BLASTX nr result

ID: Dioscorea21_contig00023669 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00023669
         (584 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002270858.1| PREDICTED: iron-sulfur cluster co-chaperone ...    83   6e-28
ref|NP_001066729.1| Os12g0456200 [Oryza sativa Japonica Group] g...    88   4e-26
ref|XP_003576466.1| PREDICTED: iron-sulfur cluster co-chaperone ...    87   8e-26
ref|XP_002458122.1| hypothetical protein SORBIDRAFT_03g027220 [S...    84   2e-25
tpg|DAA58880.1| TPA: hypothetical protein ZEAMMB73_327018 [Zea m...    82   2e-25

>ref|XP_002270858.1| PREDICTED: iron-sulfur cluster co-chaperone protein HscB,
           mitochondrial isoform 1 [Vitis vinifera]
           gi|359481056|ref|XP_003632561.1| PREDICTED: iron-sulfur
           cluster co-chaperone protein HscB, mitochondrial isoform
           2 [Vitis vinifera] gi|296089348|emb|CBI39120.3| unnamed
           protein product [Vitis vinifera]
          Length = 267

 Score = 82.8 bits (203), Expect(2) = 6e-28
 Identities = 36/44 (81%), Positives = 42/44 (95%)
 Frame = +1

Query: 451 ERTYEIKDNNLEGKYKDWQKKLHPDLVHSKSEKERAFAAEQSAR 582
           E+ YE++DNNLEGKYKDWQKKLHPDLVHSKSE+E+ +AAEQSAR
Sbjct: 116 EKKYELEDNNLEGKYKDWQKKLHPDLVHSKSEEEKEYAAEQSAR 159



 Score = 67.0 bits (162), Expect(2) = 6e-28
 Identities = 39/96 (40%), Positives = 50/96 (52%), Gaps = 3/96 (3%)
 Frame = +3

Query: 102 SHHLQEAHSYPYSYVKVPFFSSVLFCGQSFSKNHLDFLHKEFSPSRRWCHTSKSLS---Q 272
           S  L    + P S +     SS     + F  +  DFL      SR+ C    +     +
Sbjct: 20  SFSLNSTLNIPSSTIFSSPCSSTAQYSRVFWSSSYDFLGS-LKFSRKLCSAQSAEQVHVR 78

Query: 273 CWSCGKTAASWPFLVCDTCRSVQPMDPSVDYFQIFG 380
           CW+C   A + PFL CD+CRSVQP+DPSVDYFQIFG
Sbjct: 79  CWNCKAAAQTTPFLACDSCRSVQPVDPSVDYFQIFG 114


>ref|NP_001066729.1| Os12g0456200 [Oryza sativa Japonica Group]
           gi|77555568|gb|ABA98364.1| co-chaperone Hsc20 family
           protein, expressed [Oryza sativa Japonica Group]
           gi|113649236|dbj|BAF29748.1| Os12g0456200 [Oryza sativa
           Japonica Group] gi|125536539|gb|EAY83027.1| hypothetical
           protein OsI_38245 [Oryza sativa Indica Group]
           gi|125579253|gb|EAZ20399.1| hypothetical protein
           OsJ_36006 [Oryza sativa Japonica Group]
           gi|215697480|dbj|BAG91474.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 260

 Score = 87.8 bits (216), Expect(2) = 4e-26
 Identities = 41/43 (95%), Positives = 41/43 (95%)
 Frame = +1

Query: 451 ERTYEIKDNNLEGKYKDWQKKLHPDLVHSKSEKERAFAAEQSA 579
           ER Y IKDNNLEGKYKDWQKKLHPDLVHSKSEKERAFAAEQSA
Sbjct: 109 EREYTIKDNNLEGKYKDWQKKLHPDLVHSKSEKERAFAAEQSA 151



 Score = 55.8 bits (133), Expect(2) = 4e-26
 Identities = 28/49 (57%), Positives = 35/49 (71%), Gaps = 6/49 (12%)
 Frame = +3

