BLASTX nr result

ID: Dioscorea21_contig00023991 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00023991
         (1006 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271627.2| PREDICTED: uncharacterized protein LOC100243...   142   1e-31
emb|CBI36980.3| unnamed protein product [Vitis vinifera]              142   1e-31
ref|XP_002515642.1| RNA binding protein, putative [Ricinus commu...   140   4e-31
ref|XP_002515641.1| RNA binding protein, putative [Ricinus commu...   136   7e-30
emb|CAN64022.1| hypothetical protein VITISV_005264 [Vitis vinifera]   136   7e-30

>ref|XP_002271627.2| PREDICTED: uncharacterized protein LOC100243428 [Vitis vinifera]
          Length = 1214

 Score =  142 bits (359), Expect = 1e-31
 Identities = 76/196 (38%), Positives = 116/196 (59%)
 Frame = -2

Query: 780  TLPFEKNSAMWKPFESLEVFHMMPQQPHFRALEQYCEEFREGMAIGFMVTFANLINDLSK 601
            +LPF K+S +W   E+LEVF  MPQ+PHFR LE   EE REG+AIG MVTF+ LI  ++K
Sbjct: 1026 SLPFVKSSPIWNTLETLEVFQRMPQKPHFRPLENCKEERREGLAIGNMVTFSTLIEKVAK 1085

Query: 600  LRITDSTEVFLAKLKALPRLEANGFDVQCLRSRIEKLLKIKCELNQHEMKRASLDEQISE 421
            LR  D   +F + L+AL  LE +GFD + ++SRI +L+ IK +  Q + +   ++ QI E
Sbjct: 1086 LRFDDPRSIFGSSLEALVELEMHGFDTKPVQSRINELVFIKDQQEQLKGRTKEVENQIME 1145

Query: 420  RNNENAQYNTMIAGLDKNIAYVEKTLAHLHEKRSSTIMLKKTNDSEIVNMEKDLQSTEEA 241
              +E  +       +D+ I  ++K +  L EKR+  +  K++ DSEI  +   + +  E+
Sbjct: 1146 HTHEKTK-------IDEEIYEIDKKMIELQEKRALAVSNKESKDSEIAALLSSVDAMNES 1198

Query: 240  FLSSEHDFHAALVAPW 193
              S+  DF     +PW
Sbjct: 1199 IQSARQDFERVATSPW 1214


>emb|CBI36980.3| unnamed protein product [Vitis vinifera]
          Length = 1074

 Score =  142 bits (359), Expect = 1e-31
 Identities = 76/196 (38%), Positives = 116/196 (59%)
 Frame = -2

Query: 780  TLPFEKNSAMWKPFESLEVFHMMPQQPHFRALEQYCEEFREGMAIGFMVTFANLINDLSK 601
            +LPF K+S +W   E+LEVF  MPQ+PHFR LE   EE REG+AIG MVTF+ LI  ++K
Sbjct: 886  SLPFVKSSPIWNTLETLEVFQRMPQKPHFRPLENCKEERREGLAIGNMVTFSTLIEKVAK 945

Query: 600  LRITDSTEVFLAKLKALPRLEANGFDVQCLRSRIEKLLKIKCELNQHEMKRASLDEQISE 421
            LR  D   +F + L+AL  LE +GFD + ++SRI +L+ IK +  Q + +   ++ QI E
Sbjct: 946  LRFDDPRSIFGSSLEALVELEMHGFDTKPVQSRINELVFIKDQQEQLKGRTKEVENQIME 1005

Query: 420  RNNENAQYNTMIAGLDKNIAYVEKTLAHLHEKRSSTIMLKKTNDSEIVNMEKDLQSTEEA 241
              +E  +       +D+ I  ++K +  L EKR+  +  K++ DSEI  +   + +  E+
Sbjct: 1006 HTHEKTK-------IDEEIYEIDKKMIELQEKRALAVSNKESKDSEIAALLSSVDAMNES 1058

Query: 240  FLSSEHDFHAALVAPW 193
              S+  DF     +PW
Sbjct: 1059 IQSARQDFERVATSPW 1074


>ref|XP_002515642.1| RNA binding protein, putative [Ricinus communis]
            gi|223545236|gb|EEF46744.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 689

 Score =  140 bits (354), Expect = 4e-31
 Identities = 74/197 (37%), Positives = 121/197 (61%), Gaps = 2/197 (1%)
 Frame = -2

Query: 777  LPFEKNSAMWKPFESLEVFHMMPQQPHFRALEQYCEEFREGMAIGFMVTFANLINDLSKL 598
            +PF K+S +WK  ESLEVF ++PQ+PHF  L  + E  REGMA+G M++FA LI  +SKL
Sbjct: 502  MPFLKSSLIWKNIESLEVFQVLPQKPHFSPLIGHKEASREGMAMGHMLSFAVLIEKMSKL 561

