BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00023635
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI16128.3| unnamed protein product [Vitis vinifera]              149   3e-34
emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]   149   3e-34
ref|XP_002887091.1| pentatricopeptide repeat-containing protein ...   147   9e-34
ref|XP_002872617.1| pentatricopeptide repeat-containing protein ...   147   1e-33
ref|NP_192906.1| pentatricopeptide repeat-containing protein [Ar...   145   3e-33

>emb|CBI16128.3| unnamed protein product [Vitis vinifera]
          Length = 563

 Score =  149 bits (375), Expect = 3e-34
 Identities = 68/123 (55%), Positives = 94/123 (76%)
 Frame = +1

Query: 1   IRSDGFQLYEDMKSSGVFPSLHTFNSLIHELCKDPDLAPAFKLFDEMRLKGVACNVVTYN 180
           ++ DG +LYE MK +G+ P+++T+NS+I   C D  L  AF+LFDEMR +GVACNVVTYN
Sbjct: 249 LKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYN 308

Query: 181 TLIGGLCRQKKVKEAMRLMEKMRRDGISPSLITFNLVLDGYCKAGKLPNALKVLGQLKLS 360
           TLIGGLC++++V EA RLM +M+RDG+SP+LI++N ++DGYC  G L  A  +  Q+K S
Sbjct: 309 TLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSS 368

Query: 361 GYS 369
           G S
Sbjct: 369 GQS 371



 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 42/117 (35%), Positives = 65/117 (55%), Gaps = 7/117 (5%)
 Frame = +1

Query: 1   IRSDG----FQLYEDMKSSGVFPSLHTFNSLIHELCKDPDLAPAFKLF---DEMRLKGVA 159
           +RSD     FQ+Y  M+ +G+   ++ +  LIH LC   D+  A KLF   DEM LK   
Sbjct: 420 VRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKP-- 477

Query: 160 CNVVTYNTLIGGLCRQKKVKEAMRLMEKMRRDGISPSLITFNLVLDGYCKAGKLPNA 330
            N V YNT+I G C++     A+RL+++M  +G+ P++ ++N  +   CK  K   A
Sbjct: 478 -NDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIQILCKDEKWTEA 533



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 37/117 (31%), Positives = 63/117 (53%)
 Frame = +1

Query: 13  GFQLYEDMKSSGVFPSLHTFNSLIHELCKDPDLAPAFKLFDEMRLKGVACNVVTYNTLIG 192
           GF++   M+  G+ P++  + +LI   CK+ D+    +LF +M    V  N  TY  LI 
Sbjct: 183 GFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLIN 242

Query: 193 GLCRQKKVKEAMRLMEKMRRDGISPSLITFNLVLDGYCKAGKLPNALKVLGQLKLSG 363
           G  +    K+ + L EKM+  GI P++ T+N ++   C  GKL NA ++  +++  G
Sbjct: 243 GFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERG 299



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 32/114 (28%), Positives = 63/114 (55%)
 Frame = +1

Query: 22  LYEDMKSSGVFPSLHTFNSLIHELCKDPDLAPAFKLFDEMRLKGVACNVVTYNTLIGGLC 201
           +  +M++ G+ PS  T+  L+  L +  ++  AF+++  M   G+  ++  Y  LI GLC
Sbjct: 396 MVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLC 455

Query: 202 RQKKVKEAMRLMEKMRRDGISPSLITFNLVLDGYCKAGKLPNALKVLGQLKLSG 363
               +KEA +L + +    + P+ + +N ++ GYCK G    AL++L ++  +G
Sbjct: 456 VVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENG 509



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 32/110 (29%), Positives = 56/110 (50%)
 Frame = +1

Query: 22  LYEDMKSSGVFPSLHTFNSLIHELCKDPDLAPAFKLFDEMRLKGVACNVVTYNTLIGGLC 201
           L+  MKSSG  PSL T+N LI    +  + A    +  EM  +G++ + VTY  L+  L 
Sbjct: 361 LFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALV 420

Query: 202 RQKKVKEAMRLMEKMRRDGISPSLITFNLVLDGYCKAGKLPNALKVLGQL 351
           R   +++A ++   M + G+   +  + +++ G C  G +  A K+   L
Sbjct: 421 RSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSL 470


>emb|CAN72973.1| hypothetical protein VITISV_019486 [Vitis vinifera]
          Length = 550

