BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024061
         (964 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containi...   384   e-104
ref|XP_003544296.1| PREDICTED: pentatricopeptide repeat-containi...   380   e-103
ref|XP_002510452.1| pentatricopeptide repeat-containing protein,...   365   9e-99
ref|XP_002893064.1| hypothetical protein ARALYDRAFT_472198 [Arab...   353   3e-95
ref|XP_003615696.1| Pentatricopeptide repeat-containing protein ...   353   4e-95

>ref|XP_002280968.2| PREDICTED: pentatricopeptide repeat-containing protein At1g19720-like
            [Vitis vinifera]
          Length = 1545

 Score =  384 bits (987), Expect = e-104
 Identities = 188/320 (58%), Positives = 242/320 (75%)
 Frame = -1

Query: 964  SYIALLQSCIDSDSIELGRRLHSSIGSVHDLNPFVMTKLVSMYAKCGSLDDARQVFAEMR 785
            +Y+ LLQSCID  S ELGR+LH+ IG + ++NPFV TKLVSMYAKCGSL +AR+VF EMR
Sbjct: 87   TYMQLLQSCIDQGSAELGRKLHARIGLLEEMNPFVETKLVSMYAKCGSLGEARKVFGEMR 146

Query: 784  ERNLFAWSAMINGCSREHRWEEVIDLFAEMMWEGVILDKLLFPKILQACANTGDLKTGML 605
            ERNL+AWSAMI   SRE  W EV+  F  MM +G++ D+ L PKILQAC N GD +TG L
Sbjct: 147  ERNLYAWSAMIGAYSREQMWREVVQHFFFMMEDGIVPDEFLLPKILQACGNCGDAETGKL 206

Query: 604  LHSLAVRGGFLNSPVEAQVGNAILAMYAKCGIFGAAKKFFRKMAVKDLVSWNSIISAHCQ 425
            +HSL +R G        +V N+ILA+YAKCG    A++FF  M  +D VSWNSII+ +CQ
Sbjct: 207  IHSLVIRCGM---NFNIRVSNSILAVYAKCGRLSCARRFFENMDYRDRVSWNSIITGYCQ 263

Query: 424  CGEHEQAFWLFERMKDEGIEPGVVTWNILISSYNHLGHTDEAMQLMKQMENSGVAPDVFT 245
             GE E++  LFE+M++EGIEPG+VTWNILI+SY+  G  D+AM+LMK+ME+  + PDVFT
Sbjct: 264  KGELEKSHQLFEKMQEEGIEPGLVTWNILINSYSQSGKCDDAMELMKKMESFRIVPDVFT 323

Query: 244  WTSLMSGFVQNNRVNEALDLFIDMQLARVEPNEMTIACVISACASLKCLRKGRELHSYAI 65
            WTS++SGF QNNR ++AL+LF +M LA +EPN +T+   ISACASLK L+KG ELHS A+
Sbjct: 324  WTSMISGFAQNNRRSQALELFREMLLAGIEPNGVTVTSGISACASLKALKKGMELHSVAV 383

Query: 64   KRDSASSVLVGNALVDMYAK 5
            K      +LVGN+L+DMY+K
Sbjct: 384  KIGCVEDLLVGNSLIDMYSK 403



 Score =  197 bits (500), Expect = 4e-48
 Identities = 102/287 (35%), Positives = 171/287 (59%), Gaps = 5/287 (1%)
 Frame = -1

Query: 850  LVSMYAKCGSLDDARQVFAEMRE----RNLFAWSAMINGCSREHRWEEVIDLFAEMMWEG 683
            L++ Y++ G  DDA ++  +M       ++F W++MI+G ++ +R  + ++LF EM+  G
Sbjct: 292  LINSYSQSGKCDDAMELMKKMESFRIVPDVFTWTSMISGFAQNNRRSQALELFREMLLAG 351

Query: 682  VILDKLLFPKILQACANTGDLKTGMLLHSLAVRGGFLNSPVEAQVGNAILAMYAKCGIFG 503
            +  + +     + ACA+   LK GM LHS+AV+ G +    +  VGN+++ MY+K G   
Sbjct: 352  IEPNGVTVTSGISACASLKALKKGMELHSVAVKIGCVE---DLLVGNSLIDMYSKSGELE 408

Query: 502  AAKKFFRKMAVKDLVSWNSIISAHCQCGEHEQAFWLFERMKDEGIEPGVVTWNILISSYN 323
             A++ F  +  KD+ +WNS+I  +CQ G   +A+ LF +M +  + P VVTWN +IS Y 
Sbjct: 409  DARRVFDMILKKDVYTWNSMIGGYCQAGYCGKAYDLFIKMHESDVPPNVVTWNAMISGYI 468

Query: 322  HLGHTDEAMQLMKQMENSG-VAPDVFTWTSLMSGFVQNNRVNEALDLFIDMQLARVEPNE 146
              G  D+AM L  +ME  G +  D  +W SL++G++QN   N+AL +F  MQ   + PN 
Sbjct: 469  QNGDEDQAMDLFHRMEKDGLIKRDTASWNSLIAGYLQNGHKNKALGIFRQMQSFCIRPNS 528