Query: 597  RITDSTEVFLAKLKALPRLEANGFDVQCLRSRIEKLLKIK--CELNQHEMKRASLDEQIS 424
            R+ D  EVF + ++ L  LE +GF+V+ +  R+EKLL IK  C+  + E K+  +   ++
Sbjct: 562  RVDDGREVFESYMEVLAELEMHGFEVKAIAERLEKLLSIKDRCKRLEDEAKKVHIG--MA 619

Query: 423  ERNNENAQYNTMIAGLDKNIAYVEKTLAHLHEKRSSTIMLKKTNDSEIVNMEKDLQSTEE 244
            E  NE  +       L+++I  +E+ ++ L E+R+  + +K   DSE++ ++ +  +  E
Sbjct: 620  EGKNEKIK-------LEEDIDKIEERISQLEEQRAMKVSMKMMKDSELITLQVNANAVNE 672

Query: 243  AFLSSEHDFHAALVAPW 193
              ++ EH+F     APW
Sbjct: 673  DIVNMEHEFENVAAAPW 689


>ref|XP_002515641.1| RNA binding protein, putative [Ricinus communis]
            gi|223545235|gb|EEF46743.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 683

 Score =  136 bits (343), Expect = 7e-30
 Identities = 73/197 (37%), Positives = 121/197 (61%), Gaps = 2/197 (1%)
 Frame = -2

Query: 777  LPFEKNSAMWKPFESLEVFHMMPQQPHFRALEQYCEEFREGMAIGFMVTFANLINDLSKL 598
            +PF K+S +WK  ESLEVF ++PQ+PHF  L ++ EE REGMA+G M++FA LI  +SKL
Sbjct: 496  MPFFKSSLIWKNIESLEVFQVLPQKPHFSPLIRHKEESREGMAMGHMLSFAVLIEKMSKL 555

Query: 597  RITDSTEVFLAKLKALPRLEANGFDVQCLRSRIEKLLKIK--CELNQHEMKRASLDEQIS 424
            ++ D  EVF + ++ L  LE +GF V+ +   +EKLL IK  C+  + E K+  +   ++
Sbjct: 556  QVDDGREVFDSYMEVLADLEMHGFQVEAIAECLEKLLSIKDRCKRLEDEAKKVHIG--MA 613

Query: 423  ERNNENAQYNTMIAGLDKNIAYVEKTLAHLHEKRSSTIMLKKTNDSEIVNMEKDLQSTEE 244
            E  +E  +       L+++I  +EK ++ L E+R+  + +K   DSE++ ++ +  +  E
Sbjct: 614  EGKHEKIK-------LEEDIDKIEKRISLLEEQRAMKVSMKMMKDSELITLQVNANAVNE 666

Query: 243  AFLSSEHDFHAALVAPW 193
              ++ EH+F     APW
Sbjct: 667  DIVNMEHEFENVATAPW 683


>emb|CAN64022.1| hypothetical protein VITISV_005264 [Vitis vinifera]
          Length = 1348

 Score =  136 bits (343), Expect = 7e-30
 Identities = 75/191 (39%), Positives = 113/191 (59%)
 Frame = -2

Query: 780  TLPFEKNSAMWKPFESLEVFHMMPQQPHFRALEQYCEEFREGMAIGFMVTFANLINDLSK 601
            +LPF K+S +W   E+LEVF  MPQ+PHFR LE   EE REG+AIG MVTF+ LI  ++K
Sbjct: 1008 SLPFVKSSPIWNTLETLEVFQRMPQKPHFRPLENCKEERREGLAIGNMVTFSTLIEKVAK 1067

Query: 600  LRITDSTEVFLAKLKALPRLEANGFDVQCLRSRIEKLLKIKCELNQHEMKRASLDEQISE 421
            LR  D   +F + L+AL  LE +GFD + ++SRI +L+ IK +  Q + +   ++ QI E
Sbjct: 1068 LRFDDPRSIFGSSLEALVELEMHGFDTKPVQSRINELVFIKDQQEQLKGRTKEVENQIME 1127

Query: 420  RNNENAQYNTMIAGLDKNIAYVEKTLAHLHEKRSSTIMLKKTNDSEIVNMEKDLQSTEEA 241
              +E  +       +D+ I  ++K +  L EKR+  +  K++ DSEI  +     +  E+
Sbjct: 1128 HTHEKTK-------IDEEIYEIDKKMIELQEKRALAVSNKESKDSEIAALLSSADAMNES 1180

Query: 240  FLSSEHDFHAA 208
              S+  DF  A
Sbjct: 1181 IQSARQDFERA 1191


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