BLASTX nr result

ID: Dioscorea21_contig00023697 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00023697
         (317 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAK04913.1| predicted protein [Hordeum vulgare subsp. vulgare]     69   3e-10
ref|XP_002518819.1| DNA binding protein, putative [Ricinus commu...    68   9e-10
ref|XP_004165011.1| PREDICTED: PHD finger protein At1g33420-like...    67   2e-09
ref|XP_003536185.1| PREDICTED: PHD finger protein At1g33420-like...    66   3e-09
ref|XP_003555537.1| PREDICTED: PHD finger protein At1g33420-like...    65   4e-09

>dbj|BAK04913.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 654

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 43/140 (30%), Positives = 65/140 (46%), Gaps = 35/140 (25%)
 Frame = -2

Query: 316 FVDRHARTSPA--NAFAAGSAVRTWRVAFKVGEAVESGESPATVELIIAVEDVARSRSVY 143
           F+ RHA  +         G A   W+V F+VG   E GE+   V + +  EDV R+R V+
Sbjct: 81  FLSRHAAPAAEWEQGAVLGDAGAVWQVGFRVGG--EEGEASVVV-MDVVEEDVPRARRVH 137

Query: 142 CDQCRIVG---------------------------------TVTASRRQHVMDVSKKFGL 62
           CD C + G                                  +  +R+  V+DVSKKF +
Sbjct: 138 CDHCTVAGWSRHPVCGKKYHFIIRNEKMPSCKTCWRCGLMVQLFETRKVSVLDVSKKFEV 197

Query: 61  EYRLLHAIVSGHPWYGKWGY 2
           +YR+L+A+ +G  WYG+WG+
Sbjct: 198 DYRVLNAVATGCSWYGQWGF 217


>ref|XP_002518819.1| DNA binding protein, putative [Ricinus communis]
           gi|223542200|gb|EEF43744.1| DNA binding protein,
           putative [Ricinus communis]
          Length = 677

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 29/44 (65%), Positives = 34/44 (77%)
 Frame = -2

Query: 133 CRIVGTVTASRRQHVMDVSKKFGLEYRLLHAIVSGHPWYGKWGY 2
           C+ +G     R+  VMDVSKK+GLEYRLLHAI+ GHPWYG WGY
Sbjct: 215 CKTLGV----RKVSVMDVSKKYGLEYRLLHAIIKGHPWYGDWGY 254



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 32/67 (47%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
 Frame = -2

Query: 316 FVDRHARTSPANAFAAGSAVRTWRVAFKVGEAVES-GESPATVELIIAVEDVARSRSVYC 140
           F+  HA   P ++      + TW+++F+VG+  +    SPA V L I  EDVARSRSVYC
Sbjct: 43  FLMEHALFPPPSSLFPH--LMTWQISFRVGDLTDGLDSSPAVVSLDIVEEDVARSRSVYC 100

Query: 139 DQCRIVG 119
           DQCR+VG
Sbjct: 101 DQCRVVG 107


>ref|XP_004165011.1| PREDICTED: PHD finger protein At1g33420-like [Cucumis sativus]
          Length = 668

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 28/44 (63%), Positives = 35/44 (79%)
 Frame = -2

Query: 133 CRIVGTVTASRRQHVMDVSKKFGLEYRLLHAIVSGHPWYGKWGY 2
           C+++G     R+  VMDVSKK+G+EYRLLHAI  GHPWYG+WGY
Sbjct: 194 CKMLGV----RKVSVMDVSKKYGVEYRLLHAITKGHPWYGEWGY 233



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 32/67 (47%), Positives = 43/67 (64%), Gaps = 1/67 (1%)
 Frame = -2

Query: 316 FVDRHARTSPANAFAAGSAVRTWRVAFKVGEAVESGES-PATVELIIAVEDVARSRSVYC 140
           F+ +HA   P ++      + TW++ F+VG+ V   +S PA V L I  EDV RSRSVYC
Sbjct: 22  FLSKHALLPPPSSLFPH--LLTWQILFRVGDLVHGPDSQPAVVYLDIVEEDVPRSRSVYC 79

Query: 139 DQCRIVG 119
           DQCR+VG
Sbjct: 80  DQCRVVG 86


>ref|XP_003536185.1| PREDICTED: PHD finger protein At1g33420-like [Glycine max]
          Length = 707

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 28/44 (63%), Positives = 34/44 (77%)
 Frame = -2

Query: 133 CRIVGTVTASRRQHVMDVSKKFGLEYRLLHAIVSGHPWYGKWGY 2
           C+ +G     R+  VMDVSKK+G+EYRLLHAI+ GHPWYG WGY
Sbjct: 220 CKTLGV----RKVSVMDVSKKYGIEYRLLHAIMKGHPWYGDWGY 259



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 31/66 (46%), Positives = 42/66 (63%)
 Frame = -2

Query: 316 FVDRHARTSPANAFAAGSAVRTWRVAFKVGEAVESGESPATVELIIAVEDVARSRSVYCD 137
           F+ +HA   P +A      + TW++ F+VGE  E  ++P  V L +  EDVARSRSVYCD
Sbjct: 50  FLTKHALLPPPSALFPH--LLTWQIVFRVGELTEGPDAPV-VCLDVVEEDVARSRSVYCD 106

Query: 136 QCRIVG 119
           QCR+ G
Sbjct: 107 QCRVFG 112


>ref|XP_003555537.1| PREDICTED: PHD finger protein At1g33420-like [Glycine max]
          Length = 699

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 27/44 (61%), Positives = 34/44 (77%)
 Frame = -2

Query: 133 CRIVGTVTASRRQHVMDVSKKFGLEYRLLHAIVSGHPWYGKWGY 2
           C+ +G     R+  VMDVSKK+G+EYR+LHAI+ GHPWYG WGY
Sbjct: 220 CKTLGV----RKVSVMDVSKKYGIEYRMLHAIMKGHPWYGDWGY 259



 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 32/66 (48%), Positives = 43/66 (65%)
 Frame = -2

Query: 316 FVDRHARTSPANAFAAGSAVRTWRVAFKVGEAVESGESPATVELIIAVEDVARSRSVYCD 137
           F+ +HA   P +A      + TW++ F+VGE  E  ++PA V L +  EDVARSRSVYCD
Sbjct: 50  FLTKHALLPPPSALFPH--LLTWQIVFRVGELTEGPDAPA-VCLDVVEEDVARSRSVYCD 106

Query: 136 QCRIVG 119
           QCR+ G
Sbjct: 107 QCRVFG 112


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