BLASTX nr result

ID: Dioscorea21_contig00023612 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00023612
         (744 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAO23078.1| polyprotein [Glycine max]                              192   8e-47
emb|CAN73467.1| hypothetical protein VITISV_043900 [Vitis vinifera]   187   3e-45
gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptas...   182   5e-44
emb|CAN64437.1| hypothetical protein VITISV_011228 [Vitis vinifera]   181   2e-43
emb|CAN60449.1| hypothetical protein VITISV_036155 [Vitis vinifera]   180   3e-43

>gb|AAO23078.1| polyprotein [Glycine max]
          Length = 1552

 Score =  192 bits (487), Expect = 8e-47
 Identities = 103/247 (41%), Positives = 146/247 (59%)
 Frame = -1

Query: 741  QSLRALMHQTIQTPEQQRWLCKLVGYDFDIEHKPGILNGPADALSRVSCYALFSESRPQP 562
            +SL++LM Q++QTPEQQ WL K +GYDF IE+KPG  N  ADALSR+   A    S P  
Sbjct: 961  RSLKSLMDQSLQTPEQQAWLHKFLGYDFKIEYKPGKDNQAADALSRMFMLAW---SEPHS 1017

Query: 561  VMGEAIRRAYNNHPETKALLASVTQDPGQYPNFLMRDGLLLFKGRIWIPSNSELQPLIIA 382
            +  E +R    + P  K L+ +  Q      ++ +R+GLL +K R+ IP+  E+   I+ 
Sbjct: 1018 IFLEELRARLISDPHLKQLMETYKQG-ADASHYTVREGLLYWKDRVVIPAEEEIVNKILQ 1076

Query: 381  EFHNTPTGGHAGVQRTLARVASMFYWPELRKTVRDMVSKCGECQAVKPLNRAXXXXXXXX 202
            E+H++P GGHAG+ RTLAR+ + FYWP++++ V+  + KC  CQ  K  N          
Sbjct: 1077 EYHSSPIGGHAGITRTLARLKAQFYWPKMQEDVKAYIQKCLICQQAKSNNTLPAGLLQPL 1136

Query: 201  XXXXXXGHSVSMDFITGLPPSAGKTAIMVVVDRLSKQGHFSALGPSFTALQVAEQMVRDV 22
                     V+MDFITGLP S G + IMVV+DRL+K  HF  L   + +  VAE  +  +
Sbjct: 1137 PIPQQVWEDVAMDFITGLPNSFGLSVIMVVIDRLTKYAHFIPLKADYNSKVVAEAFMSHI 1196

Query: 21   IKLHGPP 1
            +KLHG P
Sbjct: 1197 VKLHGIP 1203


>emb|CAN73467.1| hypothetical protein VITISV_043900 [Vitis vinifera]
          Length = 1593

 Score =  187 bits (474), Expect = 3e-45
 Identities = 103/250 (41%), Positives = 144/250 (57%), Gaps = 3/250 (1%)
 Frame = -1

Query: 741  QSLRALMHQTIQTPEQQRWLCKLVGYDFDIEHKPGILNGPADALSR---VSCYALFSESR 571
            +SL+ L+ Q I TPEQQ+W+ KLVGYD++I +KPG  N  ADALSR     C  +F    
Sbjct: 797  RSLKYLLEQRIITPEQQKWMSKLVGYDYEIVYKPGKTNQAADALSRNMTSPCLNVFFV-- 854

Query: 570  PQPVMGEAIRRAYNNHPETKALLASVTQDPGQYPNFLMRDGLLLFKGRIWIPSNSELQPL 391
            PQ  + + IR   N++P  + +    T+ P Q   +  R+GL+ +  RI +P  S L   
Sbjct: 855  PQVQVWDEIRHEANSNPYMQRIGQLATKQPRQ--PYQWRNGLVCYNNRIVVPPGSPLIHC 912