Query: 145  MTIACVISACASLKCLRKGRELHSYAIKRDSASSVLVGNALVDMYAK 5
            +T+  ++ ACA+L   +K +E+H   ++R+  S + V N L+D YAK
Sbjct: 529  VTMLSILPACANLVAAKKVKEIHGCILRRNLGSELSVANCLIDTYAK 575



 Score = 92.4 bits (228), Expect = 1e-16
 Identities = 83/352 (23%), Positives = 149/352 (42%), Gaps = 75/352 (21%)
 Frame = -1

Query: 949  LQSCIDSDSIELGRRLHS---SIGSVHDLNPFVMTKLVSMYAKCGSLDDARQVFAEMRER 779
            + +C    +++ G  LHS    IG V DL   V   L+ MY+K G L+DAR+VF  + ++
Sbjct: 363  ISACASLKALKKGMELHSVAVKIGCVEDL--LVGNSLIDMYSKSGELEDARRVFDMILKK 420

Query: 778  -----------------------------------NLFAWSAMINGCSREHRWEEVIDLF 704
                                               N+  W+AMI+G  +    ++ +DLF
Sbjct: 421  DVYTWNSMIGGYCQAGYCGKAYDLFIKMHESDVPPNVVTWNAMISGYIQNGDEDQAMDLF 480

Query: 703  AEMMWEGVIL------------------------------------DKLLFPKILQACAN 632
              M  +G+I                                     + +    IL ACAN
Sbjct: 481  HRMEKDGLIKRDTASWNSLIAGYLQNGHKNKALGIFRQMQSFCIRPNSVTMLSILPACAN 540

Query: 631  TGDLKTGMLLHSLAVRGGFLNSPVEAQVGNAILAMYAKCGIFGAAKKFFRKMAVKDLVSW 452
                K    +H   +R    N   E  V N ++  YAK G    A+  F+ ++ KD++SW
Sbjct: 541  LVAAKKVKEIHGCILRR---NLGSELSVANCLIDTYAKSGNIVYAQTIFQGISSKDIISW 597

Query: 451  NSIISAHCQCGEHEQAFWLFERMKDEGIEPGVVTWNILISSYNHLGHTDEAMQLM-KQME 275
            NS+I+ +   G  + A  LF++M   G++P   T+  +I +++  G  D+  Q+    ME
Sbjct: 598  NSLIAGYVLHGCSDSALDLFDQMTKMGVKPSRGTFLSIIYAFSLSGMVDKGKQVFSSMME 657

Query: 274  NSGVAPDVFTWTSLMSGFVQNNRVNEALDLFIDMQLARVEPNEMTIACVISA 119
            +  + P +   ++++    ++ ++ EA++   DM    +EP+    A +++A
Sbjct: 658  DYQILPGLEHHSAMIDLLGRSGKLGEAIEFIEDM---AIEPDSCIWAALLTA 706


>ref|XP_003544296.1| PREDICTED: pentatricopeptide repeat-containing protein At1g19720-like
            [Glycine max]
          Length = 945

 Score =  380 bits (977), Expect = e-103
 Identities = 183/320 (57%), Positives = 237/320 (74%)
 Frame = -1

Query: 964  SYIALLQSCIDSDSIELGRRLHSSIGSVHDLNPFVMTKLVSMYAKCGSLDDARQVFAEMR 785
            +++ LLQ+CID D I +GR LH+ IG V  +NPFV TKLVSMYAKCG LD+AR+VF EMR
Sbjct: 86   TFMNLLQACIDKDCILVGRELHTRIGLVRKVNPFVETKLVSMYAKCGHLDEARKVFDEMR 145

Query: 784  ERNLFAWSAMINGCSREHRWEEVIDLFAEMMWEGVILDKLLFPKILQACANTGDLKTGML 605
            ERNLF WSAMI  CSR+ +WEEV++LF +MM  GV+ D  L PK+L+AC    D++TG L
Sbjct: 146  ERNLFTWSAMIGACSRDLKWEEVVELFYDMMQHGVLPDDFLLPKVLKACGKFRDIETGRL 205

Query: 604  LHSLAVRGGFLNSPVEAQVGNAILAMYAKCGIFGAAKKFFRKMAVKDLVSWNSIISAHCQ 425
            +HSL +RGG  +S     V N+ILA+YAKCG    A+K FR+M  ++ VSWN II+ +CQ
Sbjct: 206  IHSLVIRGGMCSS---LHVNNSILAVYAKCGEMSCAEKIFRRMDERNCVSWNVIITGYCQ 262

Query: 424  CGEHEQAFWLFERMKDEGIEPGVVTWNILISSYNHLGHTDEAMQLMKQMENSGVAPDVFT 245
             GE EQA   F+ M++EG+EPG+VTWNILI+SY+ LGH D AM LM++ME+ G+ PDV+T
Sbjct: 263  RGEIEQAQKYFDAMQEEGMEPGLVTWNILIASYSQLGHCDIAMDLMRKMESFGITPDVYT 322

Query: 244  WTSLMSGFVQNNRVNEALDLFIDMQLARVEPNEMTIACVISACASLKCLRKGRELHSYAI 65
            WTS++SGF Q  R+NEA DL  DM +  VEPN +TIA   SACAS+K L  G E+HS A+
Sbjct: 323  WTSMISGFTQKGRINEAFDLLRDMLIVGVEPNSITIASAASACASVKSLSMGSEIHSIAV 382