Query: 252 TSKSLS------QCWSCGKTAASWPFLVCDTCRSVQPMDPSVDYFQIFG 380
           +S+SLS      +CWSCG   AS  FL C +C SVQP+DP+VDYF+IFG
Sbjct: 62  SSRSLSDRAGGGECWSCG---ASGAFLSCGSCGSVQPVDPAVDYFRIFG 107


>ref|XP_003576466.1| PREDICTED: iron-sulfur cluster co-chaperone protein HscB,
           mitochondrial-like [Brachypodium distachyon]
          Length = 258

 Score = 86.7 bits (213), Expect(2) = 8e-26
 Identities = 40/43 (93%), Positives = 41/43 (95%)
 Frame = +1

Query: 451 ERTYEIKDNNLEGKYKDWQKKLHPDLVHSKSEKERAFAAEQSA 579
           +R Y IKDNNLEGKYKDWQKKLHPDLVHSKSEKERAFAAEQSA
Sbjct: 107 DRGYNIKDNNLEGKYKDWQKKLHPDLVHSKSEKERAFAAEQSA 149



 Score = 55.8 bits (133), Expect(2) = 8e-26
 Identities = 24/37 (64%), Positives = 29/37 (78%)
 Frame = +3

Query: 270 QCWSCGKTAASWPFLVCDTCRSVQPMDPSVDYFQIFG 380
           +CWSCG   A   FL C +CRSVQP+DP+VDYF+IFG
Sbjct: 72  ECWSCG---AKGVFLSCGSCRSVQPVDPAVDYFRIFG 105


>ref|XP_002458122.1| hypothetical protein SORBIDRAFT_03g027220 [Sorghum bicolor]
           gi|241930097|gb|EES03242.1| hypothetical protein
           SORBIDRAFT_03g027220 [Sorghum bicolor]
          Length = 264

 Score = 84.0 bits (206), Expect(2) = 2e-25
 Identities = 38/43 (88%), Positives = 40/43 (93%)
 Frame = +1

Query: 451 ERTYEIKDNNLEGKYKDWQKKLHPDLVHSKSEKERAFAAEQSA 579
           +R Y IKDNNLEGKYKDWQKKLHPDLVHSKSEKER +AAEQSA
Sbjct: 113 KREYNIKDNNLEGKYKDWQKKLHPDLVHSKSEKERGYAAEQSA 155



 Score = 57.0 bits (136), Expect(2) = 2e-25
 Identities = 25/36 (69%), Positives = 28/36 (77%)
 Frame = +3

Query: 273 CWSCGKTAASWPFLVCDTCRSVQPMDPSVDYFQIFG 380
           CWSCG T A   FL C +C SVQP+DP+VDYFQIFG
Sbjct: 79  CWSCGATGA---FLSCGSCGSVQPVDPAVDYFQIFG 111


>tpg|DAA58880.1| TPA: hypothetical protein ZEAMMB73_327018 [Zea mays]
          Length = 259

 Score = 81.6 bits (200), Expect(2) = 2e-25
 Identities = 37/43 (86%), Positives = 39/43 (90%)
 Frame = +1

Query: 451 ERTYEIKDNNLEGKYKDWQKKLHPDLVHSKSEKERAFAAEQSA 579
           +R Y I DNNLEGKYKDWQKKLHPDLVHSKSEKER +AAEQSA
Sbjct: 108 KREYNITDNNLEGKYKDWQKKLHPDLVHSKSEKERGYAAEQSA 150



 Score = 59.3 bits (142), Expect(2) = 2e-25
 Identities = 28/51 (54%), Positives = 33/51 (64%)
 Frame = +3

Query: 228 SPSRRWCHTSKSLSQCWSCGKTAASWPFLVCDTCRSVQPMDPSVDYFQIFG 380
           +P R   + S     CWSCG T A   FL C +C SVQP+DP+VDYFQIFG
Sbjct: 59  APFRSLSNQSSGGGACWSCGATGA---FLSCGSCGSVQPVDPAVDYFQIFG 106


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