Query: 390  IIAEFHNTPTGGHAGVQRTLARVASMFYWPELRKTVRDMVSKCGECQAVKPLNRAXXXXX 211
            ++ EFH+TP GGH+ + RT  R++  FYWP +R++V   V+ C  CQ  K    +     
Sbjct: 913  LLREFHDTPMGGHSRILRTYKRLSQQFYWPSMRRSVHQYVAACDVCQKAKAETMSPAGLL 972

Query: 210  XXXXXXXXXGHSVSMDFITGLPPSAGKTAIMVVVDRLSKQGHFSALGPSFTALQVAEQMV 31
                        ++MDFI GLP S GKT+IMVVVDRLSK  HF A+   +TA  +A + V
Sbjct: 973  QPLPIPCQVWDDITMDFIDGLPRSDGKTSIMVVVDRLSKSAHFIAIAHPYTAKTLANKFV 1032

Query: 30   RDVIKLHGPP 1
              V+KLHG P
Sbjct: 1033 EGVVKLHGMP 1042


>gb|ABN06064.1| RNA-directed DNA polymerase (Reverse transcriptase); Chromo; Zinc
            finger, CCHC-type; Peptidase aspartic, active site;
            Polynucleotidyl transferase, Ribonuclease H fold
            [Medicago truncatula]
          Length = 1297

 Score =  182 bits (463), Expect = 5e-44
 Identities = 96/252 (38%), Positives = 144/252 (57%), Gaps = 5/252 (1%)
 Frame = -1

Query: 741  QSLRALMHQTIQTPEQQRWLCKLVGYDFDIEHKPGILNGPADALSRVS-----CYALFSE 577
            +SL+ L+ Q + T EQQ W  KL+GYDF+I +KPG LN  ADALSRV      C  + S 
Sbjct: 746  KSLKQLLQQRVVTAEQQNWAAKLLGYDFEIIYKPGKLNKGADALSRVREDGELCQGITSV 805

Query: 576  SRPQPVMGEAIRRAYNNHPETKALLASVTQDPGQYPNFLMRDGLLLFKGRIWIPSNSELQ 397
                  +   +R   +   + + ++  + +D    P ++++ G+LL++GR+ + S S + 
Sbjct: 806  QWKDEKL---LREELSRDSQLQKIIGDLQRDASSRPGYMLKQGVLLYEGRLVVSSKSVMI 862

Query: 396  PLIIAEFHNTPTGGHAGVQRTLARVASMFYWPELRKTVRDMVSKCGECQAVKPLNRAXXX 217
            P ++AEFH+TP GGH+G  RT  R+A+  YW  ++ TV++ V  C  CQ  K L  +   
Sbjct: 863  PTLLAEFHSTPQGGHSGFYRTYRRLAANVYWVGMKNTVQEYVRSCDTCQRQKYLASSPGG 922

Query: 216  XXXXXXXXXXXGHSVSMDFITGLPPSAGKTAIMVVVDRLSKQGHFSALGPSFTALQVAEQ 37
                          +SMDFI GLP S G  A++VVVDRLSK  HF  L   +TA  +A+ 
Sbjct: 923  LLQPLPVPDRIWEDLSMDFIMGLPKSKGYEAVLVVVDRLSKYSHFILLKHPYTAKVIADV 982

Query: 36   MVRDVIKLHGPP 1
             +R+V++LHG P
Sbjct: 983  FIREVVRLHGIP 994


>emb|CAN64437.1| hypothetical protein VITISV_011228 [Vitis vinifera]
          Length = 623

 Score =  181 bits (458), Expect = 2e-43
 Identities = 102/252 (40%), Positives = 138/252 (54%), Gaps = 5/252 (1%)
 Frame = -1