Query: 64   KRDSASSVLVGNALVDMYAK 5
            K      +L+GN+L+DMYAK
Sbjct: 383  KTSMVDDILIGNSLIDMYAK 402



 Score =  188 bits (477), Expect = 2e-45
 Identities = 98/287 (34%), Positives = 166/287 (57%), Gaps = 5/287 (1%)
 Frame = -1

Query: 850  LVSMYAKCGSLDDARQVFAEMRE----RNLFAWSAMINGCSREHRWEEVIDLFAEMMWEG 683
            L++ Y++ G  D A  +  +M       +++ W++MI+G +++ R  E  DL  +M+  G
Sbjct: 291  LIASYSQLGHCDIAMDLMRKMESFGITPDVYTWTSMISGFTQKGRINEAFDLLRDMLIVG 350

Query: 682  VILDKLLFPKILQACANTGDLKTGMLLHSLAVRGGFLNSPVEAQVGNAILAMYAKCGIFG 503
            V  + +       ACA+   L  G  +HS+AV+   ++   +  +GN+++ MYAK G   
Sbjct: 351  VEPNSITIASAASACASVKSLSMGSEIHSIAVKTSMVD---DILIGNSLIDMYAKGGDLE 407

Query: 502  AAKKFFRKMAVKDLVSWNSIISAHCQCGEHEQAFWLFERMKDEGIEPGVVTWNILISSYN 323
            AA+  F  M  +D+ SWNSII  +CQ G   +A  LF +M++    P VVTWN++I+ + 
Sbjct: 408  AAQSIFDVMLERDVYSWNSIIGGYCQAGFCGKAHELFMKMQESDSPPNVVTWNVMITGFM 467

Query: 322  HLGHTDEAMQLMKQMENSG-VAPDVFTWTSLMSGFVQNNRVNEALDLFIDMQLARVEPNE 146
              G  DEA+ L  ++E  G + P+V +W SL+SGF+QN + ++AL +F  MQ + + PN 
Sbjct: 468  QNGDEDEALNLFLRIEKDGKIKPNVASWNSLISGFLQNRQKDKALQIFRQMQFSNMAPNL 527

Query: 145  MTIACVISACASLKCLRKGRELHSYAIKRDSASSVLVGNALVDMYAK 5
            +T+  ++ AC +L   +K +E+H  A +R+  S + V N  +D YAK
Sbjct: 528  VTVLTILPACTNLVAAKKVKEIHCCATRRNLVSELSVSNTFIDSYAK 574



 Score =  100 bits (250), Expect = 4e-19
 Identities = 67/262 (25%), Positives = 133/262 (50%), Gaps = 8/262 (3%)
 Frame = -1

Query: 877  DLNPFVMT--KLVSMYAKCGSLDDARQVFAEMRER-----NLFAWSAMINGCSREHRWEE 719
            D  P V+T   +++ + + G  D+A  +F  + +      N+ +W+++I+G  +  + ++
Sbjct: 451  DSPPNVVTWNVMITGFMQNGDEDEALNLFLRIEKDGKIKPNVASWNSLISGFLQNRQKDK 510

Query: 718  VIDLFAEMMWEGVILDKLLFPKILQACANTGDLKTGMLLHSLAVRGGFLNSPVEAQVGNA 539
             + +F +M +  +  + +    IL AC N    K    +H  A R   ++   E  V N 
Sbjct: 511  ALQIFRQMQFSNMAPNLVTVLTILPACTNLVAAKKVKEIHCCATRRNLVS---ELSVSNT 567

Query: 538  ILAMYAKCGIFGAAKKFFRKMAVKDLVSWNSIISAHCQCGEHEQAFWLFERMKDEGIEPG 359
             +  YAK G    ++K F  ++ KD++SWNS++S +   G  E A  LF++M+ +G+ P 
Sbjct: 568  FIDSYAKSGNIMYSRKVFDGLSPKDIISWNSLLSGYVLHGCSESALDLFDQMRKDGLHPS 627

Query: 358  VVTWNILISSYNHLGHTDEAMQLMKQM-ENSGVAPDVFTWTSLMSGFVQNNRVNEALDLF 182
             VT   +IS+Y+H    DE       + E   +  D+  +++++    ++ ++ +AL+  
Sbjct: 628  RVTLTSIISAYSHAEMVDEGKHAFSNISEEYQIRLDLEHYSAMVYLLGRSGKLAKALEFI 687

Query: 181  IDMQLARVEPNEMTIACVISAC 116
             +M    VEPN    A +++AC
Sbjct: 688  QNMP---VEPNSSVWAALLTAC 706



 Score = 70.5 bits (171), Expect = 6e-10
 Identities = 35/113 (30%), Positives = 63/113 (55%)
 Frame = -1

Query: 340 LISSYNHLGHTDEAMQLMKQMENSGVAPDVFTWTSLMSGFVQNNRVNEALDLFIDMQLAR 161
           L+S Y   GH DEA ++  +M       ++FTW++++    ++ +  E ++LF DM    
Sbjct: 124 LVSMYAKCGHLDEARKVFDEMRER----NLFTWSAMIGACSRDLKWEEVVELFYDMMQHG 179

