BLASTX nr result

ID: Dioscorea21_contig00023942 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00023942
         (774 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001054075.1| Os04g0648500 [Oryza sativa Japonica Group] g...   323   2e-86
tpg|DAA35704.1| TPA: putative RING zinc finger domain superfamil...   323   3e-86
ref|XP_003579389.1| PREDICTED: BRCA1-associated protein-like [Br...   318   6e-85
dbj|BAK05063.1| predicted protein [Hordeum vulgare subsp. vulgare]    314   1e-83
emb|CAN74457.1| hypothetical protein VITISV_012708 [Vitis vinifera]   295   7e-78

>ref|NP_001054075.1| Os04g0648500 [Oryza sativa Japonica Group]
           gi|38345493|emb|CAD41704.2| OSJNBa0010D21.6 [Oryza
           sativa Japonica Group] gi|113565646|dbj|BAF15989.1|
           Os04g0648500 [Oryza sativa Japonica Group]
           gi|215701323|dbj|BAG92747.1| unnamed protein product
           [Oryza sativa Japonica Group]
           gi|222629669|gb|EEE61801.1| hypothetical protein
           OsJ_16414 [Oryza sativa Japonica Group]
          Length = 544

 Score =  323 bits (829), Expect = 2e-86
 Identities = 152/262 (58%), Positives = 192/262 (73%), Gaps = 7/262 (2%)
 Frame = -1

Query: 768 RSTLLFALAVPTRVSIDDFLRFCHPY-SPACEILIIRNDAVEDLYSVVVRFDEQESADRF 592
           R T L  LAVPT VS DDF+RFC PY   A +I ++R+D VED YSV+V F++Q+SAD F
Sbjct: 123 RGTRLLVLAVPTHVSPDDFVRFCGPYIEHASDIHVVRDDGVEDRYSVLVEFEDQKSADGF 182

Query: 591 YCDLNGWRLSDTEPEVCHILFLDFVEFTEYTEIASTPPIGFTELPICPACLEKLDQDISG 412
           Y DLNGWR S +E EVCH+LF+  V++T  T+ A TPP+G TELP CP C+E+LDQDISG
Sbjct: 183 YLDLNGWRFSSSEVEVCHVLFIVAVQYTPSTKPAVTPPVGSTELPTCPVCIERLDQDISG 242

Query: 411 IVATTFDQFFPST--SKWFNSSCPVCQFLQEHTQKATCSTCHTSEHLWICLICGFVGCGR 238
           I+ATT D  F  +  S W NSSCPVCQF Q+ ++  TCS C TS +LWIC+ICGFVGCGR
Sbjct: 243 IMATTCDHSFQCSCVSMWVNSSCPVCQFCQKQSKNPTCSVCQTSGNLWICIICGFVGCGR 302

Query: 237 YKEGHARDHWGDTHHCYALDPHAQRIWDYVGDTYVHRLNQSRSD---DKFQSHCRFSIDN 67
           Y+EGHA  HW +T HCY+LD   QR+WDYVGD+YVHRLN S+SD    KF+S C++S D 
Sbjct: 303 YEEGHAIRHWKETQHCYSLDLETQRVWDYVGDSYVHRLNHSKSDVKHSKFKSKCKYSGDK 362

Query: 66  CAS-ECSDDSCFSRVLYVSQVE 4
           CA+  C+D+      ++ S+ E
Sbjct: 363 CANCSCNDEEDIGGAIFSSKAE 384


>tpg|DAA35704.1| TPA: putative RING zinc finger domain superfamily protein [Zea
           mays]
          Length = 537

 Score =  323 bits (827), Expect = 3e-86
 Identities = 151/262 (57%), Positives = 195/262 (74%), Gaps = 7/262 (2%)
 Frame = -1

Query: 768 RSTLLFALAVPTRVSIDDFLRFCHPYSP-ACEILIIRNDAVEDLYSVVVRFDEQESADRF 592
           R T L  LAVPTRVS +DF+RFC P+   A +I  IR+D VED YSV+V F++Q SA+ F
Sbjct: 120 RGTRLLVLAVPTRVSPEDFVRFCGPHLECAADIRFIRDDGVEDRYSVLVEFEDQSSAEWF 179

