BLASTX nr result
ID: Dioscorea21_contig00023558
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Dioscorea21_contig00023558
(1495 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002267498.2| PREDICTED: putative U-box domain-containing ... 435 e-119
ref|XP_002888693.1| hypothetical protein ARALYDRAFT_339138 [Arab... 431 e-118
ref|XP_002311419.1| predicted protein [Populus trichocarpa] gi|2... 428 e-117
ref|NP_177060.3| putative U-box domain-containing protein 42 [Ar... 427 e-117
ref|NP_001154460.1| putative U-box domain-containing protein 42 ... 411 e-112
>ref|XP_002267498.2| PREDICTED: putative U-box domain-containing protein 42-like [Vitis
vinifera]
Length = 1055
Score = 435 bits (1119), Expect = e-119
Identities = 232/488 (47%), Positives = 340/488 (69%), Gaps = 9/488 (1%)
Frame = +3
Query: 3 RNAAFKALLRLSSHHSNGTTLIEAGIVPIMVDEIFI-RKIYDEPVDSKEESAAVIANILE 179
+ AAFKAL ++SS+H NG L+EAGIV I+V+E+ RKI++E ++S +E+AA++ N+LE
Sbjct: 570 KKAAFKALEQISSYHPNGKILVEAGIVQIVVEEMLTPRKIHNETMNSIKEAAAILGNLLE 629
Query: 180 SGADPRFIQVYKHGHTMASDYVIYNIVHMLRYSNTDELNKNLIRILLSLTKLPKPFAAIV 359
SG + +QV HGHTM SDY++Y+I+HML+ S D+LN NLIRILL L K PK A IV
Sbjct: 630 SGIEFENLQVNTHGHTMGSDYIVYSIIHMLKNSTPDKLNTNLIRILLCLAKSPKSNATIV 689
Query: 360 SVMKETEASYNVIEFLNSKNEDLVVNSGKLLIKLITHMGHTIAEALCKTREQPGSLIKKL 539
SV++ETEASY +IE +N+ +E+L + S KLLI L ++GHT AE LCKTR QP SL++
Sbjct: 690 SVVRETEASYTLIELINNPHEELGIASMKLLITLSPYLGHTFAERLCKTRGQPQSLLQSP 749
Query: 540 -ETDQVTKKHAISVNLVAKXXXXXXXXXXXXXXSGTXXXXXXXXXXFQRSETRIGRHERH 716
T+Q+T+K A+S N +A + + QRS TR R+
Sbjct: 750 GGTNQITQKQAVSANFLADLPHQNLRLNLALLSNDSVPMILQSIHQMQRSGTRTSRYASA 809
Query: 717 YIEGLVGILLRFTTTLYDHEILQMAKEQNLTTVFTELLVRKSGSDEVQRMSAIGLENLSS 896
Y+EGLVGI++RFTTTL++ ++L +A+ N T+V TELL K+ SD+VQR+SAIGL+NLSS
Sbjct: 810 YLEGLVGIIVRFTTTLFEPQMLFLARNYNFTSVLTELLT-KTSSDKVQRLSAIGLKNLSS 868
Query: 897 ETVNLSKPAIEIRGSTKMAKF--LPRVFSIGSRRESRVKPCPVHRGACSPSTTFCLLESN 1070
E+VNLSKP +I+ TK KF LPR S GS + +++ CPVHRGACS TFCL+++
Sbjct: 869 ESVNLSKPP-QIK-RTKFLKFFKLPRSLSAGSSKSKKIQVCPVHRGACSSQNTFCLVDAK 926
Query: 1071 ALGKLVRCLQHENVKVVEAALSAICTLLDEKVDVERSLEVLGEMELVEQVVGVLRKHKQD 1250
A+ +L+ CL+HEN +V+EAALSA+CTLLD+KVDV++S+ +L ++ ++ V+ V+++H+++
Sbjct: 927 AVERLLACLEHENAEVIEAALSALCTLLDDKVDVDKSVSLLSGVDCIQHVLNVVKEHREE 986
Query: 1251 GIWQKAFWVIERFVVKKGEE----LYGDEQISEVLQDAYQHGNSRSRQVAQNMLSHLKK- 1415
G+ +K+ WVIERF++K G+ + D + L A+ HG+ ++Q+A +L HL +
Sbjct: 987 GLREKSLWVIERFLMKGGDRSASYISQDRSLPATLVSAFHHGDGSTKQMAAKILRHLNQM 1046
Query: 1416 SNLPRNFT 1439
+ NFT
Sbjct: 1047 PKVTTNFT 1054
>ref|XP_002888693.1| hypothetical protein ARALYDRAFT_339138 [Arabidopsis lyrata subsp.
