BLASTX nr result

ID: Dioscorea21_contig00023927 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00023927
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea m...   122   4e-26
dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protei...   121   5e-26
gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japo...   121   5e-26
gb|EAZ04528.1| hypothetical protein OsI_26678 [Oryza sativa Indi...   121   5e-26
ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containi...   119   2e-25

>tpg|DAA63384.1| TPA: hypothetical protein ZEAMMB73_689576 [Zea mays]
          Length = 802

 Score =  122 bits (305), Expect = 4e-26
 Identities = 56/92 (60%), Positives = 69/92 (75%)
 Frame = +3

Query: 3   RQIFNRIQKKDHVSWNAILTGYLNSRRIQDAVGIFNPMPSKNCLAWMVMISGFVHNGLAE 182
           R+IF+ +  KD VSWN IL+GY+ S  +  AV +F  MP KN L+WMVM+SG+VH G AE
Sbjct: 353 RRIFDNMTLKDVVSWNTILSGYVESSCLDKAVEVFEEMPYKNELSWMVMVSGYVHGGFAE 412

Query: 183 EGLKLFNQMRNEGFIPCDYTYAGTFAACGELG 278
           + LKLFN+MR+E   PCDYTYAG  AACGELG
Sbjct: 413 DALKLFNKMRSENVKPCDYTYAGAIAACGELG 444



 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 27/92 (29%), Positives = 50/92 (54%)
 Frame = +3

Query: 3   RQIFNRIQKKDHVSWNAILTGYLNSRRIQDAVGIFNPMPSKNCLAWMVMISGFVHNGLAE 182
           R++ + +  KD ++W  ++ GY+    +  A  +F  +  K  + W  MISG+VH+G+A 
Sbjct: 217 RKVLDEMPNKDDLTWTTMVVGYVRRGDVGAARSVFEEVDGKFDVVWNAMISGYVHSGMAV 276

Query: 183 EGLKLFNQMRNEGFIPCDYTYAGTFAACGELG 278
           E  +LF +M  E     ++T+    +AC  +G
Sbjct: 277 EAFELFRRMVLERVPLDEFTFTSVLSACANVG 308


>dbj|BAC83258.1| pentatricopeptide (PPR) repeat-containing protein-like protein
           [Oryza sativa Japonica Group]
           gi|50509373|dbj|BAD30928.1| pentatricopeptide (PPR)
           repeat-containing protein-like protein [Oryza sativa
           Japonica Group]
          Length = 808

 Score =  121 bits (304), Expect = 5e-26
 Identities = 56/92 (60%), Positives = 70/92 (76%)
 Frame = +3

Query: 3   RQIFNRIQKKDHVSWNAILTGYLNSRRIQDAVGIFNPMPSKNCLAWMVMISGFVHNGLAE 182
           ++IF+ +  KD VSWN IL+GY++S  +  AV +F  MP KN L+WMVM+SG+VH GL+E
Sbjct: 359 KRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSE 418

Query: 183 EGLKLFNQMRNEGFIPCDYTYAGTFAACGELG 278
           + LKLFNQMR E   PCDYTYAG  AACGELG
Sbjct: 419 DALKLFNQMRAEDVKPCDYTYAGAIAACGELG 450



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 24/92 (26%), Positives = 48/92 (52%)
 Frame = +3

Query: 3   RQIFNRIQKKDHVSWNAILTGYLNSRRIQDAVGIFNPMPSKNCLAWMVMISGFVHNGLAE 182
           R++ + +  KD ++W  ++ GY+    +  A  +F  +  K  + W  MISG+V +G+  
Sbjct: 223 RKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCA 282

Query: 183 EGLKLFNQMRNEGFIPCDYTYAGTFAACGELG 278
           +  +LF +M +E     ++T+    +AC   G
Sbjct: 283 DAFELFRRMVSEKVPLDEFTFTSVLSACANAG 314


>gb|EEE67500.1| hypothetical protein OsJ_24934 [Oryza sativa Japonica Group]
          Length = 830

 Score =  121 bits (304), Expect = 5e-26
 Identities = 56/92 (60%), Positives = 70/92 (76%)
 Frame = +3

Query: 3   RQIFNRIQKKDHVSWNAILTGYLNSRRIQDAVGIFNPMPSKNCLAWMVMISGFVHNGLAE 182
           ++IF+ +  KD VSWN IL+GY++S  +  AV +F  MP KN L+WMVM+SG+VH GL+E
Sbjct: 357 KRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSE 416