Query: 591 YCDLNGWRLSDTEPEVCHILFLDFVEFTEYTEIASTPPIGFTELPICPACLEKLDQDISG 412
           Y DLNGWR S +E EVCH+LF+  V++T  +E+A+TPP G TELP+CP C+E+LDQDISG
Sbjct: 180 YADLNGWRFSTSESEVCHVLFIAAVQYTPSSEVATTPPAGSTELPMCPVCIERLDQDISG 239

Query: 411 IVATTFDQFFPST--SKWFNSSCPVCQFLQEHTQKATCSTCHTSEHLWICLICGFVGCGR 238
           I+ATT D  F  +  S W NSSCPVCQF Q+ ++ +TCS C T+ +LWIC+ICGFVGCGR
Sbjct: 240 ILATTCDHSFRCSCVSVWTNSSCPVCQFCQKQSENSTCSVCQTTGNLWICVICGFVGCGR 299

Query: 237 YKEGHARDHWGDTHHCYALDPHAQRIWDYVGDTYVHRLNQSRSD---DKFQSHCRFSIDN 67
           Y+EGHA+ HW DT HCY+LD   QR+WDYVGD++VHRLNQS+SD    KF+S  ++S D 
Sbjct: 300 YQEGHAKQHWKDTQHCYSLDLETQRVWDYVGDSFVHRLNQSKSDAKHAKFKSKSKYSGDE 359

Query: 66  CAS-ECSDDSCFSRVLYVSQVE 4
           C +  C+DDS     ++ S+ E
Sbjct: 360 CVNCSCNDDSDMGGAMFSSKAE 381


>ref|XP_003579389.1| PREDICTED: BRCA1-associated protein-like [Brachypodium distachyon]
          Length = 594

 Score =  318 bits (816), Expect = 6e-85
 Identities = 156/267 (58%), Positives = 190/267 (71%), Gaps = 10/267 (3%)
 Frame = -1

Query: 774 SQRSTLLFALAVPTRVSIDDFLRFCHPY-SPACEILIIRNDAVEDLYSVVVRFDEQESAD 598
           S R T L  LAVPTRVS DDF+RFC PY   A +I +I +D VED YSV+V F++Q+SAD
Sbjct: 170 SWRGTRLLVLAVPTRVSSDDFVRFCGPYVEHASDIRVISDDGVEDRYSVLVEFEDQKSAD 229

Query: 597 RFYCDLNGWRLSDTEPEVCHILFLDFVEFTEYTEIASTPPIGFTELPICPACLEKLDQDI 418
            FY DLNGWR S +E EVCH+LF+  V++T   EIA  PP+G TELP CP C+E+LDQDI
Sbjct: 230 GFYLDLNGWRFSSSEVEVCHVLFIVAVQYTSSAEIAVIPPVGSTELPTCPVCIERLDQDI 289

Query: 417 SGIVATTFDQFFPST--SKWFNSSCPVCQFLQEHTQKAT---CSTCHTSEHLWICLICGF 253
           SGIVAT  D  F  +  S W +SSCPVCQF Q+ ++  T   CS C TSE+LWIC+ICGF
Sbjct: 290 SGIVATNCDHSFQCSCVSMWVSSSCPVCQFCQKLSETPTDPTCSVCQTSENLWICVICGF 349

Query: 252 VGCGRYKEGHARDHWGDTHHCYALDPHAQRIWDYVGDTYVHRLNQSRSD---DKFQSHCR 82
           VGCGRYKEGHA  HW  T HCY+LD   QR+WDYVGD+YVHRLN S+SD    KF+S C 
Sbjct: 350 VGCGRYKEGHAIRHWKGTQHCYSLDLETQRVWDYVGDSYVHRLNHSKSDVKHAKFKSKCE 409

Query: 81  FSIDNCAS-ECSDDSCFSRVLYVSQVE 4
           +S DNC +  C+D S     ++ S+ E
Sbjct: 410 YSGDNCVNCSCNDHSDMGGAIFSSKTE 436


>dbj|BAK05063.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 548

 Score =  314 bits (805), Expect = 1e-83
 Identities = 153/266 (57%), Positives = 187/266 (70%), Gaps = 9/266 (3%)
 Frame = -1