Query: 160 VEPNEMTIACVISACASLKCLRKGRELHSYAIKRDSASSVLVGNALVDMYAKC 2
           V P++  +  V+ AC   + +  GR +HS  I+    SS+ V N+++ +YAKC
Sbjct: 180 VLPDDFLLPKVLKACGKFRDIETGRLIHSLVIRGGMCSSLHVNNSILAVYAKC 232


>ref|XP_002510452.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223551153|gb|EEF52639.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 1218

 Score =  365 bits (937), Expect = 9e-99
 Identities = 178/321 (55%), Positives = 238/321 (74%)
 Frame = -1

Query: 964  SYIALLQSCIDSDSIELGRRLHSSIGSVHDLNPFVMTKLVSMYAKCGSLDDARQVFAEMR 785
            ++I+LLQSCID +S+ LGR++H+    V + NPF+ TKLVSMYAKCGSL DAR++F EMR
Sbjct: 76   TFISLLQSCIDCNSVTLGRKVHAHFHLVQEKNPFLETKLVSMYAKCGSLSDARKLFGEMR 135

Query: 784  ERNLFAWSAMINGCSREHRWEEVIDLFAEMMWEGVILDKLLFPKILQACANTGDLKTGML 605
            E+NL+ WSAMI   SREHRW+EV++LF  MM E  + D  L PKILQAC N+ D+K+G +
Sbjct: 136  EKNLYTWSAMIGAFSREHRWKEVVELFYMMMEENCLPDAFLLPKILQACGNSRDIKSGEM 195

Query: 604  LHSLAVRGGFLNSPVEAQVGNAILAMYAKCGIFGAAKKFFRKMAVKDLVSWNSIISAHCQ 425
            +HSLA++ G    P    V N+ILA+YAKCG    A K F  M   +  +WN++IS +CQ
Sbjct: 196  VHSLAIKCGVDGYPF---VNNSILAVYAKCGKLSLASKCFEMMDKSETAAWNALISGYCQ 252

Query: 424  CGEHEQAFWLFERMKDEGIEPGVVTWNILISSYNHLGHTDEAMQLMKQMENSGVAPDVFT 245
             G+ E+A  LF+ M++EGIEPG+V+WNILI+ YN LG+ D AM+LMK+ME  G +PDV T
Sbjct: 253  HGQIEEAQRLFDAMREEGIEPGLVSWNILIAGYNQLGYFDIAMELMKKMEVLGTSPDVVT 312

Query: 244  WTSLMSGFVQNNRVNEALDLFIDMQLARVEPNEMTIACVISACASLKCLRKGRELHSYAI 65
            WTS++SG  QN++ ++AL LF DM LARVEPN +TI+  +SACASLK L +G E+H+ A+
Sbjct: 313  WTSMISGLAQNDKASKALHLFNDMILARVEPNGVTISSAVSACASLKVLNEGLEIHALAV 372

Query: 64   KRDSASSVLVGNALVDMYAKC 2
            K      VLVGN+L+DMY+KC
Sbjct: 373  KLGFVEDVLVGNSLIDMYSKC 393



 Score =  178 bits (451), Expect = 2e-42
 Identities = 115/388 (29%), Positives = 190/388 (48%), Gaps = 72/388 (18%)
 Frame = -1

Query: 952  LLQSCIDSDSIELGRRLHS-SIGSVHDLNPFVMTKLVSMYAKCGSL-------------- 818
            +LQ+C +S  I+ G  +HS +I    D  PFV   ++++YAKCG L              
Sbjct: 180  ILQACGNSRDIKSGEMVHSLAIKCGVDGYPFVNNSILAVYAKCGKLSLASKCFEMMDKSE 239

Query: 817  -----------------DDARQVFAEMRERNL---------------------------- 773
                             ++A+++F  MRE  +                            
Sbjct: 240  TAAWNALISGYCQHGQIEEAQRLFDAMREEGIEPGLVSWNILIAGYNQLGYFDIAMELMK 299

Query: 772  -----------FAWSAMINGCSREHRWEEVIDLFAEMMWEGVILDKLLFPKILQACANTG 626
                         W++MI+G ++  +  + + LF +M+   V  + +     + ACA+  
Sbjct: 300  KMEVLGTSPDVVTWTSMISGLAQNDKASKALHLFNDMILARVEPNGVTISSAVSACASLK 359

Query: 625  DLKTGMLLHSLAVRGGFLNSPVEAQVGNAILAMYAKCGIFGAAKKFFRKMAVKDLVSWNS 446
             L  G+ +H+LAV+ GF+    +  VGN+++ MY+KCG    A K F  M  KD+ +WNS
Sbjct: 360  VLNEGLEIHALAVKLGFVE---DVLVGNSLIDMYSKCGKLENAWKVFDMMPEKDVYTWNS 416

Query: 445  IISAHCQCGEHEQAFWLFERMKDEGIEPGVVTWNILISSYNHLGHTDEAMQLMKQMENSG 266
            +I  +CQ G   +A  LF +M+    +P  +TWN +I  Y H G  D+AM L ++ME  G
Sbjct: 417  MIGGYCQVGYCGKAHMLFMKMQKSETQPNAITWNNMIWGYIHNGDEDQAMDLFRRMEEDG 476

