BLASTX nr result

ID: Dioscorea21_contig00024023 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00024023
         (485 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521716.1| protein with unknown function [Ricinus commu...    67   1e-19
gb|EEE54301.1| hypothetical protein OsJ_01236 [Oryza sativa Japo...    72   9e-19
gb|EEC70381.1| hypothetical protein OsI_01329 [Oryza sativa Indi...    72   9e-19
emb|CAN62777.1| hypothetical protein VITISV_019372 [Vitis vinifera]    66   2e-18
ref|XP_002273131.2| PREDICTED: rab proteins geranylgeranyltransf...    65   4e-18

>ref|XP_002521716.1| protein with unknown function [Ricinus communis]
           gi|223539107|gb|EEF40703.1| protein with unknown
           function [Ricinus communis]
          Length = 551

 Score = 67.0 bits (162), Expect(2) = 1e-19
 Identities = 30/41 (73%), Positives = 35/41 (85%)
 Frame = -1

Query: 362 QTEMRRFPNAMGAFIYPMYGQGELPQAFCRCAAVKGALYVL 240
           Q+ + RF NA+GAFIYP+YGQGELP AFCR AAVKG +YVL
Sbjct: 274 QSSIGRFTNALGAFIYPIYGQGELPPAFCRRAAVKGCIYVL 314



 Score = 54.3 bits (129), Expect(2) = 1e-19
 Identities = 27/44 (61%), Positives = 34/44 (77%)
 Frame = -2

Query: 136 MPVVSLLMDEQNKLCKGVRLTSGQEILSSQLVMNPSFAVENSGS 5
           MPVV+LLMD+ N   KG+RL SGQEI S +LV++PSF V +S S
Sbjct: 316 MPVVALLMDKNNGNYKGIRLASGQEIYSQKLVLDPSFTVPSSPS 359


>gb|EEE54301.1| hypothetical protein OsJ_01236 [Oryza sativa Japonica Group]
          Length = 550

 Score = 72.4 bits (176), Expect(2) = 9e-19
 Identities = 33/36 (91%), Positives = 33/36 (91%)
 Frame = -1

Query: 347 RFPNAMGAFIYPMYGQGELPQAFCRCAAVKGALYVL 240
           RF NA GAFIYPMYG GELPQAFCRCAAVKGALYVL
Sbjct: 283 RFANAEGAFIYPMYGHGELPQAFCRCAAVKGALYVL 318



 Score = 45.8 bits (107), Expect(2) = 9e-19
 Identities = 19/39 (48%), Positives = 29/39 (74%)
 Frame = -2

Query: 136 MPVVSLLMDEQNKLCKGVRLTSGQEILSSQLVMNPSFAV 20
           MP  +LL+DE+ K   G+RL SGQ+IL  QL+++PS+ +
Sbjct: 320 MPATALLVDEEKKRYVGIRLASGQDILCQQLILDPSYEI 358


>gb|EEC70381.1| hypothetical protein OsI_01329 [Oryza sativa Indica Group]
          Length = 485

 Score = 72.4 bits (176), Expect(2) = 9e-19
 Identities = 33/36 (91%), Positives = 33/36 (91%)
 Frame = -1

Query: 347 RFPNAMGAFIYPMYGQGELPQAFCRCAAVKGALYVL 240
           RF NA GAFIYPMYG GELPQAFCRCAAVKGALYVL
Sbjct: 218 RFANAEGAFIYPMYGHGELPQAFCRCAAVKGALYVL 253



 Score = 45.8 bits (107), Expect(2) = 9e-19
 Identities = 19/39 (48%), Positives = 29/39 (74%)
 Frame = -2

Query: 136 MPVVSLLMDEQNKLCKGVRLTSGQEILSSQLVMNPSFAV 20
           MP  +LL+DE+ K   G+RL SGQ+IL  QL+++PS+ +
Sbjct: 255 MPATALLVDEEKKRYVGIRLASGQDILCQQLILDPSYEI 293


>emb|CAN62777.1| hypothetical protein VITISV_019372 [Vitis vinifera]
          Length = 812

 Score = 66.2 bits (160), Expect(2) = 2e-18
 Identities = 29/38 (76%), Positives = 34/38 (89%)
 Frame = -1

Query: 353 MRRFPNAMGAFIYPMYGQGELPQAFCRCAAVKGALYVL 240
           +R+FPNA+GA IYP+YGQGEL QAFCR AAVKG +YVL
Sbjct: 343 IRKFPNALGALIYPIYGQGELTQAFCRRAAVKGCIYVL 380



 Score = 50.8 bits (120), Expect(2) = 2e-18
 Identities = 22/39 (56%), Positives = 33/39 (84%)
 Frame = -2

Query: 136 MPVVSLLMDEQNKLCKGVRLTSGQEILSSQLVMNPSFAV 20
           MPV++LLM++++  CKGVRL SGQ+I S +L+++PSF V
Sbjct: 382 MPVIALLMEKESGHCKGVRLASGQDIFSQKLLVDPSFIV 420


>ref|XP_002273131.2| PREDICTED: rab proteins geranylgeranyltransferase component A
           2-like [Vitis vinifera] gi|296088658|emb|CBI37649.3|
           unnamed protein product [Vitis vinifera]
          Length = 556

 Score = 65.1 bits (157), Expect(2) = 4e-18
 Identities = 29/36 (80%), Positives = 32/36 (88%)
 Frame = -1

Query: 347 RFPNAMGAFIYPMYGQGELPQAFCRCAAVKGALYVL 240
           RFPNA+GA IYP+YGQGEL QAFCR AAVKG +YVL
Sbjct: 279 RFPNALGALIYPIYGQGELTQAFCRRAAVKGCIYVL 314



 Score = 50.8 bits (120), Expect(2) = 4e-18
 Identities = 22/39 (56%), Positives = 33/39 (84%)
 Frame = -2

Query: 136 MPVVSLLMDEQNKLCKGVRLTSGQEILSSQLVMNPSFAV 20
           MPV++LLM++++  CKGVRL SGQ+I S +L+++PSF V
Sbjct: 316 MPVIALLMEKESGHCKGVRLASGQDIFSQKLLVDPSFIV 354


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