BLASTX nr result

ID: Dioscorea21_contig00023780 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00023780
         (353 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ADK56113.1| stay-green protein [Neosinocalamus affinis]             65   4e-09
ref|XP_002872632.1| hypothetical protein ARALYDRAFT_352273 [Arab...    62   6e-08
gb|AAW82961.1| senescence-inducible chloroplast stay-green prote...    61   8e-08
ref|NP_001063758.1| Os09g0532000 [Oryza sativa Japonica Group] g...    61   1e-07
ref|XP_002509680.1| conserved hypothetical protein [Ricinus comm...    61   1e-07

>gb|ADK56113.1| stay-green protein [Neosinocalamus affinis]
          Length = 266

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 27/58 (46%), Positives = 35/58 (60%)
 Frame = +3

Query: 3   WIHFHSNIPEFDRVECWGTLREAATAGRVEPNHNFSSESYSFSVWKRWCDGECCCCFP 176
           W++FHSN+P F+RVECWG LR+AA     E +   + E      W + C G C CCFP
Sbjct: 185 WVYFHSNLPRFNRVECWGPLRDAAAP--AEDDAAAAEEQMPAGEWPQRCPGHCDCCFP 240


>ref|XP_002872632.1| hypothetical protein ARALYDRAFT_352273 [Arabidopsis lyrata subsp.
           lyrata] gi|297318469|gb|EFH48891.1| hypothetical protein
           ARALYDRAFT_352273 [Arabidopsis lyrata subsp. lyrata]
          Length = 466

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 27/58 (46%), Positives = 38/58 (65%)
 Frame = +3

Query: 3   WIHFHSNIPEFDRVECWGTLREAATAGRVEPNHNFSSESYSFSVWKRWCDGECCCCFP 176
           W++FHSNIPE+++VECWG L EA +  + + N N      S ++ +  C GEC CCFP
Sbjct: 182 WVYFHSNIPEYNKVECWGPLWEATSQHQHDGNRN---RKKSENLPELPCPGECKCCFP 236



 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 26/63 (41%), Positives = 37/63 (58%)
 Frame = +3

Query: 3   WIHFHSNIPEFDRVECWGTLREAATAGRVEPNHNFSSESYSFSVWKRWCDGECCCCFPRS 182
           W++FHSNIPEF++VECWGTL EA        +H+        ++ +  C  +C CCFP  
Sbjct: 376 WVYFHSNIPEFNKVECWGTLCEAT-------SHDGCKSHPCETLPEPPCLDKCSCCFPTV 428

Query: 183 QSI 191
            +I
Sbjct: 429 STI 431


>gb|AAW82961.1| senescence-inducible chloroplast stay-green protein, partial
           [Zoysia japonica]
          Length = 187

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 26/58 (44%), Positives = 34/58 (58%)
 Frame = +3

Query: 3   WIHFHSNIPEFDRVECWGTLREAATAGRVEPNHNFSSESYSFSVWKRWCDGECCCCFP 176
           W++FHSN+P F+RVECWG L +AA    VE     + +      W R C  +C CCFP
Sbjct: 106 WVYFHSNLPRFNRVECWGPLCDAAAP--VEEEGQQNDDRLPAGEWPRRCPQQCECCFP 161


>ref|NP_001063758.1| Os09g0532000 [Oryza sativa Japonica Group]
           gi|52075939|dbj|BAD46019.1| unknown protein [Oryza
           sativa Japonica Group] gi|52077222|dbj|BAD46266.1|
           unknown protein [Oryza sativa Japonica Group]
           gi|58866281|gb|AAW82954.1| senescence-inducible
           chloroplast stay-green protein [Oryza sativa Japonica
           Group] gi|113631991|dbj|BAF25672.1| Os09g0532000 [Oryza
           sativa Japonica Group] gi|215740722|dbj|BAG97378.1|
           unnamed protein product [Oryza sativa Japonica Group]
          Length = 274

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 25/65 (38%), Positives = 34/65 (52%), Gaps = 7/65 (10%)
 Frame = +3

Query: 3   WIHFHSNIPEFDRVECWGTLREAA-------TAGRVEPNHNFSSESYSFSVWKRWCDGEC 161
           W++FHSN+P F+RVECWG LR+A                   + +  +   W R C G+C
Sbjct: 188 WVYFHSNLPRFNRVECWGPLRDAGAPPEEDDAVAAAAAEEAAAEQMPAAGEWPRRCPGQC 247

Query: 162 CCCFP 176
            CCFP
Sbjct: 248 DCCFP 252


>ref|XP_002509680.1| conserved hypothetical protein [Ricinus communis]
           gi|223549579|gb|EEF51067.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 273

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 30/67 (44%), Positives = 38/67 (56%), Gaps = 4/67 (5%)
 Frame = +3

Query: 3   WIHFHSNIPEFDRVECWGTLREAA--TAGRVEPNHNFSSESYSFSVW--KRWCDGECCCC 170
           W++FHSNIPEF+RVECWG L+EAA  ++G     H  +      S W     C   C CC
Sbjct: 180 WVYFHSNIPEFNRVECWGPLKEAAAPSSGVYGLPHESNQRETPASNWDLPEPCQENCECC 239

Query: 171 FPRSQSI 191
           FP   +I
Sbjct: 240 FPPMSAI 246


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