BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024026
         (1244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containi...   317   5e-84
ref|XP_002314110.1| predicted protein [Populus trichocarpa] gi|2...   302   1e-79
ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp....   302   1e-79
ref|NP_180537.1| pentatricopeptide repeat-containing protein [Ar...   301   2e-79
gb|AFN53666.1| hypothetical protein [Linum usitatissimum]             298   2e-78

>ref|XP_002279360.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
            chloroplastic-like [Vitis vinifera]
          Length = 743

 Score =  317 bits (811), Expect = 5e-84
 Identities = 148/241 (61%), Positives = 185/241 (76%)
 Frame = -1

Query: 1238 PRVEHYGCMVDIXXXXXXXXXXXEFIEKMPIQSGASTWGALLAACVLHKNVDLGEYACKR 1059
            P V+HY CMVDI           E IEKMP+   AS WGALL AC +H+NV L E AC +
Sbjct: 505  PGVKHYACMVDILGRAGLLEEAVELIEKMPMAPAASVWGALLGACTIHENVVLAEQACSQ 564

Query: 1058 LLELEPGNDGAYVLLSNLYAKTRKWDGVARLRKQMKNTGIKKEPGCSVVEVNGVVHEFLV 879
            L+ELEPGN GAYVLLSN+YAK  KWD V+ LRK M++ G+KKEPGCS +EV+G+VHEFLV
Sbjct: 565  LIELEPGNHGAYVLLSNIYAKAGKWDRVSGLRKLMRDVGLKKEPGCSSIEVDGIVHEFLV 624

Query: 878  GDTAHAQSEKIYLKLDEITSKLKEVGYTPDSAQVLQDIEEEEKGTKERALYLHSEKLAIA 699
            GD +H  ++KIY KLDEI ++L+ +GY P+ + +LQ +EEE+   KE+AL+LHSEKLAIA
Sbjct: 625  GDNSHPSAKKIYAKLDEIVARLETIGYVPNKSHLLQLVEEED--VKEQALFLHSEKLAIA 682

Query: 698  YGLISIKSLAPIRIAKNLRICDDCHSAAKLISSVYNRQIYLRDRYRFHHFKDGSCSCLDY 519
            +GLIS     PIRI KNLR+C DCHS AKL+S +Y+R+I LRDRYRFHHF++G CSC+DY
Sbjct: 683  FGLISTGQSQPIRIVKNLRVCGDCHSVAKLVSKLYDREILLRDRYRFHHFREGHCSCMDY 742

Query: 518  W 516
            W
Sbjct: 743  W 743


>ref|XP_002314110.1| predicted protein [Populus trichocarpa] gi|222850518|gb|EEE88065.1|
            predicted protein [Populus trichocarpa]
          Length = 738

 Score =  302 bits (774), Expect = 1e-79
 Identities = 147/243 (60%), Positives = 176/243 (72%)
 Frame = -1

Query: 1244 IEPRVEHYGCMVDIXXXXXXXXXXXEFIEKMPIQSGASTWGALLAACVLHKNVDLGEYAC 1065
            + P  +HY CMVDI           E IEKMPI   AS WGALL AC ++ NV+L E AC
Sbjct: 498  VVPGSKHYACMVDILGRAGCLEEAVELIEKMPIVPSASVWGALLGACRIYGNVELAEMAC 557

Query: 1064 KRLLELEPGNDGAYVLLSNLYAKTRKWDGVARLRKQMKNTGIKKEPGCSVVEVNGVVHEF 885
             RLLE +  N GAYVLLSN+YAK  KWD V+RLR+ MK +G++KEPGCS +EVNG++HEF
Sbjct: 558  SRLLETDSNNHGAYVLLSNIYAKAGKWDCVSRLRQHMKVSGLEKEPGCSSIEVNGIIHEF 617

Query: 884  LVGDTAHAQSEKIYLKLDEITSKLKEVGYTPDSAQVLQDIEEEEKGTKERALYLHSEKLA 705
            LVGD +H  S +IY KLDEI +++K  GY  D + +LQ +EEE    KE AL LHSEKLA
Sbjct: 618  LVGDNSHPLSTEIYSKLDEIVARIKSTGYVSDESHLLQFVEEEY--MKEHALNLHSEKLA 675

Query: 704  IAYGLISIKSLAPIRIAKNLRICDDCHSAAKLISSVYNRQIYLRDRYRFHHFKDGSCSCL 525
            IAYGLI ++   PIRI KNLR+C DCHS AKLIS +YNR I LRDRYRFHHF  G+CSC+
Sbjct: 676  IAYGLIRMEPSQPIRIVKNLRVCGDCHSVAKLISKLYNRDILLRDRYRFHHFSGGNCSCM 735

Query: 524  DYW 516
            DYW
Sbjct: 736  DYW 738


>ref|XP_002879234.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297325073|gb|EFH55493.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 740

 Score =  302 bits (773), Expect = 1e-79
 Identities = 144/243 (59%), Positives = 178/243 (73%)
 Frame = -1

Query: 1244 IEPRVEHYGCMVDIXXXXXXXXXXXEFIEKMPIQSGASTWGALLAACVLHKNVDLGEYAC 1065
            I P  +HY C+VD+           +FIE MPI    S WGALL AC +H N+ L E AC
Sbjct: 500  IVPEDKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLSLAEMAC 559

Query: 1064 KRLLELEPGNDGAYVLLSNLYAKTRKWDGVARLRKQMKNTGIKKEPGCSVVEVNGVVHEF 885
             RLLELEP NDGA+VLLSN+YAK+ KWD V+ LRK M+ TG+KKEPGCS +E++G++HEF
Sbjct: 560  TRLLELEPRNDGAHVLLSNIYAKSGKWDNVSELRKHMRVTGLKKEPGCSSIEIDGMIHEF 619