Query: 265  -VAPDVFTWTSLMSGFVQNNRVNEALDLFIDMQLARVEPNEMTIACVISACASLKCLRKG 89
             +  D  +W SL+SG++Q  + ++AL +F  MQ   +  N +TI  V+ ACA+L  L+  
Sbjct: 477  KIKRDTASWNSLISGYLQIGQKDKALSIFRQMQSFSININSVTILSVLPACANLIALKMV 536

Query: 88   RELHSYAIKRDSASSVLVGNALVDMYAK 5
            +E+H   I+R+  S + + N+L+D YAK
Sbjct: 537  KEIHGCVIRRNLDSLLPITNSLIDTYAK 564



 Score = 75.9 bits (185), Expect = 1e-11
 Identities = 64/277 (23%), Positives = 112/277 (40%), Gaps = 74/277 (26%)
 Frame = -1

Query: 949  LQSCIDSDSIELGRRLHS---SIGSVHDLNPFVMTKLVSMYAKCGSLDDARQVFAEMRER 779
            + +C     +  G  +H+    +G V D+   V   L+ MY+KCG L++A +VF  M E+
Sbjct: 352  VSACASLKVLNEGLEIHALAVKLGFVEDV--LVGNSLIDMYSKCGKLENAWKVFDMMPEK 409

Query: 778  NLFAWSAMING------CSREH----------------RW-------------EEVIDLF 704
            +++ W++MI G      C + H                 W             ++ +DLF
Sbjct: 410  DVYTWNSMIGGYCQVGYCGKAHMLFMKMQKSETQPNAITWNNMIWGYIHNGDEDQAMDLF 469

Query: 703  AEMMWEGVI------------------------------------LDKLLFPKILQACAN 632
              M  +G I                                    ++ +    +L ACAN
Sbjct: 470  RRMEEDGKIKRDTASWNSLISGYLQIGQKDKALSIFRQMQSFSININSVTILSVLPACAN 529

Query: 631  TGDLKTGMLLHSLAVRGGFLNSPVEAQVGNAILAMYAKCGIFGAAKKFFRKMAVKDLVSW 452
               LK    +H   +R    N      + N+++  YAK G  G ++  F +   KD ++W
Sbjct: 530  LIALKMVKEIHGCVIR---RNLDSLLPITNSLIDTYAKSGNIGYSRTIFDRALFKDFITW 586

Query: 451  NSIISAHCQCGEHEQAFWLFERMKDEGIEPGVVTWNI 341
            NS+I+ +   G  + A  L ++MK  GI+P   T+++
Sbjct: 587  NSLIAGYVLFGCSDAALGLVDQMKKLGIKPNRSTFSL 623


>ref|XP_002893064.1| hypothetical protein ARALYDRAFT_472198 [Arabidopsis lyrata subsp.
            lyrata] gi|297338906|gb|EFH69323.1| hypothetical protein
            ARALYDRAFT_472198 [Arabidopsis lyrata subsp. lyrata]
          Length = 1490

 Score =  353 bits (907), Expect = 3e-95
 Identities = 178/321 (55%), Positives = 228/321 (71%)
 Frame = -1

Query: 964  SYIALLQSCIDSDSIELGRRLHSSIGSVHDLNPFVMTKLVSMYAKCGSLDDARQVFAEMR 785
            +Y+ LL+SCIDS SI LGR LH+  G   + + FV TKL+SMYAKCG L DAR+VF  MR
Sbjct: 83   TYLNLLESCIDSGSIHLGRILHARFGLFPEPDVFVETKLLSMYAKCGCLVDARKVFDSMR 142

Query: 784  ERNLFAWSAMINGCSREHRWEEVIDLFAEMMWEGVILDKLLFPKILQACANTGDLKTGML 605
            ERNL+ WSAMI   SRE+RW EV  LF  MM EGV+ D  LFPKILQ CAN GD++TG L
Sbjct: 143  ERNLYTWSAMIGAYSRENRWREVSKLFRLMMEEGVLPDDFLFPKILQGCANCGDVETGKL 202

Query: 604  LHSLAVRGGFLNSPVEAQVGNAILAMYAKCGIFGAAKKFFRKMAVKDLVSWNSIISAHCQ 425
            +HS+ ++ G  +     +V N+ILA+YAKCG +  A KFFR+M  +D+V+WNS++ A+CQ
Sbjct: 203  IHSVVIKLGMSSC---LRVSNSILAVYAKCGEWDFATKFFRRMKERDVVAWNSVLLAYCQ 259

Query: 424  CGEHEQAFWLFERMKDEGIEPGVVTWNILISSYNHLGHTDEAMQLMKQMENSGVAPDVFT 245
             G+HE+A  L E M+ EGI PG+VTWNILI  YN LG  D AM LM++MEN G+  DVFT
Sbjct: 260  NGKHEEAVELVEEMEKEGISPGLVTWNILIGGYNQLGKCDAAMDLMQKMENFGITADVFT 319

Query: 244  WTSLMSGFVQNNRVNEALDLFIDMQLARVEPNEMTIACVISACASLKCLRKGRELHSYAI 65
            WT+++SG + N    +ALD+F  M LA V PN +TI   +SAC+ LK +  G E+HS A+
Sbjct: 320  WTAMISGLIHNGMRYQALDMFRKMFLAGVVPNAVTIMSAVSACSYLKVINLGSEVHSIAV 379

