BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00023664
         (710 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002531466.1| pentatricopeptide repeat-containing protein,...   116   4e-24
ref|NP_199547.1| pentatricopeptide repeat-containing protein [Ar...   115   9e-24
ref|XP_002863348.1| pentatricopeptide repeat-containing protein ...   105   9e-21
ref|XP_003631455.1| PREDICTED: pentatricopeptide repeat-containi...   104   2e-20
emb|CBI25851.3| unnamed protein product [Vitis vinifera]              104   2e-20

>ref|XP_002531466.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528920|gb|EEF30916.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 518

 Score =  116 bits (291), Expect = 4e-24
 Identities = 58/152 (38%), Positives = 88/152 (57%)
 Frame = +2

Query: 254 LRFFVWAGLHRSHRHSAFAYTAASHSLRLRSHPEALVLLLDSYRRNSVPVSLRTFKIILN 433
           LRFFVWAG   ++RHS+F Y+ A     ++ +P+A++ L + YR     V+L+TFK++LN
Sbjct: 77  LRFFVWAGYQSNYRHSSFLYSKACKLFNIKQNPQAVLDLFEFYRAEKCVVNLKTFKVVLN 136

Query: 434 LCFHSNLVSPALSLFNQMPSFGCHPDTPFFNTVLRLLAHNLETHHASLALKLFDEMLASG 613
           LC    L + A  +  +M  F    DT  +  V+RL     +     +A KL  EM  + 
Sbjct: 137 LCKEGTLANEAFLVLRKMQEFDIQADTKAYTIVIRLFC---DKGDMDMAQKLMGEMSFND 193

Query: 614 LRPDIVTYVLVIKALCAANQVSEACRILSQMR 709
           L PD+VTYV +IK  C   ++ EACR++ +MR
Sbjct: 194 LYPDMVTYVSIIKGFCDIGRLEEACRLVKEMR 225


>ref|NP_199547.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75180684|sp|Q9LVS3.1|PP422_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g47360 gi|8809619|dbj|BAA97170.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|332008119|gb|AED95502.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 477

 Score =  115 bits (288), Expect = 9e-24
 Identities = 57/151 (37%), Positives = 90/151 (59%)
 Frame = +2

Query: 254 LRFFVWAGLHRSHRHSAFAYTAASHSLRLRSHPEALVLLLDSYRRNSVPVSLRTFKIILN 433
           LRFF+WAG   SHRHSA+ YT A   L++R+ P+ +  +++SYR+    V+++T +I+L 
Sbjct: 79  LRFFIWAGTLSSHRHSAYMYTKACDILKIRAKPDLIKYVIESYRKEECFVNVKTMRIVLT 138

Query: 434 LCFHSNLVSPALSLFNQMPSFGCHPDTPFFNTVLRLLAHNLETHHASLALKLFDEMLASG 613
           LC  +NL   AL +  + P F    DT  +N V+RL A   + + A + +K   EM   G
Sbjct: 139 LCNQANLADEALWVLRKFPEFNVCADTVAYNLVIRLFADKGDLNIADMLIK---EMDCVG 195

Query: 614 LRPDIVTYVLVIKALCAANQVSEACRILSQM 706
           L PD++TY  +I   C A ++ +A R+  +M
Sbjct: 196 LYPDVITYTSMINGYCNAGKIDDAWRLAKEM 226


>ref|XP_002863348.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297309183|gb|EFH39607.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 477

 Score =  105 bits (262), Expect = 9e-21
 Identities = 54/151 (35%), Positives = 86/151 (56%)
 Frame = +2

Query: 254 LRFFVWAGLHRSHRHSAFAYTAASHSLRLRSHPEALVLLLDSYRRNSVPVSLRTFKIILN 433
           LRFF+WAG   SHRHS + YT A   L++R++P+ +  ++++Y++    VS++T  I+L 
Sbjct: 79  LRFFIWAGTQSSHRHSPYMYTKACDFLKIRANPDLIKDVVEAYKKEECFVSVKTMWIVLT 138

Query: 434 LCFHSNLVSPALSLFNQMPSFGCHPDTPFFNTVLRLLAHNLETHHASLALKLFDEMLASG 613
           LC  + L   AL +  + P F    DT  +N V+RL A   +    S+A  L  EM    
Sbjct: 139 LCNQAKLADEALWVLRKFPEFDLCADTVAYNLVIRLFA---DKGDLSMADMLMKEMDCVD 195

Query: 614 LRPDIVTYVLVIKALCAANQVSEACRILSQM 706
           L PD++TY  +I   C A ++ EA ++  +M
Sbjct: 196 LYPDVITYTAMINGYCNAGKIDEAWKLAKEM 226


>ref|XP_003631455.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g47360-like [Vitis vinifera]
          Length = 638

 Score =  104 bits (259), Expect = 2e-20
 Identities = 51/152 (33%), Positives = 86/152 (56%)
 Frame = +2

Query: 254 LRFFVWAGLHRSHRHSAFAYTAASHSLRLRSHPEALVLLLDSYRRNSVPVSLRTFKIILN 433
           LRFF+WAG+   +RHS++ Y+ A    R+  +P A++ ++++YR     VS++TF ++L+
Sbjct: 74  LRFFIWAGVQSYYRHSSYLYSKACELFRINQNPRAIIDVIEAYRVEGTVVSVKTFNVVLH 133

Query: 434 LCFHSNLVSPALSLFNQMPSFGCHPDTPFFNTVLRLLAHNLETHHASLALKLFDEMLASG 613
           L   + L   AL +  +M  F    DT  +N+V+RL     E     LA  L  EM    
Sbjct: 134 LLREAKLADEALWILKKMAEFNIRADTVAYNSVIRLFC---EKGDMDLAAGLMKEMGLID 190

Query: 614 LRPDIVTYVLVIKALCAANQVSEACRILSQMR 709
           L P+++TYV +IK  C   ++ +AC++   M+
Sbjct: 191 LYPNMITYVTMIKGFCNVGRLEDACKLFKVMK 222


>emb|CBI25851.3| unnamed protein product [Vitis vinifera]
          Length = 528

 Score =  104 bits (259), Expect = 2e-20
 Identities = 51/152 (33%), Positives = 86/152 (56%)
 Frame = +2

Query: 254 LRFFVWAGLHRSHRHSAFAYTAASHSLRLRSHPEALVLLLDSYRRNSVPVSLRTFKIILN 433
           LRFF+WAG+   +RHS++ Y+ A    R+  +P A++ ++++YR     VS++TF ++L+
Sbjct: 80  LRFFIWAGVQSYYRHSSYLYSKACELFRINQNPRAIIDVIEAYRVEGTVVSVKTFNVVLH 139

Query: 434 LCFHSNLVSPALSLFNQMPSFGCHPDTPFFNTVLRLLAHNLETHHASLALKLFDEMLASG 613
           L   + L   AL +  +M  F    DT  +N+V+RL     E     LA  L  EM    
Sbjct: 140 LLREAKLADEALWILKKMAEFNIRADTVAYNSVIRLFC---EKGDMDLAAGLMKEMGLID 196

Query: 614 LRPDIVTYVLVIKALCAANQVSEACRILSQMR 709
           L P+++TYV +IK  C   ++ +AC++   M+
Sbjct: 197 LYPNMITYVTMIKGFCNVGRLEDACKLFKVMK 228