BLASTX nr result

ID: Dioscorea21_contig00023849 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00023849
         (571 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK22522.1| unknown [Picea sitchensis]                              64   2e-08
gb|AFK33921.1| unknown [Lotus japonicus]                               58   1e-06
ref|XP_002326061.1| predicted protein [Populus trichocarpa] gi|2...    58   1e-06
gb|ACJ83961.1| unknown [Medicago truncatula]                           58   1e-06
gb|ABK95712.1| unknown [Populus trichocarpa]                           58   1e-06

>gb|ABK22522.1| unknown [Picea sitchensis]
          Length = 162

 Score = 63.9 bits (154), Expect = 2e-08
 Identities = 28/35 (80%), Positives = 31/35 (88%)
 Frame = +2

Query: 2   FGPYKISGSEVFFRTELSFAFVNLRPVVPGHILLC 106
           FGPYKI  +EVFF TELSFA VNLRPVVPGH+L+C
Sbjct: 14  FGPYKIEKNEVFFTTELSFALVNLRPVVPGHVLVC 48


>gb|AFK33921.1| unknown [Lotus japonicus]
          Length = 157

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 24/35 (68%), Positives = 30/35 (85%)
 Frame = +2

Query: 2   FGPYKISGSEVFFRTELSFAFVNLRPVVPGHILLC 106
           FGPYKI  SEVF+ T LS+A VNLRP++PGH+L+C
Sbjct: 8   FGPYKIHQSEVFYSTPLSYAMVNLRPLLPGHVLIC 42


>ref|XP_002326061.1| predicted protein [Populus trichocarpa] gi|222862936|gb|EEF00443.1|
           predicted protein [Populus trichocarpa]
          Length = 209

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 24/37 (64%), Positives = 30/37 (81%)
 Frame = +2

Query: 2   FGPYKISGSEVFFRTELSFAFVNLRPVVPGHILLCGR 112
           FGPYKI   EVF+ T LS+A VNLRP++PGH+L+C R
Sbjct: 60  FGPYKIDPKEVFYATHLSYAMVNLRPLLPGHVLVCPR 96


>gb|ACJ83961.1| unknown [Medicago truncatula]
          Length = 192

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 23/35 (65%), Positives = 31/35 (88%)
 Frame = +2

Query: 2   FGPYKISGSEVFFRTELSFAFVNLRPVVPGHILLC 106
           FGPYKI  +EVF+ T+LS+A VNLRP++PGH+L+C
Sbjct: 43  FGPYKIHHNEVFYSTDLSYAMVNLRPLLPGHVLIC 77


>gb|ABK95712.1| unknown [Populus trichocarpa]
          Length = 159

 Score = 58.2 bits (139), Expect = 1e-06
 Identities = 24/37 (64%), Positives = 30/37 (81%)
 Frame = +2

Query: 2   FGPYKISGSEVFFRTELSFAFVNLRPVVPGHILLCGR 112
           FGPYKI   EVF+ T LS+A VNLRP++PGH+L+C R
Sbjct: 10  FGPYKIDPKEVFYATHLSYAMVNLRPLLPGHVLVCPR 46


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