 Score =  149 bits (375), Expect = 3e-34
 Identities = 68/123 (55%), Positives = 94/123 (76%)
 Frame = +1

Query: 1   IRSDGFQLYEDMKSSGVFPSLHTFNSLIHELCKDPDLAPAFKLFDEMRLKGVACNVVTYN 180
           ++ DG +LYE MK +G+ P+++T+NS+I   C D  L  AF+LFDEMR +GVACNVVTYN
Sbjct: 236 LKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERGVACNVVTYN 295

Query: 181 TLIGGLCRQKKVKEAMRLMEKMRRDGISPSLITFNLVLDGYCKAGKLPNALKVLGQLKLS 360
           TLIGGLC++++V EA RLM +M+RDG+SP+LI++N ++DGYC  G L  A  +  Q+K S
Sbjct: 296 TLIGGLCQERRVLEAERLMCRMKRDGLSPNLISYNTLIDGYCSIGNLDKASSLFNQMKSS 355

Query: 361 GYS 369
           G S
Sbjct: 356 GQS 358



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 37/117 (31%), Positives = 63/117 (53%)
 Frame = +1

Query: 13  GFQLYEDMKSSGVFPSLHTFNSLIHELCKDPDLAPAFKLFDEMRLKGVACNVVTYNTLIG 192
           GF++   M+  G+ P++  + +LI   CK+ D+    +LF +M    V  N  TY  LI 
Sbjct: 170 GFEVLGQMEEMGLSPNVVVYTTLIDGCCKNGDIERGKQLFYKMGELDVVANQYTYTVLIN 229

Query: 193 GLCRQKKVKEAMRLMEKMRRDGISPSLITFNLVLDGYCKAGKLPNALKVLGQLKLSG 363
           G  +    K+ + L EKM+  GI P++ T+N ++   C  GKL NA ++  +++  G
Sbjct: 230 GFFKMGLKKDGIELYEKMKLTGIVPNVYTYNSMICRCCNDGKLNNAFELFDEMRERG 286



 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 42/117 (35%), Positives = 65/117 (55%), Gaps = 7/117 (5%)
 Frame = +1

Query: 1   IRSDG----FQLYEDMKSSGVFPSLHTFNSLIHELCKDPDLAPAFKLF---DEMRLKGVA 159
           +RSD     FQ+Y  M+ +G+   ++ +  LIH LC   D+  A KLF   DEM LK   
Sbjct: 407 VRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSLDEMHLKP-- 464

Query: 160 CNVVTYNTLIGGLCRQKKVKEAMRLMEKMRRDGISPSLITFNLVLDGYCKAGKLPNA 330
            N V YNT+I G C++     A+RL+++M  +G+ P++ ++N  +   CK  K   A
Sbjct: 465 -NDVIYNTMIYGYCKEGSSYRALRLLKEMGENGMVPNVASYNSTIXILCKDEKWTEA 520



 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 32/114 (28%), Positives = 63/114 (55%)
 Frame = +1

Query: 22  LYEDMKSSGVFPSLHTFNSLIHELCKDPDLAPAFKLFDEMRLKGVACNVVTYNTLIGGLC 201
           +  +M++ G+ PS  T+  L+  L +  ++  AF+++  M   G+  ++  Y  LI GLC
Sbjct: 383 MVREMEARGLSPSKVTYTILMDALVRSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLC 442

Query: 202 RQKKVKEAMRLMEKMRRDGISPSLITFNLVLDGYCKAGKLPNALKVLGQLKLSG 363
               +KEA +L + +    + P+ + +N ++ GYCK G    AL++L ++  +G
Sbjct: 443 VVGDMKEASKLFKSLDEMHLKPNDVIYNTMIYGYCKEGSSYRALRLLKEMGENG 496



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 32/110 (29%), Positives = 56/110 (50%)
 Frame = +1

Query: 22  LYEDMKSSGVFPSLHTFNSLIHELCKDPDLAPAFKLFDEMRLKGVACNVVTYNTLIGGLC 201
           L+  MKSSG  PSL T+N LI    +  + A    +  EM  +G++ + VTY  L+  L 
Sbjct: 348 LFNQMKSSGQSPSLATYNILIAGFSEAKNSAGVTDMVREMEARGLSPSKVTYTILMDALV 407