lyrata] gi|297334534|gb|EFH64952.1| hypothetical protein
ARALYDRAFT_339138 [Arabidopsis lyrata subsp. lyrata]
Length = 1032
Score = 431 bits (1107), Expect = e-118
Identities = 221/480 (46%), Positives = 332/480 (69%), Gaps = 9/480 (1%)
Frame = +3
Query: 3 RNAAFKALLRLSSHHSNGTTLIEAGIVPIMVDEIFIRKIYDEPVDSKEESAAVIANILES 182
R AAFKAL +S +H N L+E GI+ IMV+E+F ++++ + ++S+ E+A ++ANILES
Sbjct: 549 RRAAFKALAHISLYHPNNQILVEVGIIKIMVEEMFTKRVFSDLMNSRNEAATILANILES 608
Query: 183 GADPRFIQVYKHGHTMASDYVIYNIVHMLRYSNTDELNKNLIRILLSLTKLPKPFAAIVS 362
G + +V HGHT+ SDY +YNI+ ML+ S+ D+LN NLIRILLSL+K P+ A IVS
Sbjct: 609 GLEHETFEVNTHGHTLGSDYFVYNIIQMLKNSSPDDLNINLIRILLSLSKSPRAMATIVS 668
Query: 363 VMKETEASYNVIEFLNSKNEDLVVNSGKLLIKLITHMGHTIAEALCKTREQPGSLIK-KL 539
V+KET+AS+ +IE +N+ +E+L V + KLLI L ++GHT++E LCKTR QP +LI+ +
Sbjct: 669 VIKETDASFAMIELINNPHEELGVGALKLLIALTPYIGHTLSERLCKTRGQPENLIQCPV 728
Query: 540 ETDQVTKKHAISVNLVAKXXXXXXXXXXXXXXSGTXXXXXXXXXXFQRSETRIGRHERHY 719
E +Q+T+KHA+S L+AK QRS TR R+ +
Sbjct: 729 EANQITEKHAVSAKLLAKLPHQNLTLNLALVNESIVSEILHAIHLIQRSGTRTSRYATDF 788
Query: 720 IEGLVGILLRFTTTLYDHEILQMAKEQNLTTVFTELLVRKSGSDEVQRMSAIGLENLSSE 899
+EGLVGIL+RFTTTLY+ +++ +A+ +LT+VF +LL+ K+ SDEVQR+SA GLENLSS
Sbjct: 789 LEGLVGILVRFTTTLYEPQMMYLARNHDLTSVFVDLLM-KTSSDEVQRLSATGLENLSST 847
Query: 900 TVNLSKP----AIEIRGSTKMAKFLPRVFSIGSRRESRVKPCPVHRGACSPSTTFCLLES 1067
T+ LS+P + + GS M PR FS+ S ++ +++ C +HRG CS TFCL+E+
Sbjct: 848 TMTLSRPPQPRSTKFMGSLSM----PRSFSLRSSKKKQIEICAIHRGVCSAKNTFCLVEA 903
Query: 1068 NALGKLVRCLQHENVKVVEAALSAICTLLDEKVDVERSLEVLGEMELVEQVVGVLRKHKQ 1247
NA+ KL+ CLQ + V+VVE+AL+AICTLLD+KVDVE+SL +L EM V+ ++ +++HK+
Sbjct: 904 NAITKLLACLQSDKVEVVESALAAICTLLDDKVDVEKSLSMLSEMNAVQLILNAVKEHKK 963
Query: 1248 DGIWQKAFWVIERFVVKKGE----ELYGDEQISEVLQDAYQHGNSRSRQVAQNMLSHLKK 1415
+ + QKAFW+I++F+++ G+ E+ D +S +L A+ G+ +RQ+A+N+L L K
Sbjct: 964 ESLLQKAFWMIDKFIIRGGDKYASEISQDRMLSGMLVSAFHRGDGNTRQMAENILRRLDK 1023