Query: 64   KRDSASSVLVGNALVDMYAKC 2
            K      VLVGN+LVDMY+KC
Sbjct: 380  KMGFIDDVLVGNSLVDMYSKC 400



 Score =  188 bits (477), Expect = 2e-45
 Identities = 99/287 (34%), Positives = 165/287 (57%), Gaps = 5/287 (1%)
 Frame = -1

Query: 850  LVSMYAKCGSLDDARQVFAEMRE----RNLFAWSAMINGCSREHRWEEVIDLFAEMMWEG 683
            L+  Y + G  D A  +  +M       ++F W+AMI+G        + +D+F +M   G
Sbjct: 288  LIGGYNQLGKCDAAMDLMQKMENFGITADVFTWTAMISGLIHNGMRYQALDMFRKMFLAG 347

Query: 682  VILDKLLFPKILQACANTGDLKTGMLLHSLAVRGGFLNSPVEAQVGNAILAMYAKCGIFG 503
            V+ + +     + AC+    +  G  +HS+AV+ GF++   +  VGN+++ MY+KCG   
Sbjct: 348  VVPNAVTIMSAVSACSYLKVINLGSEVHSIAVKMGFID---DVLVGNSLVDMYSKCGKLE 404

Query: 502  AAKKFFRKMAVKDLVSWNSIISAHCQCGEHEQAFWLFERMKDEGIEPGVVTWNILISSYN 323
             A+K F  +  KD+ +WNS+I+ +CQ G   +A+ LF RM+D  + P ++TWN +IS Y 
Sbjct: 405  DARKVFDSVKNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANVRPNIITWNTMISGYI 464

Query: 322  HLGHTDEAMQLMKQMENSG-VAPDVFTWTSLMSGFVQNNRVNEALDLFIDMQLARVEPNE 146
              G   EAM L ++ME  G V  +  TW  +++G++QN + ++AL++F  MQ +R  PN 
Sbjct: 465  KNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDDALEIFRKMQFSRFMPNS 524

Query: 145  MTIACVISACASLKCLRKGRELHSYAIKRDSASSVLVGNALVDMYAK 5
            +TI  ++ ACA+L   +  RE+H   ++R+  +   V NAL D YAK
Sbjct: 525  VTILSLLPACANLLGTKMVREIHGCVLRRNLDAIHAVKNALTDTYAK 571



 Score =  101 bits (252), Expect = 2e-19
 Identities = 65/246 (26%), Positives = 119/246 (48%), Gaps = 6/246 (2%)
 Frame = -1

Query: 871  NPFVMTKLVSMYAKCGSLDDARQVFAEMR-----ERNLFAWSAMINGCSREHRWEEVIDL 707
            N      ++S Y K G   +A  +F  M      +RN   W+ +I G  +  + ++ +++
Sbjct: 452  NIITWNTMISGYIKNGDEGEAMDLFQRMEKDGKVQRNTATWNLIIAGYIQNGKKDDALEI 511

Query: 706  FAEMMWEGVILDKLLFPKILQACANTGDLKTGMLLHSLAVRGGFLNSPVEAQVGNAILAM 527
            F +M +   + + +    +L ACAN    K    +H   +R    N      V NA+   
Sbjct: 512  FRKMQFSRFMPNSVTILSLLPACANLLGTKMVREIHGCVLRR---NLDAIHAVKNALTDT 568

Query: 526  YAKCGIFGAAKKFFRKMAVKDLVSWNSIISAHCQCGEHEQAFWLFERMKDEGIEPGVVTW 347
            YAK G  G +K  F  M  KD+++WNS+I  +   G +  A  LF +MK +GI+P   T 
Sbjct: 569  YAKSGDIGYSKTIFMGMETKDIITWNSLIGGYVLHGSYGPALELFNQMKTQGIKPNRGTL 628

Query: 346  NILISSYNHLGHTDEAMQLMKQMENS-GVAPDVFTWTSLMSGFVQNNRVNEALDLFIDMQ 170
            + +I ++  +G+ DE  ++   + N   + P +   ++++S + ++NR+ EAL    +M 
Sbjct: 629  SSIILAHGLMGNVDEGKKVFYSIANDYHIIPALEHCSAMVSLYGRSNRLEEALQFIQEMN 688

Query: 169  LARVEP 152
            +    P
Sbjct: 689  IQSETP 694



 Score = 87.8 bits (216), Expect = 3e-15
 Identities = 75/308 (24%), Positives = 138/308 (44%), Gaps = 7/308 (2%)
 Frame = -1

Query: 958  IALLQSCIDSDSIELGRRLHS---SIGSVHDLNPFVMTKLVSMYAKCGSLDDARQVFAEM 788
            ++ + +C     I LG  +HS    +G + D+   V   LV MY+KCG L+DAR+VF  +
Sbjct: 356  MSAVSACSYLKVINLGSEVHSIAVKMGFIDDV--LVGNSLVDMYSKCGKLEDARKVFDSV 413