Query: 202 RQKKVKEAMRLMEKMRRDGISPSLITFNLVLDGYCKAGKLPNALKVLGQL 351
           R   +++A ++   M + G+   +  + +++ G C  G +  A K+   L
Sbjct: 408 RSDNIEKAFQIYSSMEKAGLVADIYIYGVLIHGLCVVGDMKEASKLFKSL 457


>ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297332932|gb|EFH63350.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 568

 Score =  147 bits (371), Expect = 9e-34
 Identities = 66/123 (53%), Positives = 93/123 (75%)
 Frame = +1

Query: 1   IRSDGFQLYEDMKSSGVFPSLHTFNSLIHELCKDPDLAPAFKLFDEMRLKGVACNVVTYN 180
           I+  GF++YE M+  GVFP+L+T+N ++++ CKD     AFKLFDEMR +GV+CN+VTYN
Sbjct: 248 IKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYN 307

Query: 181 TLIGGLCRQKKVKEAMRLMEKMRRDGISPSLITFNLVLDGYCKAGKLPNALKVLGQLKLS 360
           TLIGGLCR+ K  EA ++M++M+ DGI+P+LIT+N ++DG+C  GKL  AL +   LK  
Sbjct: 308 TLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSR 367

Query: 361 GYS 369
           G S
Sbjct: 368 GLS 370



 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 39/118 (33%), Positives = 65/118 (55%)
 Frame = +1

Query: 16  FQLYEDMKSSGVFPSLHTFNSLIHELCKDPDLAPAFKLFDEMRLKGVACNVVTYNTLIGG 195
           F L  +++  G  P++  + +LI   CK  ++  A  LF EM   G+  N  TY  LI G
Sbjct: 183 FDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLIHG 242

Query: 196 LCRQKKVKEAMRLMEKMRRDGISPSLITFNLVLDGYCKAGKLPNALKVLGQLKLSGYS 369
           L +    K+   + EKM+ DG+ P+L T+N V++ +CK G+  +A K+  +++  G S
Sbjct: 243 LFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAFKLFDEMRERGVS 300



 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 36/114 (31%), Positives = 67/114 (58%)
 Frame = +1

Query: 22  LYEDMKSSGVFPSLHTFNSLIHELCKDPDLAPAFKLFDEMRLKGVACNVVTYNTLIGGLC 201
           L+ +M   G+  +  T+  LIH L K+      F+++++M+  GV  N+ TYN ++   C
Sbjct: 220 LFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHC 279

Query: 202 RQKKVKEAMRLMEKMRRDGISPSLITFNLVLDGYCKAGKLPNALKVLGQLKLSG 363
           +  + K+A +L ++MR  G+S +++T+N ++ G C+  K   A KV+ Q+K  G
Sbjct: 280 KDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDG 333



 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 33/115 (28%), Positives = 68/115 (59%)
 Frame = +1

Query: 19  QLYEDMKSSGVFPSLHTFNSLIHELCKDPDLAPAFKLFDEMRLKGVACNVVTYNTLIGGL 198
           ++ + MKS G+ P+L T+N+LI   C    L  A  L  +++ +G++ ++VTYN L+ G 
Sbjct: 324 KVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGF 383

Query: 199 CRQKKVKEAMRLMEKMRRDGISPSLITFNLVLDGYCKAGKLPNALKVLGQLKLSG 363
           C++     A +++++M   GI PS IT+ +++D + +   +  A+++   ++  G
Sbjct: 384 CKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELG 438



 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 34/106 (32%), Positives = 62/106 (58%)
 Frame = +1

Query: 22  LYEDMKSSGVFPSLHTFNSLIHELCKDPDLAPAFKLFDEMRLKGVACNVVTYNTLIGGLC 201
           L  D+KS G+ PSL T+N L+   CK  D + A K+  EM  +G+  + +TY  LI    
Sbjct: 360 LCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKITYTILIDTFA 419

Query: 202 RQKKVKEAMRLMEKMRRDGISPSLITFNLVLDGYCKAGKLPNALKV 339
           R   +++A++L   M   G++P + T+++++ G+C  G++  A ++
Sbjct: 420 RMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRL 465



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 32/104 (30%), Positives = 54/104 (51%)
 Frame = +1

Query: 19  QLYEDMKSSGVFPSLHTFNSLIHELCKDPDLAPAFKLFDEMRLKGVACNVVTYNTLIGGL 198
           QL   M+  G+ P +HT++ LIH  C    +  A +LF  M  K +  N V YNT++ G 
Sbjct: 429 QLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGY 488