Query: 183 EGLKLFNQMRNEGFIPCDYTYAGTFAACGELG 278
           + LKLFNQMR E   PCDYTYAG  AACGELG
Sbjct: 417 DALKLFNQMRAEDVKPCDYTYAGAIAACGELG 448



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 24/92 (26%), Positives = 48/92 (52%)
 Frame = +3

Query: 3   RQIFNRIQKKDHVSWNAILTGYLNSRRIQDAVGIFNPMPSKNCLAWMVMISGFVHNGLAE 182
           R++ + +  KD ++W  ++ GY+    +  A  +F  +  K  + W  MISG+V +G+  
Sbjct: 221 RKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCA 280

Query: 183 EGLKLFNQMRNEGFIPCDYTYAGTFAACGELG 278
           +  +LF +M +E     ++T+    +AC   G
Sbjct: 281 DAFELFRRMVSEKVPLDEFTFTSVLSACANAG 312


>gb|EAZ04528.1| hypothetical protein OsI_26678 [Oryza sativa Indica Group]
          Length = 585

 Score =  121 bits (304), Expect = 5e-26
 Identities = 56/92 (60%), Positives = 70/92 (76%)
 Frame = +3

Query: 3   RQIFNRIQKKDHVSWNAILTGYLNSRRIQDAVGIFNPMPSKNCLAWMVMISGFVHNGLAE 182
           ++IF+ +  KD VSWN IL+GY++S  +  AV +F  MP KN L+WMVM+SG+VH GL+E
Sbjct: 359 KRIFDTMNLKDVVSWNTILSGYIDSGCLDKAVEVFKVMPYKNDLSWMVMVSGYVHGGLSE 418

Query: 183 EGLKLFNQMRNEGFIPCDYTYAGTFAACGELG 278
           + LKLFNQMR E   PCDYTYAG  AACGELG
Sbjct: 419 DALKLFNQMRAEDVKPCDYTYAGAIAACGELG 450



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 24/92 (26%), Positives = 48/92 (52%)
 Frame = +3

Query: 3   RQIFNRIQKKDHVSWNAILTGYLNSRRIQDAVGIFNPMPSKNCLAWMVMISGFVHNGLAE 182
           R++ + +  KD ++W  ++ GY+    +  A  +F  +  K  + W  MISG+V +G+  
Sbjct: 223 RKVLDEMPDKDDLTWTTMVVGYVRRGDVNAARSVFEEVDGKFDVVWNAMISGYVQSGMCA 282

Query: 183 EGLKLFNQMRNEGFIPCDYTYAGTFAACGELG 278
           +  +LF +M +E     ++T+    +AC   G
Sbjct: 283 DAFELFRRMVSEKVPLDEFTFTSVLSACANAG 314


>ref|XP_003560023.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g25360-like [Brachypodium distachyon]
          Length = 804

 Score =  119 bits (299), Expect = 2e-25
 Identities = 56/91 (61%), Positives = 69/91 (75%)
 Frame = +3

Query: 6   QIFNRIQKKDHVSWNAILTGYLNSRRIQDAVGIFNPMPSKNCLAWMVMISGFVHNGLAEE 185
           +IF+ +  KD VSWN IL+GY+ S  + +A  IF  MP K+ L+WMVM+SG+VH GLAE+
Sbjct: 356 KIFDSMTLKDVVSWNTILSGYIESGCLDNAARIFKEMPYKSELSWMVMVSGYVHGGLAED 415

Query: 186 GLKLFNQMRNEGFIPCDYTYAGTFAACGELG 278
            LKLFNQMR+E   PCDYTYAG  AACGELG
Sbjct: 416 ALKLFNQMRSEDVKPCDYTYAGAVAACGELG 446



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 24/92 (26%), Positives = 49/92 (53%)
 Frame = +3

Query: 3   RQIFNRIQKKDHVSWNAILTGYLNSRRIQDAVGIFNPMPSKNCLAWMVMISGFVHNGLAE 182
           R++ + + +KD ++W  I+ G++    +  A   F  +  +  + W  MISG+V +G+  
Sbjct: 219 RKVLDEMPEKDELTWTTIVVGHVRKGDVHAARSAFEEIDGEFDVVWNAMISGYVQSGMCA 278

Query: 183 EGLKLFNQMRNEGFIPCDYTYAGTFAACGELG 278
           E  +LF +M ++   P ++T+    +AC   G
Sbjct: 279 EAFELFRRMVSKRIPPDEFTFTSLLSACANAG 310


Top