BLASTX nr result

ID: Dioscorea21_contig00023744 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00023744
         (267 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004143583.1| PREDICTED: pentatricopeptide repeat-containi...   117   7e-25
emb|CBI36352.3| unnamed protein product [Vitis vinifera]              114   1e-23
ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat...   114   1e-23
emb|CBI39619.3| unnamed protein product [Vitis vinifera]              112   2e-23
ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containi...   112   2e-23

>ref|XP_004143583.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
           gi|449504924|ref|XP_004162332.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 595

 Score =  117 bits (294), Expect = 7e-25
 Identities = 50/69 (72%), Positives = 60/69 (86%)
 Frame = +3

Query: 3   HSEKLAIAFGMISLNPNAAIRVVKNLRVCLDCHTVAKLISRLYKREVILRDRHVFHYFRD 182
           HSEKLAIAFG+I+  P   IRV+KNLR+C DCHTVAKL+S++Y RE+I+RDR  FH+FRD
Sbjct: 527 HSEKLAIAFGLINTKPGTTIRVIKNLRICRDCHTVAKLVSQIYSREIIMRDRVRFHHFRD 586

Query: 183 GSCSCKDYW 209
           GSCSCKDYW
Sbjct: 587 GSCSCKDYW 595


>emb|CBI36352.3| unnamed protein product [Vitis vinifera]
          Length = 605

 Score =  114 bits (284), Expect = 1e-23
 Identities = 50/69 (72%), Positives = 59/69 (85%)
 Frame = +3

Query: 3   HSEKLAIAFGMISLNPNAAIRVVKNLRVCLDCHTVAKLISRLYKREVILRDRHVFHYFRD 182
           HSEKLAIAFG+IS  P   IR+VKNLR+C+DCH VAKL+S++Y REVI+RDR  FH+FR 
Sbjct: 537 HSEKLAIAFGLISSGPGVTIRIVKNLRMCVDCHYVAKLVSKVYNREVIVRDRTRFHHFRH 596

Query: 183 GSCSCKDYW 209
           GSCSCKDYW
Sbjct: 597 GSCSCKDYW 605


>ref|XP_002264123.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g15930 [Vitis vinifera]
          Length = 724

 Score =  114 bits (284), Expect = 1e-23
 Identities = 50/69 (72%), Positives = 59/69 (85%)
 Frame = +3

Query: 3   HSEKLAIAFGMISLNPNAAIRVVKNLRVCLDCHTVAKLISRLYKREVILRDRHVFHYFRD 182
           HSEKLAIAFG+IS  P   IR+VKNLR+C+DCH VAKL+S++Y REVI+RDR  FH+FR 
Sbjct: 656 HSEKLAIAFGLISSGPGVTIRIVKNLRMCVDCHYVAKLVSKVYNREVIVRDRTRFHHFRH 715

Query: 183 GSCSCKDYW 209
           GSCSCKDYW
Sbjct: 716 GSCSCKDYW 724


>emb|CBI39619.3| unnamed protein product [Vitis vinifera]
          Length = 640

 Score =  112 bits (281), Expect = 2e-23
 Identities = 45/69 (65%), Positives = 60/69 (86%)
 Frame = +3

Query: 3   HSEKLAIAFGMISLNPNAAIRVVKNLRVCLDCHTVAKLISRLYKREVILRDRHVFHYFRD 182
           HSEKLAIAFG+++++P   IR++KNLR+C DCHT AKLIS+ Y RE+++RDRH FHYF++
Sbjct: 572 HSEKLAIAFGLLTISPPTPIRIMKNLRICNDCHTAAKLISKAYAREIVVRDRHRFHYFKE 631

Query: 183 GSCSCKDYW 209
           G+CSC DYW
Sbjct: 632 GACSCMDYW 640


>ref|XP_002277347.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Vitis vinifera]
          Length = 808

 Score =  112 bits (281), Expect = 2e-23
 Identities = 45/69 (65%), Positives = 60/69 (86%)
 Frame = +3

Query: 3   HSEKLAIAFGMISLNPNAAIRVVKNLRVCLDCHTVAKLISRLYKREVILRDRHVFHYFRD 182
           HSEKLAIAFG+++++P   IR++KNLR+C DCHT AKLIS+ Y RE+++RDRH FHYF++
Sbjct: 740 HSEKLAIAFGLLTISPPTPIRIMKNLRICNDCHTAAKLISKAYAREIVVRDRHRFHYFKE 799

Query: 183 GSCSCKDYW 209
           G+CSC DYW
Sbjct: 800 GACSCMDYW 808


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