Query: 199 CRQKKVKEAMRLMEKMRRDGISPSLITFNLVLDGYCKAGKLPNA 330
           C++     A+RL  +M    + P++ ++  +++  CK  K   A
Sbjct: 489 CKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEA 532



 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 32/112 (28%), Positives = 61/112 (54%)
 Frame = +1

Query: 19  QLYEDMKSSGVFPSLHTFNSLIHELCKDPDLAPAFKLFDEMRLKGVACNVVTYNTLIGGL 198
           ++ ++M+  G+ PS  T+  LI    +  ++  A +L   M   G+  +V TY+ LI G 
Sbjct: 394 KVVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGF 453

Query: 199 CRQKKVKEAMRLMEKMRRDGISPSLITFNLVLDGYCKAGKLPNALKVLGQLK 354
           C + ++ EA RL + M    + P+ + +N ++ GYCK G    AL++  +++
Sbjct: 454 CIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREME 505



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 32/95 (33%), Positives = 54/95 (56%)
 Frame = +1

Query: 7   SDGFQLYEDMKSSGVFPSLHTFNSLIHELCKDPDLAPAFKLFDEMRLKGVACNVVTYNTL 186
           ++  +L++ M +  + P+   +N+++   CK+     A +LF EM  K +  NV +Y  +
Sbjct: 460 NEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYM 519

Query: 187 IGGLCRQKKVKEAMRLMEKMRRDGISPSLITFNLV 291
           I  LC+++K KEA  L+EKM   GI PS    NL+
Sbjct: 520 IEVLCKERKSKEAEGLVEKMIDTGIDPSDSILNLI 554



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/102 (24%), Positives = 56/102 (54%)
 Frame = +1

Query: 25  YEDMKSSGVFPSLHTFNSLIHELCKDPDLAPAFKLFDEMRLKGVACNVVTYNTLIGGLCR 204
           + +M   G  P  + FN+L+  +         ++ F+E ++K V  +V ++  +I G C 
Sbjct: 117 FNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNESKIK-VDLDVYSFGIVIKGCCE 175

Query: 205 QKKVKEAMRLMEKMRRDGISPSLITFNLVLDGYCKAGKLPNA 330
             +++++  L+ ++R  G SP+++ +  ++DG CK G++  A
Sbjct: 176 AGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKA 217


>ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297318454|gb|EFH48876.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 584

 Score =  147 bits (370), Expect = 1e-33
 Identities = 66/123 (53%), Positives = 92/123 (74%)
 Frame = +1

Query: 1   IRSDGFQLYEDMKSSGVFPSLHTFNSLIHELCKDPDLAPAFKLFDEMRLKGVACNVVTYN 180
           I+  GF++YE M+  GVFP+LHT+N ++++LCKD     AFK+FDEMR +GV+CN+VTYN
Sbjct: 248 IKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYN 307

Query: 181 TLIGGLCRQKKVKEAMRLMEKMRRDGISPSLITFNLVLDGYCKAGKLPNALKVLGQLKLS 360
           TLIGGLCR+ K  EA  +M++M+ DGI+P+LIT+N ++DG+C   KL  AL +   LK  
Sbjct: 308 TLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSR 367

Query: 361 GYS 369
           G S
Sbjct: 368 GLS 370



 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 32/115 (27%), Positives = 69/115 (60%)
 Frame = +1

Query: 19  QLYEDMKSSGVFPSLHTFNSLIHELCKDPDLAPAFKLFDEMRLKGVACNVVTYNTLIGGL 198
           ++ + MKS G+ P+L T+N+LI   C    L  A  L  +++ +G++ ++VTYN L+ G 
Sbjct: 324 EVMDQMKSDGINPNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGF 383

Query: 199 CRQKKVKEAMRLMEKMRRDGISPSLITFNLVLDGYCKAGKLPNALKVLGQLKLSG 363
           C++     A +++++M   GI PS +T+ +++D + ++  +  A+++   ++  G
Sbjct: 384 CKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELG 438



 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 39/118 (33%), Positives = 63/118 (53%)
 Frame = +1

Query: 16  FQLYEDMKSSGVFPSLHTFNSLIHELCKDPDLAPAFKLFDEMRLKGVACNVVTYNTLIGG 195
           F L  +++  G  P++  + +LI   CK  ++  A  LF EM   G+  N  TY  LI G
Sbjct: 183 FDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHG 242