Query: 884  LVGDTAHAQSEKIYLKLDEITSKLKEVGYTPDSAQVLQDIEEEEKGTKERALYLHSEKLA 705
            L GD AH  SEK+Y KL E+  KLK  GY P+ + VLQ IEEEE   KE++L LHSEKLA
Sbjct: 620  LSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEMSHVLQIIEEEE--MKEQSLNLHSEKLA 677

Query: 704  IAYGLISIKSLAPIRIAKNLRICDDCHSAAKLISSVYNRQIYLRDRYRFHHFKDGSCSCL 525
            I YGLIS ++   IR+ KNLR+C DCH+ AKLIS +YNR+I +RDRYRFHHF++G CSC 
Sbjct: 678  ICYGLISTEAPKAIRVIKNLRMCGDCHAVAKLISQLYNREIIVRDRYRFHHFRNGQCSCN 737

Query: 524  DYW 516
            D+W
Sbjct: 738  DFW 740


>ref|NP_180537.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
            gi|75100656|sp|O82380.1|PP175_ARATH RecName:
            Full=Pentatricopeptide repeat-containing protein
            At2g29760, chloroplastic; Flags: Precursor
            gi|3582328|gb|AAC35225.1| hypothetical protein
            [Arabidopsis thaliana] gi|330253207|gb|AEC08301.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            thaliana]
          Length = 738

 Score =  301 bits (772), Expect = 2e-79
 Identities = 144/243 (59%), Positives = 179/243 (73%)
 Frame = -1

Query: 1244 IEPRVEHYGCMVDIXXXXXXXXXXXEFIEKMPIQSGASTWGALLAACVLHKNVDLGEYAC 1065
            I P  +HY C+VD+           +FIE MPI    S WGALL AC +H N++L E AC
Sbjct: 498  IVPEEKHYACIVDVLGRSGYLEKAVKFIEAMPIPPSTSVWGALLGACKIHANLNLAEMAC 557

Query: 1064 KRLLELEPGNDGAYVLLSNLYAKTRKWDGVARLRKQMKNTGIKKEPGCSVVEVNGVVHEF 885
             RLLELEP NDGA+VLLSN+YAK  KW+ V+ LRK M+ TG+KKEPGCS +E++G++HEF
Sbjct: 558  TRLLELEPRNDGAHVLLSNIYAKLGKWENVSELRKHMRVTGLKKEPGCSSIEIDGMIHEF 617

Query: 884  LVGDTAHAQSEKIYLKLDEITSKLKEVGYTPDSAQVLQDIEEEEKGTKERALYLHSEKLA 705
            L GD AH  SEK+Y KL E+  KLK  GY P+ +QVLQ IEEEE   KE++L LHSEKLA
Sbjct: 618  LSGDNAHPMSEKVYGKLHEVMEKLKSNGYEPEISQVLQIIEEEE--MKEQSLNLHSEKLA 675

Query: 704  IAYGLISIKSLAPIRIAKNLRICDDCHSAAKLISSVYNRQIYLRDRYRFHHFKDGSCSCL 525
            I YGLIS ++   IR+ KNLR+C DCHS AKLIS +Y+R+I +RDRYRFHHF++G CSC 
Sbjct: 676  ICYGLISTEAPKVIRVIKNLRVCGDCHSVAKLISQLYDREIIVRDRYRFHHFRNGQCSCN 735

Query: 524  DYW 516
            D+W
Sbjct: 736  DFW 738


>gb|AFN53666.1| hypothetical protein [Linum usitatissimum]
          Length = 850

 Score =  298 bits (763), Expect = 2e-78
 Identities = 141/243 (58%), Positives = 176/243 (72%)
 Frame = -1

Query: 1244 IEPRVEHYGCMVDIXXXXXXXXXXXEFIEKMPIQSGASTWGALLAACVLHKNVDLGEYAC 1065
            + P+ +HY CMVD+           +FIE MP+   AS WGALL AC +H N++L E AC
Sbjct: 610  VVPKTKHYSCMVDVLGRAGHLEEALKFIEGMPLAPSASVWGALLGACCIHGNLELAEKAC 669

Query: 1064 KRLLELEPGNDGAYVLLSNLYAKTRKWDGVARLRKQMKNTGIKKEPGCSVVEVNGVVHEF 885
             RLLE+EPGN GAYVLLSNLYAKT  W+GV+ LR+QM+++G+KKE GCS +E++G VHEF
Sbjct: 670  SRLLEIEPGNHGAYVLLSNLYAKTGDWEGVSELRQQMRDSGLKKETGCSSIEIDGTVHEF 729

Query: 884  LVGDTAHAQSEKIYLKLDEITSKLKEVGYTPDSAQVLQDIEEEEKGTKERALYLHSEKLA 705
            +VGD AH  S  IY KLDEI ++L+  GY  ++  +LQ +EEEE   KE+AL LHSEK+A
Sbjct: 730  IVGDNAHPLSRDIYAKLDEIMARLRSHGYVANTLCMLQFVEEEE--MKEKALKLHSEKMA 787

Query: 704  IAYGLISIKSLAPIRIAKNLRICDDCHSAAKLISSVYNRQIYLRDRYRFHHFKDGSCSCL 525
            IA+GLI   S   IRI KNLR+C DCH+ AK++S VY R I LRDRYRFHHF  G CSC 
Sbjct: 788  IAFGLIRADSQQAIRIVKNLRVCRDCHTVAKMVSKVYGRDIVLRDRYRFHHFSGGHCSCQ 847

Query: 524  DYW 516
            DYW
Sbjct: 848  DYW 850