BLASTX nr result

ID: Dioscorea21_contig00023572 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00023572
         (270 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK25132.1| unknown [Picea sitchensis]                              58   9e-07
ref|XP_002461761.1| hypothetical protein SORBIDRAFT_02g007630 [S...    56   3e-06
ref|XP_004149209.1| PREDICTED: probable cytosolic iron-sulfur pr...    55   6e-06
gb|EKC28417.1| Putative cytosolic iron-sulfur protein assembly p...    55   6e-06
gb|EKC22262.1| Putative cytosolic iron-sulfur protein assembly p...    55   6e-06

>gb|ABK25132.1| unknown [Picea sitchensis]
          Length = 368

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 23/36 (63%), Positives = 31/36 (86%)
 Frame = +3

Query: 3   HAMDVNSVLWNPKDPQVLASASDDGSVKIWELVDVS 110
           H+MDVNSV W+P +PQ+LASASDDG +KIWE+  ++
Sbjct: 327 HSMDVNSVQWHPSEPQLLASASDDGRIKIWEVTRIN 362


>ref|XP_002461761.1| hypothetical protein SORBIDRAFT_02g007630 [Sorghum bicolor]
           gi|241925138|gb|EER98282.1| hypothetical protein
           SORBIDRAFT_02g007630 [Sorghum bicolor]
          Length = 350

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 23/32 (71%), Positives = 28/32 (87%)
 Frame = +3

Query: 3   HAMDVNSVLWNPKDPQVLASASDDGSVKIWEL 98
           H MD+NSV W P+DP++LASASDDG VK+WEL
Sbjct: 313 HVMDINSVRWCPQDPRLLASASDDGMVKLWEL 344


>ref|XP_004149209.1| PREDICTED: probable cytosolic iron-sulfur protein assembly
           protein-like [Cucumis sativus]
           gi|449500925|ref|XP_004161232.1| PREDICTED: probable
           cytosolic iron-sulfur protein assembly protein-like
           [Cucumis sativus]
          Length = 350

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 23/36 (63%), Positives = 31/36 (86%)
 Frame = +3

Query: 3   HAMDVNSVLWNPKDPQVLASASDDGSVKIWELVDVS 110
           H+MDVNSV W+P +  +LASASDDG+++IWELV +S
Sbjct: 315 HSMDVNSVQWSPGEKVLLASASDDGTIRIWELVPIS 350


>gb|EKC28417.1| Putative cytosolic iron-sulfur protein assembly protein
           [Crassostrea gigas]
          Length = 325

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 22/33 (66%), Positives = 28/33 (84%)
 Frame = +3

Query: 3   HAMDVNSVLWNPKDPQVLASASDDGSVKIWELV 101
           H+ DVNSV WNPK+P +LAS SDDG VK+W++V
Sbjct: 291 HSQDVNSVAWNPKEPGLLASGSDDGDVKLWKVV 323


>gb|EKC22262.1| Putative cytosolic iron-sulfur protein assembly protein
           [Crassostrea gigas]
          Length = 334

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 22/33 (66%), Positives = 28/33 (84%)
 Frame = +3

Query: 3   HAMDVNSVLWNPKDPQVLASASDDGSVKIWELV 101
           H+ DVNSV WNPK+P +LAS SDDG VK+W++V
Sbjct: 300 HSQDVNSVAWNPKEPGLLASGSDDGDVKLWKVV 332


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