Query: 196 LCRQKKVKEAMRLMEKMRRDGISPSLITFNLVLDGYCKAGKLPNALKVLGQLKLSGYS 369
           L +    K+   + EKM+  G+ P+L T+N V++  CK G+  +A KV  +++  G S
Sbjct: 243 LFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVFDEMRERGVS 300



 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 35/106 (33%), Positives = 62/106 (58%)
 Frame = +1

Query: 22  LYEDMKSSGVFPSLHTFNSLIHELCKDPDLAPAFKLFDEMRLKGVACNVVTYNTLIGGLC 201
           L  D+KS G+ PSL T+N L+   CK  D + A K+  EM  +G+  + VTY  LI    
Sbjct: 360 LCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTYTILIDTFA 419

Query: 202 RQKKVKEAMRLMEKMRRDGISPSLITFNLVLDGYCKAGKLPNALKV 339
           R   +++A++L   M   G++P + T+++++ G+C  G++  A ++
Sbjct: 420 RSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRL 465



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 32/112 (28%), Positives = 60/112 (53%)
 Frame = +1

Query: 19  QLYEDMKSSGVFPSLHTFNSLIHELCKDPDLAPAFKLFDEMRLKGVACNVVTYNTLIGGL 198
           ++ ++M+  G+ PS  T+  LI    +  ++  A +L   M   G+  +V TY+ LI G 
Sbjct: 394 KVVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGF 453

Query: 199 CRQKKVKEAMRLMEKMRRDGISPSLITFNLVLDGYCKAGKLPNALKVLGQLK 354
           C + ++ EA RL + M      P+ + +N ++ GYCK G    AL++  +++
Sbjct: 454 CIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREME 505



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 34/115 (29%), Positives = 59/115 (51%)
 Frame = +1

Query: 19  QLYEDMKSSGVFPSLHTFNSLIHELCKDPDLAPAFKLFDEMRLKGVACNVVTYNTLIGGL 198
           QL   M+  G+ P +HT++ LIH  C    +  A +LF  M  K    N V YNT++ G 
Sbjct: 429 QLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVEKKFEPNEVIYNTMVLGY 488

Query: 199 CRQKKVKEAMRLMEKMRRDGISPSLITFNLVLDGYCKAGKLPNALKVLGQLKLSG 363
           C++     A+RL  +M    + P++ ++  +++  CK  K   A  ++ ++  SG
Sbjct: 489 CKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKEAEGLVEKMIDSG 543



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 32/95 (33%), Positives = 52/95 (54%)
 Frame = +1

Query: 7   SDGFQLYEDMKSSGVFPSLHTFNSLIHELCKDPDLAPAFKLFDEMRLKGVACNVVTYNTL 186
           ++  +L++ M      P+   +N+++   CK+     A +LF EM  K +  NV +Y  +
Sbjct: 460 NEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYM 519

Query: 187 IGGLCRQKKVKEAMRLMEKMRRDGISPSLITFNLV 291
           I  LC+++K KEA  L+EKM   GI PS    NL+
Sbjct: 520 IEVLCKERKSKEAEGLVEKMIDSGIGPSDSILNLI 554


>ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At4g11690 gi|4539460|emb|CAB39940.1| putative protein
           [Arabidopsis thaliana] gi|7267869|emb|CAB78212.1|
           putative protein [Arabidopsis thaliana]
           gi|91806660|gb|ABE66057.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
           gi|332657639|gb|AEE83039.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 566

 Score =  145 bits (367), Expect = 3e-33
 Identities = 63/123 (51%), Positives = 95/123 (77%)
 Frame = +1

Query: 1   IRSDGFQLYEDMKSSGVFPSLHTFNSLIHELCKDPDLAPAFKLFDEMRLKGVACNVVTYN 180
           ++  GF++YE M+  GVFP+L+T+N ++++LCKD     AF++FDEMR +GV+CN+VTYN
Sbjct: 248 VKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVSCNIVTYN 307

Query: 181 TLIGGLCRQKKVKEAMRLMEKMRRDGISPSLITFNLVLDGYCKAGKLPNALKVLGQLKLS 360
           TLIGGLCR+ K+ EA +++++M+ DGI+P+LIT+N ++DG+C  GKL  AL +   LK  
Sbjct: 308 TLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSR 367

