
           PFGKTDTASVL EAINYI++L EQVQLLSDPYMK ++SK++N+WGG++RKEK   +VDLR
Sbjct: 340 PFGKTDTASVLYEAINYIKWLHEQVQLLSDPYMKSSSSKDYNAWGGLDRKEKADAEVDLR 399

Query: 26  SRGLCLVP 3
           SRGLCLVP
Sbjct: 400 SRGLCLVP 407


>ref|XP_002460681.1| hypothetical protein SORBIDRAFT_02g033000 [Sorghum bicolor]
           gi|241924058|gb|EER97202.1| hypothetical protein
           SORBIDRAFT_02g033000 [Sorghum bicolor]
          Length = 368

 Score =  107 bits (267), Expect = 1e-21
 Identities = 51/68 (75%), Positives = 61/68 (89%), Gaps = 2/68 (2%)
 Frame = -3

Query: 200 PFGKTDTASVLMEAINYIRFLQEQVQLLSDPYMKLNASKEHNSWGGMERKEKD--KVDLR 27
           PFGKTDTASVL EAINYI++L EQVQLLSDPYMK ++SK++N+WGG +RKEK   ++DLR
Sbjct: 274 PFGKTDTASVLYEAINYIKWLHEQVQLLSDPYMKTSSSKDYNAWGGSDRKEKSETEIDLR 333

Query: 26  SRGLCLVP 3
           SRGLCLVP
Sbjct: 334 SRGLCLVP 341


Top