BLASTX nr result
ID: Dioscorea21_contig00024069
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00024069
(617 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CAN81324.1| hypothetical protein VITISV_041843 [Vitis vinifera] 198 9e-60
ref|XP_002280516.1| PREDICTED: pentatricopeptide repeat-containi... 196 3e-59
emb|CBI20759.3| unnamed protein product [Vitis vinifera] 196 3e-59
gb|ACN26818.1| unknown [Zea mays] gi|414589544|tpg|DAA40115.1| T... 189 2e-56
tpg|DAA40116.1| TPA: hypothetical protein ZEAMMB73_157272 [Zea m... 189 2e-56
>emb|CAN81324.1| hypothetical protein VITISV_041843 [Vitis vinifera]
Length = 1120
Score = 198 bits (503), Expect(2) = 9e-60
Identities = 96/145 (66%), Positives = 122/145 (84%), Gaps = 1/145 (0%)
Frame = +1
Query: 67 AKKRYGKLSTAVMNAVMEACVHCRDIESSIQVFEEMAKPESCGVDDISYGILLKGLGEAR 246
AK+R+GKL+T VMNAVMEACVHC D++ +++VF+EM KPESCGVD+++YG LLKGLGEAR
Sbjct: 78 AKRRHGKLNTIVMNAVMEACVHCGDVDLALKVFDEMTKPESCGVDNVTYGTLLKGLGEAR 137
Query: 247 RIDEAFQILESVENGTAVGSPKLSPRLIYGLLNALLEAGDMRRANGLVACYRVVLNKE-E 423
RID+AFQ+LESVE GTAVGSP+LS L+ LLNAL EAGD+RRANGL+A Y VL+++
Sbjct: 138 RIDDAFQLLESVEQGTAVGSPELSAPLVCSLLNALTEAGDLRRANGLLARYGSVLHEDGS 197
Query: 424 DQVLLYNLLMKGYLKTDFPQGALTI 498
+L+YNLLMKGY+ FP AL++
Sbjct: 198 PSILMYNLLMKGYITAGFPMAALSV 222
Score = 58.2 bits (139), Expect(2) = 9e-60
Identities = 28/47 (59%), Positives = 35/47 (74%)
Frame = +2
Query: 476 SLKVH*L*DEILRQGLKPDKVTYNTLVFTCVKSGDLDAAFQLITEMK 616
+L VH DEIL+QGLKPD++TYNTL+F CVK+ LD A + EMK
Sbjct: 219 ALSVH---DEILQQGLKPDRLTYNTLIFACVKTEKLDTAMRYFEEMK 262
>ref|XP_002280516.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g10690-like [Vitis vinifera]
Length = 609
Score = 196 bits (499), Expect(2) = 3e-59
Identities = 96/145 (66%), Positives = 121/145 (83%), Gaps = 1/145 (0%)
Frame = +1
Query: 67 AKKRYGKLSTAVMNAVMEACVHCRDIESSIQVFEEMAKPESCGVDDISYGILLKGLGEAR 246
AK+R+GKL+T VMNAVMEACVHC D++ +++VF EM KPESCGVD+++YG LLKGLGEAR
Sbjct: 78 AKRRHGKLNTIVMNAVMEACVHCGDVDLALKVFGEMTKPESCGVDNVTYGTLLKGLGEAR 137
Query: 247 RIDEAFQILESVENGTAVGSPKLSPRLIYGLLNALLEAGDMRRANGLVACYRVVLNKE-E 423
RID+AFQ+LESVE GTAVGSP+LS L+ LLNAL EAGD+RRANGL+A Y VL+++
Sbjct: 138 RIDDAFQLLESVEQGTAVGSPELSAPLVCSLLNALTEAGDLRRANGLLARYGSVLHEDGS 197
Query: 424 DQVLLYNLLMKGYLKTDFPQGALTI 498
+L+YNLLMKGY+ FP AL++
Sbjct: 198 PSILMYNLLMKGYITAGFPMAALSV 222
Score = 58.2 bits (139), Expect(2) = 3e-59
Identities = 28/47 (59%), Positives = 35/47 (74%)
Frame = +2
Query: 476 SLKVH*L*DEILRQGLKPDKVTYNTLVFTCVKSGDLDAAFQLITEMK 616
+L VH DEIL+QGLKPD++TYNTL+F CVK+ LD A + EMK
Sbjct: 219 ALSVH---DEILQQGLKPDRLTYNTLIFACVKTEKLDTAMRYFEEMK 262
>emb|CBI20759.3| unnamed protein product [Vitis vinifera]
Length = 570
Score = 196 bits (499), Expect(2) = 3e-59
Identities = 96/145 (66%), Positives = 121/145 (83%), Gaps = 1/145 (0%)
