BLASTX nr result

ID: Dioscorea21_contig00023637 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00023637
         (276 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAD83423.2| cytochrome c maturation protein CcmC (mitochondr...   168   4e-40
ref|YP_002000559.1| cytochrome c biogenesis C [Oryza sativa Japo...   164   5e-39
sp|P92527.4|CCMC_ARATH RecName: Full=Putative cytochrome c biosy...   163   2e-38
ref|YP_003875485.1| cytochrome c biogenesis C [Silene latifolia]...   163   2e-38
ref|YP_626380.2| orf518 gene product (mitochondrion) [Beta vulga...   162   3e-38

>dbj|BAD83423.2| cytochrome c maturation protein CcmC (mitochondrion) [Nicotiana
           tabacum]
          Length = 250

 Score =  168 bits (426), Expect = 4e-40
 Identities = 85/86 (98%), Positives = 86/86 (100%)
 Frame = +1

Query: 1   LASILICVGLIDIPIIKFSVNWWNTLHQPGSISRSGTSIHVSMLIPILSNFANFLFLTCI 180
           LASILICVGLIDIPIIKFSVNWWNTLHQPGSISRSGTSIHVSMLIPILSNFANFLFLTCI
Sbjct: 149 LASILICVGLIDIPIIKFSVNWWNTLHQPGSISRSGTSIHVSMLIPILSNFANFLFLTCI 208

Query: 181 LFVLETRLLILSFLESSLTEEIEAQE 258
           LFVLETRLLILSFLESSLTEEIEA+E
Sbjct: 209 LFVLETRLLILSFLESSLTEEIEARE 234


>ref|YP_002000559.1| cytochrome c biogenesis C [Oryza sativa Japonica Group]
           gi|7442628|pir||S71458 ABC-type heme transporter chain
           homolog - rice mitochondrion gi|60498740|dbj|BAC19863.2|
           Cytochrome c biogenesis C [Oryza sativa Japonica Group]
          Length = 240

 Score =  164 bits (416), Expect = 5e-39
 Identities = 83/86 (96%), Positives = 84/86 (97%)
 Frame = +1

Query: 1   LASILICVGLIDIPIIKFSVNWWNTLHQPGSISRSGTSIHVSMLIPILSNFANFLFLTCI 180
           LASILICVGLIDIPIIKFSVNWWNTLHQPGSISR GTSIHVSMLIPILSNFANFLF TCI
Sbjct: 149 LASILICVGLIDIPIIKFSVNWWNTLHQPGSISRFGTSIHVSMLIPILSNFANFLFFTCI 208

Query: 181 LFVLETRLLILSFLESSLTEEIEAQE 258
           LFVLETRLLILSFLESSLTEEIEA+E
Sbjct: 209 LFVLETRLLILSFLESSLTEEIEARE 234


>sp|P92527.4|CCMC_ARATH RecName: Full=Putative cytochrome c biosynthesis ccmC-like
           mitochondrial protein; AltName: Full=ABC transporter I
           family member 3; Short=ABC transporter ABCI.3;
           Short=AtABCI3
          Length = 232

 Score =  163 bits (412), Expect = 2e-38
 Identities = 82/84 (97%), Positives = 83/84 (98%)
 Frame = +1

Query: 1   LASILICVGLIDIPIIKFSVNWWNTLHQPGSISRSGTSIHVSMLIPILSNFANFLFLTCI 180
           LASILICVGLIDIPIIKFSVNWWNTLHQPGSISR GTSIHVSMLIPILSNFANFLFLTCI
Sbjct: 149 LASILICVGLIDIPIIKFSVNWWNTLHQPGSISRFGTSIHVSMLIPILSNFANFLFLTCI 208

Query: 181 LFVLETRLLILSFLESSLTEEIEA 252
           LFVLETRLLILSFLESS+TEEIEA
Sbjct: 209 LFVLETRLLILSFLESSITEEIEA 232


>ref|YP_003875485.1| cytochrome c biogenesis C [Silene latifolia]
           gi|301338020|gb|ADK73312.1| cytochrome c biogenesis C
           [Silene latifolia]
          Length = 239

 Score =  163 bits (412), Expect = 2e-38
 Identities = 82/86 (95%), Positives = 83/86 (96%)
 Frame = +1

Query: 1   LASILICVGLIDIPIIKFSVNWWNTLHQPGSISRSGTSIHVSMLIPILSNFANFLFLTCI 180
           LASILICVGLIDIPIIKFSVNWWNTLHQPGSISR GTSIHVSMLIPILSNFANFLFLTCI
Sbjct: 138 LASILICVGLIDIPIIKFSVNWWNTLHQPGSISRFGTSIHVSMLIPILSNFANFLFLTCI 197

Query: 181 LFVLETRLLILSFLESSLTEEIEAQE 258
            FVLETRLLILSFLESSLTEEIE +E
Sbjct: 198 FFVLETRLLILSFLESSLTEEIEVRE 223


>ref|YP_626380.2| orf518 gene product (mitochondrion) [Beta vulgaris subsp. vulgaris]
           gi|148491414|dbj|BAC75957.2| cytochrome c biogenesis
           protein [Beta vulgaris subsp. vulgaris]
          Length = 518

 Score =  162 bits (410), Expect = 3e-38
 Identities = 81/86 (94%), Positives = 84/86 (97%)
 Frame = +1

Query: 1   LASILICVGLIDIPIIKFSVNWWNTLHQPGSISRSGTSIHVSMLIPILSNFANFLFLTCI 180
           LASILICVGLIDIPIIKFSVNWWNTLHQPGSISR GTSIHVSMLIPILSNFANFLFLTC+
Sbjct: 428 LASILICVGLIDIPIIKFSVNWWNTLHQPGSISRFGTSIHVSMLIPILSNFANFLFLTCL 487

Query: 181 LFVLETRLLILSFLESSLTEEIEAQE 258
           LFV+E RLLILSFLESSLTEEIEA+E
Sbjct: 488 LFVIEIRLLILSFLESSLTEEIEARE 513


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