BLASTX nr result

ID: Dioscorea21_contig00023682 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00023682
         (240 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001146864.1| LOC100280472 [Zea mays] gi|195604408|gb|ACG2...   135   3e-30
gb|ACL52579.1| unknown [Zea mays] gi|413933429|gb|AFW67980.1| tr...   133   1e-29
gb|EEC75941.1| hypothetical protein OsI_13037 [Oryza sativa Indi...   133   1e-29
ref|NP_001148001.1| transposon protein [Zea mays] gi|195615062|g...   133   1e-29
gb|AAP68376.1| putative protein phosphatase 2A regulatory subuni...   133   1e-29

>ref|NP_001146864.1| LOC100280472 [Zea mays] gi|195604408|gb|ACG24034.1| transposon
           protein [Zea mays] gi|224031429|gb|ACN34790.1| unknown
           [Zea mays] gi|414871926|tpg|DAA50483.1| TPA: Transposon
           protein [Zea mays]
          Length = 522

 Score =  135 bits (341), Expect = 3e-30
 Identities = 66/79 (83%), Positives = 66/79 (83%)
 Frame = -3

Query: 238 DYKLADTVIRGLLKYWPVTNCGKXXXXXXXXXXXXEATQPAEFQRCMVPLFKQIGRCLNS 59
           DYKLADTVIRGLLKYWPVTNC K            EATQPAEFQRCMVPLFKQIGRCLNS
Sbjct: 350 DYKLADTVIRGLLKYWPVTNCQKEVLFLGELEEVLEATQPAEFQRCMVPLFKQIGRCLNS 409

Query: 58  SHFQVAERALFLWNNDHIV 2
           SHFQVAERALFLWNNDHIV
Sbjct: 410 SHFQVAERALFLWNNDHIV 428


>gb|ACL52579.1| unknown [Zea mays] gi|413933429|gb|AFW67980.1| transposon protein
           [Zea mays]
          Length = 523

 Score =  133 bits (335), Expect = 1e-29
 Identities = 65/79 (82%), Positives = 65/79 (82%)
 Frame = -3

Query: 238 DYKLADTVIRGLLKYWPVTNCGKXXXXXXXXXXXXEATQPAEFQRCMVPLFKQIGRCLNS 59
           DYKLADTVIRGLLKYWPVTNC K            EATQPAEFQRCMVPLFKQI RCLNS
Sbjct: 351 DYKLADTVIRGLLKYWPVTNCQKEVLFLGELEEVLEATQPAEFQRCMVPLFKQIARCLNS 410

Query: 58  SHFQVAERALFLWNNDHIV 2
           SHFQVAERALFLWNNDHIV
Sbjct: 411 SHFQVAERALFLWNNDHIV 429


>gb|EEC75941.1| hypothetical protein OsI_13037 [Oryza sativa Indica Group]
           gi|222625568|gb|EEE59700.1| hypothetical protein
           OsJ_12124 [Oryza sativa Japonica Group]
          Length = 256

 Score =  133 bits (335), Expect = 1e-29
 Identities = 65/79 (82%), Positives = 65/79 (82%)
 Frame = -3

Query: 238 DYKLADTVIRGLLKYWPVTNCGKXXXXXXXXXXXXEATQPAEFQRCMVPLFKQIGRCLNS 59
           DYKLADTVIRGLLKYWPV NC K            EATQPAEFQRCMVPLFKQIGRCLNS
Sbjct: 85  DYKLADTVIRGLLKYWPVINCQKEVLFLGELEEVLEATQPAEFQRCMVPLFKQIGRCLNS 144

Query: 58  SHFQVAERALFLWNNDHIV 2
           SHFQVAERALFLWNNDHIV
Sbjct: 145 SHFQVAERALFLWNNDHIV 163


>ref|NP_001148001.1| transposon protein [Zea mays] gi|195615062|gb|ACG29361.1|
           transposon protein [Zea mays]
          Length = 522

 Score =  133 bits (335), Expect = 1e-29
 Identities = 65/79 (82%), Positives = 65/79 (82%)
 Frame = -3

Query: 238 DYKLADTVIRGLLKYWPVTNCGKXXXXXXXXXXXXEATQPAEFQRCMVPLFKQIGRCLNS 59
           DYKLADTVIRGLLKYWPVTNC K            EATQPAEFQRCMVPLFKQI RCLNS
Sbjct: 351 DYKLADTVIRGLLKYWPVTNCQKEVLFLGELEEVLEATQPAEFQRCMVPLFKQIARCLNS 410

Query: 58  SHFQVAERALFLWNNDHIV 2
           SHFQVAERALFLWNNDHIV
Sbjct: 411 SHFQVAERALFLWNNDHIV 429


>gb|AAP68376.1| putative protein phosphatase 2A regulatory subunit B' [Oryza sativa
           Japonica Group] gi|108710424|gb|ABF98219.1| transposon
           protein, putative, unclassified, expressed [Oryza sativa
           Japonica Group] gi|108710425|gb|ABF98220.1| transposon
           protein, putative, unclassified, expressed [Oryza sativa
           Japonica Group] gi|108710426|gb|ABF98221.1| transposon
           protein, putative, unclassified, expressed [Oryza sativa
           Japonica Group]
          Length = 535

 Score =  133 bits (335), Expect = 1e-29
 Identities = 65/79 (82%), Positives = 65/79 (82%)
 Frame = -3

Query: 238 DYKLADTVIRGLLKYWPVTNCGKXXXXXXXXXXXXEATQPAEFQRCMVPLFKQIGRCLNS 59
           DYKLADTVIRGLLKYWPV NC K            EATQPAEFQRCMVPLFKQIGRCLNS
Sbjct: 364 DYKLADTVIRGLLKYWPVINCQKEVLFLGELEEVLEATQPAEFQRCMVPLFKQIGRCLNS 423

Query: 58  SHFQVAERALFLWNNDHIV 2
           SHFQVAERALFLWNNDHIV
Sbjct: 424 SHFQVAERALFLWNNDHIV 442