Query: 774 SQRSTLLFALAVPTRVSIDDFLRFCHPY-SPACEILIIRNDAVEDLYSVVVRFDEQESAD 598
           S R T L  LAVPTRV+ DDF+RFC PY   A EI +I +D VED YSV+V FD+Q+SAD
Sbjct: 125 SWRGTRLLVLAVPTRVTPDDFVRFCGPYVEHASEIRVISDDGVEDRYSVLVEFDDQKSAD 184

Query: 597 RFYCDLNGWRLSDTEPEVCHILFLDFVEFTEYTEIASTPPIGFTELPICPACLEKLDQDI 418
            FY DLNGWR S +E EVCH+LF+  V++T  TE+   PP+G TELP CP C+E+LDQDI
Sbjct: 185 GFYLDLNGWRFSSSEVEVCHVLFIVAVQYTSSTELDLIPPVGSTELPTCPVCIERLDQDI 244

Query: 417 SGIVATTFDQFFPST--SKWFNSSCPVCQFLQEHTQ---KATCSTCHTSEHLWICLICGF 253
           SGI AT  D  F  +  S W +SSCPVCQF Q+ ++     TCS C TSE+LWIC+ICGF
Sbjct: 245 SGIGATNCDHSFQCSCVSMWVSSSCPVCQFCQKLSEAPTNPTCSVCQTSENLWICVICGF 304

Query: 252 VGCGRYKEGHARDHWGDTHHCYALDPHAQRIWDYVGDTYVHRLNQSRSD---DKFQSHCR 82
           VGCGRYKEGH+  HW  T HCY+LD   QR+WDYVGD+YVHRLN S+SD    KF S C 
Sbjct: 305 VGCGRYKEGHSIRHWKGTQHCYSLDLETQRVWDYVGDSYVHRLNHSKSDVKHAKFSSKCE 364

Query: 81  FSIDNCASECSDDSCFSRVLYVSQVE 4
           +  DNC +   DDS    V++ S+ +
Sbjct: 365 YPGDNCVNCMHDDSDMGGVMFSSKAD 390


>emb|CAN74457.1| hypothetical protein VITISV_012708 [Vitis vinifera]
          Length = 438

 Score =  295 bits (755), Expect = 7e-78
 Identities = 146/265 (55%), Positives = 180/265 (67%), Gaps = 7/265 (2%)
 Frame = -1

Query: 774 SQRSTLLFALAVPTRVSIDDFLRFCHPY-SPACEILIIRNDAVEDLYSVVVRFDEQESAD 598
           + R+TLLF +AVP  +S DDF+RFC  +     E+L+IRNDAVED YSVV++F  Q  AD
Sbjct: 48  TSRTTLLFVVAVPNYLSSDDFIRFCGSHIDEVSELLVIRNDAVEDRYSVVIKFMNQLYAD 107

Query: 597 RFYCDLNGWRLSDTEPEVCHILFLDFVEFTEYTEIASTPPIGFTELPICPACLEKLDQDI 418
            FYC  NG R S  E EVCH+LF+   E+TE  + A TPP GFTELP CP CLE+LDQD 
Sbjct: 108 AFYCIFNGKRFSPGEAEVCHLLFMLSAEYTESADFACTPPSGFTELPTCPVCLERLDQDT 167

Query: 417 SGIVATTFDQFF--PSTSKWFNSSCPVCQFLQEHTQKATCSTCHTSEHLWICLICGFVGC 244
           SGI+ T  D  F  P  SK  N SC VCQF Q+  +K TC  C TSE+LW+C+ICGF GC
Sbjct: 168 SGILNTLCDHSFQCPCISKRTNLSCQVCQFCQQQDEKPTCFVCGTSENLWVCMICGFAGC 227

Query: 243 GRYKEGHARDHWGDTHHCYALDPHAQRIWDYVGDTYVHRLNQSRSDDK---FQSHCRFSI 73
           GRYKEGHA  HW D  H Y+LD   Q++WDYVGD++VHRLNQS++D K     S C  + 
Sbjct: 228 GRYKEGHAIRHWKDAQHSYSLDLEKQQVWDYVGDSFVHRLNQSKADGKLAMMDSRCMSTE 287

Query: 72  DNCAS-ECSDDSCFSRVLYVSQVEA 1
            +C +  C+DDS  S  L+ S+VEA
Sbjct: 288 GDCGTYGCTDDSGISAALFSSKVEA 312


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