>ref|XP_002311419.1| predicted protein [Populus trichocarpa] gi|222851239|gb|EEE88786.1|
predicted protein [Populus trichocarpa]
Length = 949
Score = 428 bits (1101), Expect = e-117
Identities = 228/481 (47%), Positives = 328/481 (68%), Gaps = 10/481 (2%)
Frame = +3
Query: 3 RNAAFKALLRLSSHHSNGTTLIEAGIVPIMVDEIFIRKIYDEPVDSKEESAAVIANILES 182
R AAFKAL +++S H N L ++GI+ IMV+E+F R+IY EP++SK E+AA++ANILE+
Sbjct: 464 RTAAFKALAKIASCHPNAKILAKSGIIQIMVEEMFTRRIYGEPINSKSEAAAMLANILEA 523
Query: 183 GADPRFIQVYKHGHTMASDYVIYNIVHMLRYSNTDELNKNLIRILLSLTKLPKPFAAIVS 362
G D +QV HGH +ASDYV+YN + M+++S D+LN NLIRILL L K P+ + IVS
Sbjct: 524 GLDLENLQVNSHGHRLASDYVLYNFIEMIKHSTPDDLNINLIRILLCLAKSPRSMSTIVS 583
Query: 363 VMKETEASYNVIEFLNSKNEDLVVNSGKLLIKLITHMGHTIAEALCKTREQPGSLI-KKL 539
++KE+EASY ++E LN+ +E+L + + KLLI LI +MGH I E LCKT QP +LI +
Sbjct: 584 MVKESEASYTLVELLNNPHEELGIAAIKLLIVLIPYMGHIIVERLCKTAGQPENLILGRN 643
Query: 540 ETDQVTKKHAISVNLVAKXXXXXXXXXXXXXXSGTXXXXXXXXXXFQRSETRIGRHERHY 719
ET ++T+K A+S +AK T Q + R GR+ Y
Sbjct: 644 ETTRITQKQAVSSTFLAKLPHQSLTLNLALLRKNTVPAILQQINQIQGTCIRTGRYVIPY 703
Query: 720 IEGLVGILLRFTTTLYDHEILQMAKEQNLTTVFTELLVRKSGSDEVQRMSAIGLENLSSE 899
+EGLV IL+RFTTTLY+ ++L +A++ N T+VFTELL+ K+ SDEVQR+SAIGLENLS E
Sbjct: 704 LEGLVSILVRFTTTLYEPQMLFLARDYNFTSVFTELLM-KTSSDEVQRLSAIGLENLSLE 762
Query: 900 TVNLSKPAIEIRGSTKMAKFL-----PRVFSIGSRRESRVKPCPVHRGACSPSTTFCLLE 1064
++NLSKP K KFL P+ S S ++ ++ CPVHRGACS TFCL++
Sbjct: 763 SINLSKPP-----QIKKTKFLKLFYPPKFLSSISSKKRQLPLCPVHRGACSSQNTFCLVD 817
Query: 1065 SNALGKLVRCLQHENVKVVEAALSAICTLLDEKVDVERSLEVLGEMELVEQVVGVLRKHK 1244
+ A+ +L+ CL HENV+VVEAALSA+CTLLD++VDVE S+ +L E+ ++ V+ +++HK
Sbjct: 818 AKAVERLLACLDHENVEVVEAALSAVCTLLDDEVDVEMSVGMLCEVNAIQLVLNAVKEHK 877
Query: 1245 QDGIWQKAFWVIERFVVKKG----EELYGDEQISEVLQDAYQHGNSRSRQVAQNMLSHLK 1412
+G+W+K+FW+I+RF+VK G ++ D + L +A+ HG+ +RQ+A+ +L HL
Sbjct: 878 GEGLWKKSFWLIDRFLVKGGSRCASDISQDRLLPATLVNAFHHGDIDTRQMAERILRHLN 937
Query: 1413 K 1415
