BLASTX nr result

ID: Dioscorea21_contig00023975 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00023975
         (230 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA61109.1| RCD1 protein [Hordeum vulgare]                        101   6e-20
dbj|BAJ95231.1| predicted protein [Hordeum vulgare subsp. vulgar...   101   6e-20
gb|AEK94072.1| SRO1 [Thinopyrum ponticum x Triticum aestivum]         100   9e-20
ref|XP_003560570.1| PREDICTED: inactive poly [ADP-ribose] polyme...    97   1e-18
gb|EAZ29354.1| hypothetical protein OsJ_13421 [Oryza sativa Japo...    93   3e-17

>emb|CCA61109.1| RCD1 protein [Hordeum vulgare]
          Length = 579

 Score =  101 bits (252), Expect = 6e-20
 Identities = 42/76 (55%), Positives = 60/76 (78%)
 Frame = -3

Query: 228 IVGIFRTPLLDNSGQVRFKCFQEHVDLTKSRRGNANVRYAWLASSKDVVEDVMLKGVMQI 49
           I+GI+RTPL+D  G+ RF  FQ+ +++TK  RGNANVRYAWL  SKD +E++ML+GV+++
Sbjct: 271 IIGIYRTPLVDQQGRARFNLFQKELEVTKMHRGNANVRYAWLPCSKDAMEEMMLRGVLEV 330

Query: 48  KMPACGPIFGLGVHLA 1
             P  GP++G+G HLA
Sbjct: 331 TKPMLGPMYGIGTHLA 346


>dbj|BAJ95231.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326527769|dbj|BAJ88957.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 579

 Score =  101 bits (252), Expect = 6e-20
 Identities = 42/76 (55%), Positives = 60/76 (78%)
 Frame = -3

Query: 228 IVGIFRTPLLDNSGQVRFKCFQEHVDLTKSRRGNANVRYAWLASSKDVVEDVMLKGVMQI 49
           I+GI+RTPL+D  G+ RF  FQ+ +++TK  RGNANVRYAWL  SKD +E++ML+GV+++
Sbjct: 271 IIGIYRTPLVDQQGRARFNLFQKELEVTKMHRGNANVRYAWLPCSKDAMEEMMLRGVLEV 330

Query: 48  KMPACGPIFGLGVHLA 1
             P  GP++G+G HLA
Sbjct: 331 TKPMLGPMYGIGTHLA 346


>gb|AEK94072.1| SRO1 [Thinopyrum ponticum x Triticum aestivum]
          Length = 578

 Score =  100 bits (250), Expect = 9e-20
 Identities = 41/76 (53%), Positives = 59/76 (77%)
 Frame = -3

Query: 228 IVGIFRTPLLDNSGQVRFKCFQEHVDLTKSRRGNANVRYAWLASSKDVVEDVMLKGVMQI 49
           I+GI+RTPL+D  G+ RF  FQ+ ++ TK  RGNANVRYAWL  SKD +E++M++GV+++
Sbjct: 271 IIGIYRTPLVDQQGRARFNLFQKELEATKMHRGNANVRYAWLPCSKDTMEEMMMRGVLEV 330

Query: 48  KMPACGPIFGLGVHLA 1
             P  GP++G+G HLA
Sbjct: 331 TKPMLGPVYGIGTHLA 346


>ref|XP_003560570.1| PREDICTED: inactive poly [ADP-ribose] polymerase RCD1-like
           [Brachypodium distachyon]
          Length = 563

 Score = 97.4 bits (241), Expect = 1e-18
 Identities = 42/76 (55%), Positives = 57/76 (75%)
 Frame = -3

Query: 228 IVGIFRTPLLDNSGQVRFKCFQEHVDLTKSRRGNANVRYAWLASSKDVVEDVMLKGVMQI 49
           IVGI+RTPL+D   Q RF  FQ+ V++TK +RGNANVRYAWL  S+D ++++M+ G +QI
Sbjct: 267 IVGIYRTPLVDQQRQARFNLFQKEVEVTKKQRGNANVRYAWLPCSRDAMDEMMMHGTLQI 326

Query: 48  KMPACGPIFGLGVHLA 1
             P  GP +G+G HLA
Sbjct: 327 TKPLLGPTYGIGTHLA 342


>gb|EAZ29354.1| hypothetical protein OsJ_13421 [Oryza sativa Japonica Group]
          Length = 590

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 39/76 (51%), Positives = 58/76 (76%)
 Frame = -3

Query: 228 IVGIFRTPLLDNSGQVRFKCFQEHVDLTKSRRGNANVRYAWLASSKDVVEDVMLKGVMQI 49
           I+GI+RTP+LD  G+ R+  FQ+ V +TK++RGNAN RYAWLA +K  +E++M+ G ++I
Sbjct: 284 IIGIYRTPMLDQLGRSRYSLFQKEVQVTKNQRGNANERYAWLACTKGTMEEMMMNGALEI 343

Query: 48  KMPACGPIFGLGVHLA 1
             P  GP++G+G HLA
Sbjct: 344 AKPLQGPMYGVGAHLA 359


Top