BLASTX nr result

ID: Dioscorea21_contig00023811 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00023811
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN63149.1| hypothetical protein VITISV_040802 [Vitis vinifera]    98   6e-19
gb|ABF72010.1| hypothetical protein MA4_111B14.64 [Musa acuminata]     96   2e-18
ref|XP_002277620.1| PREDICTED: uncharacterized protein LOC100253...    94   2e-17
ref|XP_002509508.1| conserved hypothetical protein [Ricinus comm...    93   3e-17
emb|CBI27661.3| unnamed protein product [Vitis vinifera]               92   3e-17

>emb|CAN63149.1| hypothetical protein VITISV_040802 [Vitis vinifera]
          Length = 272

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 46/65 (70%), Positives = 52/65 (80%), Gaps = 3/65 (4%)
 Frame = +3

Query: 3   VMARSRTRPGDTHVFLHDVDRKVEKTFAMEFLCKKYLVGGTGRIWHFKIPPANNYSSA-- 176
           VMAR+R RPG THVFLHDVDR+VEK +A EFLC+KYLVG  GR+WHF+IPPA N S A  
Sbjct: 208 VMARARVRPGVTHVFLHDVDRRVEKVYAEEFLCRKYLVGSVGRLWHFEIPPAANLSRASD 267

Query: 177 -TQFC 188
            T FC
Sbjct: 268 STGFC 272


>gb|ABF72010.1| hypothetical protein MA4_111B14.64 [Musa acuminata]
          Length = 278

 Score = 96.3 bits (238), Expect = 2e-18
 Identities = 45/64 (70%), Positives = 53/64 (82%), Gaps = 2/64 (3%)
 Frame = +3

Query: 3   VMARSRTRPGDTHVFLHDVDRKVEKTFAMEFLCKKYLVGGTGRIWHFKIPPANNYS--SA 176
           VMAR R   G+T VFLHDVDR+VEK++AMEFLC+KY VGGTGR+WHFKIPPAN+ S  +A
Sbjct: 215 VMARGRRGEGETDVFLHDVDRRVEKSYAMEFLCEKYRVGGTGRLWHFKIPPANDTSAIAA 274

Query: 177 TQFC 188
             FC
Sbjct: 275 DTFC 278


>ref|XP_002277620.1| PREDICTED: uncharacterized protein LOC100253955 [Vitis vinifera]
          Length = 282

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 44/65 (67%), Positives = 50/65 (76%), Gaps = 3/65 (4%)
 Frame = +3

Query: 3   VMARSRTRPGDTHVFLHDVDRKVEKTFAMEFLCKKYLVGGTGRIWHFKIPPANNYSSA-- 176
           VMAR+R RPG THVFLHDVDR+VEK +A E LC+KY VG  GR+WHF+IPPA N S A  
Sbjct: 218 VMARARVRPGVTHVFLHDVDRRVEKVYAEELLCRKYQVGSVGRLWHFEIPPAANLSRASD 277

Query: 177 -TQFC 188
            T FC
Sbjct: 278 STGFC 282


>ref|XP_002509508.1| conserved hypothetical protein [Ricinus communis]
           gi|223549407|gb|EEF50895.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 298

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 43/65 (66%), Positives = 51/65 (78%), Gaps = 3/65 (4%)
 Frame = +3

Query: 3   VMARSRTRPGDTHVFLHDVDRKVEKTFAMEFLCKKYLVGGTGRIWHFKIPPANNYSSA-- 176
           VM+R+RTRPG THVFLHDVDR+VEK +AMEFLCKKYLV G  R+WHF+IP   N + +  
Sbjct: 234 VMSRARTRPGVTHVFLHDVDRRVEKLYAMEFLCKKYLVKGVSRLWHFEIPSLANRNDSDP 293

Query: 177 -TQFC 188
            T FC
Sbjct: 294 FTSFC 298


>emb|CBI27661.3| unnamed protein product [Vitis vinifera]
          Length = 312

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 41/59 (69%), Positives = 48/59 (81%)
 Frame = +3

Query: 3   VMARSRTRPGDTHVFLHDVDRKVEKTFAMEFLCKKYLVGGTGRIWHFKIPPANNYSSAT 179
           VMAR+R RPG THVFLHDVDR+VEK +A E LC+KY VG  GR+WHF+IPPA N S A+
Sbjct: 217 VMARARVRPGVTHVFLHDVDRRVEKVYAEELLCRKYQVGSVGRLWHFEIPPAANLSRAS 275


Top