Query: 361 GYS 369
           G S
Sbjct: 368 GLS 370



 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 36/114 (31%), Positives = 69/114 (60%)
 Frame = +1

Query: 19  QLYEDMKSSGVFPSLHTFNSLIHELCKDPDLAPAFKLFDEMRLKGVACNVVTYNTLIGGL 198
           ++ + MKS G+ P+L T+N+LI   C    L  A  L  +++ +G++ ++VTYN L+ G 
Sbjct: 324 KVVDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGF 383

Query: 199 CRQKKVKEAMRLMEKMRRDGISPSLITFNLVLDGYCKAGKLPNALKVLGQLKLS 360
           CR+     A +++++M   GI PS +T+ +++D + ++  +  A+    QL+LS
Sbjct: 384 CRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAI----QLRLS 433



 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 39/118 (33%), Positives = 63/118 (53%)
 Frame = +1

Query: 16  FQLYEDMKSSGVFPSLHTFNSLIHELCKDPDLAPAFKLFDEMRLKGVACNVVTYNTLIGG 195
           F L  ++   G  P++  + +LI   CK  ++  A  LF EM   G+  N  TY  LI G
Sbjct: 183 FDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLING 242

Query: 196 LCRQKKVKEAMRLMEKMRRDGISPSLITFNLVLDGYCKAGKLPNALKVLGQLKLSGYS 369
           L +    K+   + EKM+ DG+ P+L T+N V++  CK G+  +A +V  +++  G S
Sbjct: 243 LFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGVS 300



 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 34/106 (32%), Positives = 61/106 (57%)
 Frame = +1

Query: 22  LYEDMKSSGVFPSLHTFNSLIHELCKDPDLAPAFKLFDEMRLKGVACNVVTYNTLIGGLC 201
           L  D+KS G+ PSL T+N L+   C+  D + A K+  EM  +G+  + VTY  LI    
Sbjct: 360 LCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTYTILIDTFA 419

Query: 202 RQKKVKEAMRLMEKMRRDGISPSLITFNLVLDGYCKAGKLPNALKV 339
           R   +++A++L   M   G+ P + T+++++ G+C  G++  A ++
Sbjct: 420 RSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRL 465



 Score = 65.9 bits (159), Expect = 3e-09
 Identities = 34/115 (29%), Positives = 63/115 (54%)
 Frame = +1

Query: 19  QLYEDMKSSGVFPSLHTFNSLIHELCKDPDLAPAFKLFDEMRLKGVACNVVTYNTLIGGL 198
           QL   M+  G+ P +HT++ LIH  C    +  A +LF  M  K    N V YNT+I G 
Sbjct: 429 QLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGY 488

Query: 199 CRQKKVKEAMRLMEKMRRDGISPSLITFNLVLDGYCKAGKLPNALKVLGQLKLSG 363
           C++     A++L+++M    ++P++ ++  +++  CK  K   A +++ ++  SG
Sbjct: 489 CKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKEAERLVEKMIDSG 543



 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 35/116 (30%), Positives = 62/116 (53%)
 Frame = +1

Query: 7   SDGFQLYEDMKSSGVFPSLHTFNSLIHELCKDPDLAPAFKLFDEMRLKGVACNVVTYNTL 186
           S   ++ ++M+  G+ PS  T+  LI    +  ++  A +L   M   G+  +V TY+ L
Sbjct: 390 SGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVL 449

Query: 187 IGGLCRQKKVKEAMRLMEKMRRDGISPSLITFNLVLDGYCKAGKLPNALKVLGQLK 354
           I G C + ++ EA RL + M      P+ + +N ++ GYCK G    ALK+L +++
Sbjct: 450 IHGFCIKGQMNEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEME 505



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 34/95 (35%), Positives = 53/95 (55%)
 Frame = +1

Query: 7   SDGFQLYEDMKSSGVFPSLHTFNSLIHELCKDPDLAPAFKLFDEMRLKGVACNVVTYNTL 186
           ++  +L++ M      P+   +N++I   CK+     A KL  EM  K +A NV +Y  +
Sbjct: 460 NEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYM 519

Query: 187 IGGLCRQKKVKEAMRLMEKMRRDGISPSLITFNLV 291
           I  LC+++K KEA RL+EKM   GI PS    +L+
Sbjct: 520 IEVLCKERKSKEAERLVEKMIDSGIDPSTSILSLI 554