Frame = +1
Query: 67 AKKRYGKLSTAVMNAVMEACVHCRDIESSIQVFEEMAKPESCGVDDISYGILLKGLGEAR 246
AK+R+GKL+T VMNAVMEACVHC D++ +++VF EM KPESCGVD+++YG LLKGLGEAR
Sbjct: 95 AKRRHGKLNTIVMNAVMEACVHCGDVDLALKVFGEMTKPESCGVDNVTYGTLLKGLGEAR 154
Query: 247 RIDEAFQILESVENGTAVGSPKLSPRLIYGLLNALLEAGDMRRANGLVACYRVVLNKE-E 423
RID+AFQ+LESVE GTAVGSP+LS L+ LLNAL EAGD+RRANGL+A Y VL+++
Sbjct: 155 RIDDAFQLLESVEQGTAVGSPELSAPLVCSLLNALTEAGDLRRANGLLARYGSVLHEDGS 214
Query: 424 DQVLLYNLLMKGYLKTDFPQGALTI 498
+L+YNLLMKGY+ FP AL++
Sbjct: 215 PSILMYNLLMKGYITAGFPMAALSV 239
Score = 58.2 bits (139), Expect(2) = 3e-59
Identities = 28/47 (59%), Positives = 35/47 (74%)
Frame = +2
Query: 476 SLKVH*L*DEILRQGLKPDKVTYNTLVFTCVKSGDLDAAFQLITEMK 616
+L VH DEIL+QGLKPD++TYNTL+F CVK+ LD A + EMK
Sbjct: 236 ALSVH---DEILQQGLKPDRLTYNTLIFACVKTEKLDTAMRYFEEMK 279
>gb|ACN26818.1| unknown [Zea mays] gi|414589544|tpg|DAA40115.1| TPA: hypothetical
protein ZEAMMB73_157272 [Zea mays]
Length = 620
Score = 189 bits (480), Expect(2) = 2e-56
Identities = 93/139 (66%), Positives = 116/139 (83%)
Frame = +1
Query: 82 GKLSTAVMNAVMEACVHCRDIESSIQVFEEMAKPESCGVDDISYGILLKGLGEARRIDEA 261
G L+T VMNAV+EACV C D++ ++++FEEM P CGVDD+SYGILLKGLG ARRIDEA
Sbjct: 90 GLLNTIVMNAVLEACVRCGDVDRALRLFEEMRGPMGCGVDDVSYGILLKGLGIARRIDEA 149
Query: 262 FQILESVENGTAVGSPKLSPRLIYGLLNALLEAGDMRRANGLVACYRVVLNKEEDQVLLY 441
F+ILES+E +++G P+LSP LI G LNAL+EAGDMRRAN LVA +R+VL E+ VLLY
Sbjct: 150 FEILESIEKDSSIGGPRLSPHLICGFLNALIEAGDMRRANALVARFRMVL-YEDHSVLLY 208
Query: 442 NLLMKGYLKTDFPQGALTI 498
NLLMKGY+K++FP GALT+
Sbjct: 209 NLLMKGYIKSNFPLGALTV 227
Score = 56.2 bits (134), Expect(2) = 2e-56
Identities = 24/39 (61%), Positives = 31/39 (79%)
Frame = +2
Query: 500 DEILRQGLKPDKVTYNTLVFTCVKSGDLDAAFQLITEMK 616
DEILRQGLKPD++TYNT++ CVKS + D A Q + +MK
Sbjct: 229 DEILRQGLKPDRLTYNTIISACVKSAENDKAIQFLEDMK 267
>tpg|DAA40116.1| TPA: hypothetical protein ZEAMMB73_157272 [Zea mays]
Length = 277
Score = 189 bits (480), Expect(2) = 2e-56
Identities = 93/139 (66%), Positives = 116/139 (83%)
Frame = +1
Query: 82 GKLSTAVMNAVMEACVHCRDIESSIQVFEEMAKPESCGVDDISYGILLKGLGEARRIDEA 261
G L+T VMNAV+EACV C D++ ++++FEEM P CGVDD+SYGILLKGLG ARRIDEA
Sbjct: 90 GLLNTIVMNAVLEACVRCGDVDRALRLFEEMRGPMGCGVDDVSYGILLKGLGIARRIDEA 149
Query: 262 FQILESVENGTAVGSPKLSPRLIYGLLNALLEAGDMRRANGLVACYRVVLNKEEDQVLLY 441
F+ILES+E +++G P+LSP LI G LNAL+EAGDMRRAN LVA +R+VL E+ VLLY
Sbjct: 150 FEILESIEKDSSIGGPRLSPHLICGFLNALIEAGDMRRANALVARFRMVL-YEDHSVLLY 208
Query: 442 NLLMKGYLKTDFPQGALTI 498
NLLMKGY+K++FP GALT+
Sbjct: 209 NLLMKGYIKSNFPLGALTV 227
Score = 56.2 bits (134), Expect(2) = 2e-56
Identities = 24/39 (61%), Positives = 31/39 (79%)
Frame = +2
Query: 500 DEILRQGLKPDKVTYNTLVFTCVKSGDLDAAFQLITEMK 616
DEILRQGLKPD++TYNT++ CVKS + D A Q + +MK
Sbjct: 229 DEILRQGLKPDRLTYNTIISACVKSAENDKAIQFLEDMK 267