K
Sbjct: 938 K 938
>ref|NP_177060.3| putative U-box domain-containing protein 42 [Arabidopsis thaliana]
gi|75333632|sp|Q9CAA7.1|PUB42_ARATH RecName:
Full=Putative U-box domain-containing protein 42;
AltName: Full=Plant U-box protein 42
gi|12323215|gb|AAG51587.1|AC011665_8 hypothetical protein
[Arabidopsis thaliana] gi|332196744|gb|AEE34865.1|
putative U-box domain-containing protein 42 [Arabidopsis
thaliana]
Length = 1033
Score = 427 bits (1098), Expect = e-117
Identities = 218/480 (45%), Positives = 332/480 (69%), Gaps = 9/480 (1%)
Frame = +3
Query: 3 RNAAFKALLRLSSHHSNGTTLIEAGIVPIMVDEIFIRKIYDEPVDSKEESAAVIANILES 182
R AAFKAL +S +H N L+E GI+ IMV+E+F ++++ + ++S+ E+A ++ANILES
Sbjct: 550 RRAAFKALAHISLYHPNNKILVEVGIIKIMVEEMFTKRVFSDLMNSRNEAATILANILES 609
Query: 183 GADPRFIQVYKHGHTMASDYVIYNIVHMLRYSNTDELNKNLIRILLSLTKLPKPFAAIVS 362
G + +V HGHT+ SDY +YNI+HML+ S+ D+LN +LIRILLSL+K P+ A IVS
Sbjct: 610 GLEHETFEVNTHGHTLGSDYFVYNIIHMLKNSSPDDLNIDLIRILLSLSKSPRAMATIVS 669
Query: 363 VMKETEASYNVIEFLNSKNEDLVVNSGKLLIKLITHMGHTIAEALCKTREQPGSLIK-KL 539
V+KET+AS+ +IE +N+ +++L V + KLLI L ++GHT++E LCKTR QP +LI+ +
Sbjct: 670 VIKETDASFAMIELINNPHDELGVGALKLLIALTPYIGHTLSERLCKTRGQPENLIQCPV 729
Query: 540 ETDQVTKKHAISVNLVAKXXXXXXXXXXXXXXSGTXXXXXXXXXXFQRSETRIGRHERHY 719
E +Q+T+KHA+S L+AK QRS R R+ +
Sbjct: 730 EANQITEKHAVSAKLLAKLPHQNLTLNLALVNESIVSEILHAIHLIQRSGARTSRYATDF 789
Query: 720 IEGLVGILLRFTTTLYDHEILQMAKEQNLTTVFTELLVRKSGSDEVQRMSAIGLENLSSE 899
+EGLVGIL+RFTTTLY+ +++ +A+ +LT+VF +LL+ K+ SDEVQR+SA GLENLSS
Sbjct: 790 LEGLVGILVRFTTTLYEPQMMYLARNHDLTSVFVDLLM-KTSSDEVQRLSATGLENLSST 848
Query: 900 TVNLSKP----AIEIRGSTKMAKFLPRVFSIGSRRESRVKPCPVHRGACSPSTTFCLLES 1067
T+ LS+P + + GS M PR FS+ S ++ +++ C +HRG CS TFCL+E+
Sbjct: 849 TMTLSRPPQPRSTKFMGSLSM----PRSFSLRSSKKKQIEICAIHRGVCSAKNTFCLVEA 904
Query: 1068 NALGKLVRCLQHENVKVVEAALSAICTLLDEKVDVERSLEVLGEMELVEQVVGVLRKHKQ 1247
NA+ KL+ CLQ + V+VVE+AL+AICTLLD+KV+VE+SL +L EM V+ ++ +++HK+