Query: 787  RERNLFAWSAMINGCSREHRWEEVIDLFAEMMWEGVILDKLLFPKILQACANTGDLKTGM 608
            + ++++ W++MI G  +     +  +LF  M    V  + + +  ++      GD    M
Sbjct: 414  KNKDVYTWNSMITGYCQAGYCGKAYELFTRMQDANVRPNIITWNTMISGYIKNGDEGEAM 473

Query: 607  LLHSLAVRGGFLNSPVEAQVGNAILAMYAKCGIFGAAKKFFRKMA----VKDLVSWNSII 440
             L     + G +         N I+A Y + G    A + FRKM     + + V+  S++
Sbjct: 474  DLFQRMEKDGKVQR--NTATWNLIIAGYIQNGKKDDALEIFRKMQFSRFMPNSVTILSLL 531

Query: 439  SAHCQCGEHEQAFWLFERMKDEGIEPGVVTWNILISSYNHLGHTDEAMQLMKQMENSGVA 260
             A       +    +   +    ++      N L  +Y   G    +  +   ME     
Sbjct: 532  PACANLLGTKMVREIHGCVLRRNLDAIHAVKNALTDTYAKSGDIGYSKTIFMGMETK--- 588

Query: 259  PDVFTWTSLMSGFVQNNRVNEALDLFIDMQLARVEPNEMTIACVISACASLKCLRKGREL 80
             D+ TW SL+ G+V +     AL+LF  M+   ++PN  T++ +I A   +  + +G+++
Sbjct: 589  -DIITWNSLIGGYVLHGSYGPALELFNQMKTQGIKPNRGTLSSIILAHGLMGNVDEGKKV 647

Query: 79   HSYAIKRD 56
              Y+I  D
Sbjct: 648  F-YSIAND 654


>ref|XP_003615696.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|355517031|gb|AES98654.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 887

 Score =  353 bits (905), Expect = 4e-95
 Identities = 179/321 (55%), Positives = 226/321 (70%)
 Frame = -1

Query: 964  SYIALLQSCIDSDSIELGRRLHSSIGSVHDLNPFVMTKLVSMYAKCGSLDDARQVFAEMR 785
            +Y+ LLQSCID D I +G+ LHS IG V ++NPFV TKLVSMYAKCG L  AR+VF EM 
Sbjct: 85   TYMNLLQSCIDKDCIFIGKELHSRIGLVENVNPFVETKLVSMYAKCGLLGMARKVFNEMS 144

Query: 784  ERNLFAWSAMINGCSREHRWEEVIDLFAEMMWEGVILDKLLFPKILQACANTGDLKTGML 605
             RNLF WSAMI GCSR   W EV+ LF  MM +GV+ D+ L PK+LQAC    DL+TG L
Sbjct: 145  VRNLFTWSAMIGGCSRNKSWGEVVGLFYAMMRDGVLPDEFLLPKVLQACGKCRDLETGRL 204

Query: 604  LHSLAVRGGFLNSPVEAQVGNAILAMYAKCGIFGAAKKFFRKMAVKDLVSWNSIISAHCQ 425
            +HS+ +R G   S     + N+I+A+YAKCG    AKK F  M  +D V+WN++IS  CQ
Sbjct: 205  IHSMVIRRGMRWSK---HLRNSIMAVYAKCGEMDCAKKIFDCMDERDSVAWNAMISGFCQ 261

Query: 424  CGEHEQAFWLFERMKDEGIEPGVVTWNILISSYNHLGHTDEAMQLMKQMENSGVAPDVFT 245
             GE  QA   F+ M+ +G+EP +VTWNILIS YN LGH D A+ LM++ME  G+APDV+T
Sbjct: 262  NGEIGQAQKYFDAMQKDGVEPSLVTWNILISCYNQLGHCDLAIDLMRKMEWFGIAPDVYT 321

Query: 244  WTSLMSGFVQNNRVNEALDLFIDMQLARVEPNEMTIACVISACASLKCLRKGRELHSYAI 65
            WTS++SGF Q  R++ ALDL  +M LA VE N +TIA   SACA+LK L  G E+HS A+
Sbjct: 322  WTSMISGFTQKGRISHALDLLKEMFLAGVEANNITIASAASACAALKSLSMGLEIHSIAV 381

Query: 64   KRDSASSVLVGNALVDMYAKC 2
            K +   +VLVGN+L+DMY KC
Sbjct: 382  KMNLVDNVLVGNSLIDMYCKC 402



 Score =  186 bits (473), Expect = 6e-45
 Identities = 99/287 (34%), Positives = 164/287 (57%), Gaps = 5/287 (1%)
 Frame = -1

Query: 850  LVSMYAKCGSLDDARQVFAEMR----ERNLFAWSAMINGCSREHRWEEVIDLFAEMMWEG 683
            L+S Y + G  D A  +  +M       +++ W++MI+G +++ R    +DL  EM   G
Sbjct: 290  LISCYNQLGHCDLAIDLMRKMEWFGIAPDVYTWTSMISGFTQKGRISHALDLLKEMFLAG 349

Query: 682  VILDKLLFPKILQACANTGDLKTGMLLHSLAVRGGFLNSPVEAQVGNAILAMYAKCGIFG 503
            V  + +       ACA    L  G+ +HS+AV+   +++ +   VGN+++ MY KCG   
Sbjct: 350  VEANNITIASAASACAALKSLSMGLEIHSIAVKMNLVDNVL---VGNSLIDMYCKCGDLK 406