Query: 741 QSLRALMHQTIQTPEQQRWLCKLVGYDFDIEHKPGILNGPADALSRV----SCYALFSES 574
           +SL+ L+ Q + TPEQQ+W+ KL+GYD++I +KP   N  ADALSRV    +  ALF   
Sbjct: 77  RSLKYLLEQRVVTPEQQKWVAKLLGYDYEILYKPSCENSTADALSRVPGSPTLNALFVS- 135

Query: 573 RPQPVMGEAIRRAYNNHPETKALLASVTQDPG-QYPNFLMRDGLLLFKGRIWIPSNSELQ 397
             Q  + E I+    +      +       PG  Y N   R GL  +K R+ +P  S + 
Sbjct: 136 --QAKIWEEIKTVAADDAYMARISKLAATKPGLPYTN---RQGLTFYKNRVVVPPQSHIP 190

Query: 396 PLIIAEFHNTPTGGHAGVQRTLARVASMFYWPELRKTVRDMVSKCGECQAVKPLNRAXXX 217
             ++ EFH++P GGH+GV RT  R+A  FYWP + + V + +S C  CQ  K    +   
Sbjct: 191 NQLLREFHDSPLGGHSGVLRTYKRIAQQFYWPSMYRMVNEYISSCDVCQRAKASTLSSTG 250

Query: 216 XXXXXXXXXXXGHSVSMDFITGLPPSAGKTAIMVVVDRLSKQGHFSALGPSFTALQVAEQ 37
                         ++MDFI GLPPS GK  I+VVVDRLSK  HF AL   F+A  VAE+
Sbjct: 251 LLQPLPIPCQVWDDITMDFIEGLPPSQGKNTILVVVDRLSKSAHFLALTHPFSAKMVAEK 310

Query: 36  MVRDVIKLHGPP 1
            V  V+KLHG P
Sbjct: 311 FVDGVVKLHGMP 322


>emb|CAN60449.1| hypothetical protein VITISV_036155 [Vitis vinifera]
          Length = 647

 Score =  180 bits (456), Expect = 3e-43
 Identities = 102/249 (40%), Positives = 136/249 (54%), Gaps = 2/249 (0%)
 Frame = -1

Query: 741 QSLRALMHQTIQTPEQQRWLCKLVGYDFDIEHKPGILNGPADALSRVSCYALFSESR-PQ 565
           +SL+ L+ Q + T EQQ+W+ KL+GYD++I +KPG  N   DALSRV     F+     Q
Sbjct: 85  RSLKYLLEQRVVTLEQQKWVAKLLGYDYEILYKPGRENSAVDALSRVPSSLTFNALFVSQ 144

Query: 564 PVMGEAIRRAYNNHPETKALLASVTQDPG-QYPNFLMRDGLLLFKGRIWIPSNSELQPLI 388
             + E I+ A  +      +       PG  Y N   R GL  +K R+ +P  S +   +
Sbjct: 145 AKIWEEIKTAAADDAYMTCISKLAATKPGLPYTN---RQGLTFYKNRVVVPPQSHIPNQL 201

Query: 387 IAEFHNTPTGGHAGVQRTLARVASMFYWPELRKTVRDMVSKCGECQAVKPLNRAXXXXXX 208
           + EFH++P GGH+GV RT  R+A  FYWP + + V + VS C  CQ  K    +      
Sbjct: 202 LREFHDSPLGGHSGVLRTYKRIAQQFYWPSMYRMVNEYVSSCDVCQRAKASTLSPAGLLQ 261

Query: 207 XXXXXXXXGHSVSMDFITGLPPSAGKTAIMVVVDRLSKQGHFSALGPSFTALQVAEQMVR 28
                      ++MDFI GLPPS GK  I+VVVDRLSK  HF AL   F+A  VAE+ V 
Sbjct: 262 PLPIPCQVWDDITMDFIEGLPPSQGKNTILVVVDRLSKSAHFLALTHPFSAKMVAEKFVD 321

Query: 27  DVIKLHGPP 1
            VIKLHG P
Sbjct: 322 GVIKLHGMP 330


Top