BLASTX nr result

ID: Dioscorea21_contig00023647 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00023647
         (231 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002511863.1| CRP, putative [Ricinus communis] gi|22354904...    68   9e-10
ref|XP_003562672.1| PREDICTED: uncharacterized protein LOC100846...    64   2e-08
ref|XP_002274479.2| PREDICTED: uncharacterized protein LOC100263...    62   4e-08
emb|CBI40380.3| unnamed protein product [Vitis vinifera]               62   4e-08
ref|XP_002320796.1| predicted protein [Populus trichocarpa] gi|2...    62   4e-08

>ref|XP_002511863.1| CRP, putative [Ricinus communis] gi|223549043|gb|EEF50532.1| CRP,
            putative [Ricinus communis]
          Length = 2264

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 39/79 (49%), Positives = 55/79 (69%), Gaps = 3/79 (3%)
 Frame = -3

Query: 229  PGMSTPSQHAGN--QRTSVPSARPTTAMQGKSRSLPAQ-DLDMEIDPWTLLEDGTGTASA 59
            P ++    +AG   Q+  +P AR TT + G+S+SLP Q D DMEIDPWTLLEDGTG+  +
Sbjct: 2164 PSITISGLYAGMPPQKNPLPLAR-TTNVPGRSKSLPLQQDNDMEIDPWTLLEDGTGSGPS 2222

Query: 58   ANNSSNVGGPGADHSNLKA 2
            ++N++ V   G DH+NL+A
Sbjct: 2223 SSNAAVVS--GGDHANLRA 2239


>ref|XP_003562672.1| PREDICTED: uncharacterized protein LOC100846378 [Brachypodium
            distachyon]
          Length = 2094

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 32/76 (42%), Positives = 42/76 (55%)
 Frame = -3

Query: 229  PGMSTPSQHAGNQRTSVPSARPTTAMQGKSRSLPAQDLDMEIDPWTLLEDGTGTASAANN 50
            P  S+ S     Q+ +  S  PT         LP+QD +ME+DPWTLLEDGT   S ++ 
Sbjct: 1994 PLQSSTSTAGPQQKNASLSWVPTNLSSRSKAGLPSQDPEMEVDPWTLLEDGTSCPSMSSG 2053

Query: 49   SSNVGGPGADHSNLKA 2
            S+   G   DH+NLKA
Sbjct: 2054 SNGTSGISGDHANLKA 2069


>ref|XP_002274479.2| PREDICTED: uncharacterized protein LOC100263628 [Vitis vinifera]
          Length = 2272

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 36/81 (44%), Positives = 49/81 (60%), Gaps = 5/81 (6%)
 Frame = -3

Query: 229  PGMSTPSQHAGN----QRTSVPSARPTTAMQGKSRSLPAQ-DLDMEIDPWTLLEDGTGTA 65
            P +S P+ H GN    QR S    RP     GK +++P Q D D+EIDPWTLLEDG G  
Sbjct: 2174 PSLSFPAFHPGNTNQSQRNSSSLVRP-----GKLKNMPLQQDHDIEIDPWTLLEDGAGAG 2228

Query: 64   SAANNSSNVGGPGADHSNLKA 2
             ++ N++ +G    DH+NL+A
Sbjct: 2229 PSSGNTAVIG--SGDHANLRA 2247


>emb|CBI40380.3| unnamed protein product [Vitis vinifera]
          Length = 2037

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 36/81 (44%), Positives = 49/81 (60%), Gaps = 5/81 (6%)
 Frame = -3

Query: 229  PGMSTPSQHAGN----QRTSVPSARPTTAMQGKSRSLPAQ-DLDMEIDPWTLLEDGTGTA 65
            P +S P+ H GN    QR S    RP     GK +++P Q D D+EIDPWTLLEDG G  
Sbjct: 1939 PSLSFPAFHPGNTNQSQRNSSSLVRP-----GKLKNMPLQQDHDIEIDPWTLLEDGAGAG 1993

Query: 64   SAANNSSNVGGPGADHSNLKA 2
             ++ N++ +G    DH+NL+A
Sbjct: 1994 PSSGNTAVIG--SGDHANLRA 2012


>ref|XP_002320796.1| predicted protein [Populus trichocarpa] gi|222861569|gb|EEE99111.1|
           predicted protein [Populus trichocarpa]
          Length = 367

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 33/65 (50%), Positives = 43/65 (66%), Gaps = 1/65 (1%)
 Frame = -3

Query: 193 QRTSVPSARPTTAMQGKSRSLPAQ-DLDMEIDPWTLLEDGTGTASAANNSSNVGGPGADH 17
           Q+   P AR    +  KS+ LP Q D DMEIDPWTLLEDGTG+  +++N S +G    DH
Sbjct: 280 QKNPAPLARSANNISTKSKPLPLQQDGDMEIDPWTLLEDGTGSGPSSSNISVIG--SIDH 337

Query: 16  SNLKA 2
           +NL+A
Sbjct: 338 ANLRA 342


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