Query: 502  AAKKFFRKMAVKDLVSWNSIISAHCQCGEHEQAFWLFERMKDEGIEPGVVTWNILISSYN 323
            AA+  F  M+ +D+ SWNSII  + Q G   +A  LF +M++    P ++TWNI+I+ Y 
Sbjct: 407  AAQHIFDMMSERDVYSWNSIIGGYFQAGFCGKAHELFMKMQESDSPPNIITWNIMITGYM 466

Query: 322  HLGHTDEAMQLMKQMENSG-VAPDVFTWTSLMSGFVQNNRVNEALDLFIDMQLARVEPNE 146
              G  D+A+ L K +E  G    +  +W SL+SGFVQ+ + ++AL +F +MQ   + PN 
Sbjct: 467  QSGAEDQALDLFKSIEKDGKTKRNAASWNSLISGFVQSGQKDKALQIFRNMQFCHILPNS 526

Query: 145  MTIACVISACASLKCLRKGRELHSYAIKRDSASSVLVGNALVDMYAK 5
            +TI  ++  CA+L   +K +E+H +A++R   S + V N L+D YAK
Sbjct: 527  VTILSILPVCANLVASKKVKEIHCFAVRRILVSELSVSNLLIDSYAK 573



 Score = 98.2 bits (243), Expect = 3e-18
 Identities = 64/251 (25%), Positives = 129/251 (51%), Gaps = 6/251 (2%)
 Frame = -1

Query: 850  LVSMYAKCGSLDDARQVFAEMRE-----RNLFAWSAMINGCSREHRWEEVIDLFAEMMWE 686
            +++ Y + G+ D A  +F  + +     RN  +W+++I+G  +  + ++ + +F  M + 
Sbjct: 461  MITGYMQSGAEDQALDLFKSIEKDGKTKRNAASWNSLISGFVQSGQKDKALQIFRNMQFC 520

Query: 685  GVILDKLLFPKILQACANTGDLKTGMLLHSLAVRGGFLNSPVEAQVGNAILAMYAKCGIF 506
             ++ + +    IL  CAN    K    +H  AVR   ++   E  V N ++  YAK G  
Sbjct: 521  HILPNSVTILSILPVCANLVASKKVKEIHCFAVRRILVS---ELSVSNLLIDSYAKSGNL 577

Query: 505  GAAKKFFRKMAVKDLVSWNSIISAHCQCGEHEQAFWLFERMKDEGIEPGVVTWNILISSY 326
              +K  F +++ KD VSWNS++S++   G  E A  LF +M+ +G++P   T+  ++ +Y
Sbjct: 578  MYSKNIFNELSWKDAVSWNSMLSSYVLHGCSESALDLFYQMRKQGLQPNRGTFASILLAY 637

Query: 325  NHLGHTDEAMQLMKQM-ENSGVAPDVFTWTSLMSGFVQNNRVNEALDLFIDMQLARVEPN 149
             H G  DE   +   + ++  V   +  +++++    ++ ++ EALD    +Q   +EPN
Sbjct: 638  GHAGMVDEGKSVFSCITKDYLVRQGMEHYSAMVYLLGRSGKLAEALDF---IQSMPIEPN 694

Query: 148  EMTIACVISAC 116
                  +++AC
Sbjct: 695  SSVWGALLTAC 705



 Score = 71.2 bits (173), Expect = 3e-10
 Identities = 57/235 (24%), Positives = 102/235 (43%), Gaps = 35/235 (14%)
 Frame = -1

Query: 721 EVIDLFAEMMWEGVILDKLLFPKILQACANTGDLKTGMLLHSLAVRGGFLNSPVEAQVGN 542
           E + +   +  +G  +  + +  +LQ+C +   +  G  LHS   R G + + V   V  
Sbjct: 66  EAVTILDSLAEQGCRVKPITYMNLLQSCIDKDCIFIGKELHS---RIGLVEN-VNPFVET 121

Query: 541 AILAMYAKCGIFGAAKKFFRKMAVKDLVSWNSIISAHCQCGEHEQAFWLFERMKDEGIEP 362
            +++MYAKCG+ G A+K F +M+V++L +W+++I    +     +   LF  M  +G+ P
Sbjct: 122 KLVSMYAKCGLLGMARKVFNEMSVRNLFTWSAMIGGCSRNKSWGEVVGLFYAMMRDGVLP 181

Query: 361 GV------------------------------VTW-----NILISSYNHLGHTDEAMQLM 287
                                           + W     N +++ Y   G  D A ++ 
Sbjct: 182 DEFLLPKVLQACGKCRDLETGRLIHSMVIRRGMRWSKHLRNSIMAVYAKCGEMDCAKKIF 241

Query: 286 KQMENSGVAPDVFTWTSLMSGFVQNNRVNEALDLFIDMQLARVEPNEMTIACVIS 122
             M+      D   W +++SGF QN  + +A   F  MQ   VEP+ +T   +IS
Sbjct: 242 DCMDER----DSVAWNAMISGFCQNGEIGQAQKYFDAMQKDGVEPSLVTWNILIS 292