Sbjct: 905 NAITKLLACLQSDKVEVVESALAAICTLLDDKVEVEKSLSMLSEMNAVQLILNAVKEHKK 964
Query: 1248 DGIWQKAFWVIERFVVKKGE----ELYGDEQISEVLQDAYQHGNSRSRQVAQNMLSHLKK 1415
+ + QKAFW+I++F+++ G+ E+ D +S +L A+ G+ +RQ+A+N+L L K
Sbjct: 965 ESLLQKAFWMIDKFIIRGGDKYASEISQDRMLSGMLVSAFHRGDGNTRQMAENILRRLDK 1024
>ref|NP_001154460.1| putative U-box domain-containing protein 42 [Arabidopsis thaliana]
gi|332196745|gb|AEE34866.1| putative U-box
domain-containing protein 42 [Arabidopsis thaliana]
Length = 1035
Score = 411 bits (1057), Expect = e-112
Identities = 211/460 (45%), Positives = 318/460 (69%), Gaps = 5/460 (1%)
Frame = +3
Query: 3 RNAAFKALLRLSSHHSNGTTLIEAGIVPIMVDEIFIRKIYDEPVDSKEESAAVIANILES 182
R AAFKAL +S +H N L+E GI+ IMV+E+F ++++ + ++S+ E+A ++ANILES
Sbjct: 550 RRAAFKALAHISLYHPNNKILVEVGIIKIMVEEMFTKRVFSDLMNSRNEAATILANILES 609
Query: 183 GADPRFIQVYKHGHTMASDYVIYNIVHMLRYSNTDELNKNLIRILLSLTKLPKPFAAIVS 362
G + +V HGHT+ SDY +YNI+HML+ S+ D+LN +LIRILLSL+K P+ A IVS
Sbjct: 610 GLEHETFEVNTHGHTLGSDYFVYNIIHMLKNSSPDDLNIDLIRILLSLSKSPRAMATIVS 669
Query: 363 VMKETEASYNVIEFLNSKNEDLVVNSGKLLIKLITHMGHTIAEALCKTREQPGSLIK-KL 539
V+KET+AS+ +IE +N+ +++L V + KLLI L ++GHT++E LCKTR QP +LI+ +
Sbjct: 670 VIKETDASFAMIELINNPHDELGVGALKLLIALTPYIGHTLSERLCKTRGQPENLIQCPV 729
Query: 540 ETDQVTKKHAISVNLVAKXXXXXXXXXXXXXXSGTXXXXXXXXXXFQRSETRIGRHERHY 719
E +Q+T+KHA+S L+AK QRS R R+ +
Sbjct: 730 EANQITEKHAVSAKLLAKLPHQNLTLNLALVNESIVSEILHAIHLIQRSGARTSRYATDF 789
Query: 720 IEGLVGILLRFTTTLYDHEILQMAKEQNLTTVFTELLVRKSGSDEVQRMSAIGLENLSSE 899
+EGLVGIL+RFTTTLY+ +++ +A+ +LT+VF +LL+ K+ SDEVQR+SA GLENLSS
Sbjct: 790 LEGLVGILVRFTTTLYEPQMMYLARNHDLTSVFVDLLM-KTSSDEVQRLSATGLENLSST 848
Query: 900 TVNLSKP----AIEIRGSTKMAKFLPRVFSIGSRRESRVKPCPVHRGACSPSTTFCLLES 1067
T+ LS+P + + GS M PR FS+ S ++ +++ C +HRG CS TFCL+E+
Sbjct: 849 TMTLSRPPQPRSTKFMGSLSM----PRSFSLRSSKKKQIEICAIHRGVCSAKNTFCLVEA 904
Query: 1068 NALGKLVRCLQHENVKVVEAALSAICTLLDEKVDVERSLEVLGEMELVEQVVGVLRKHKQ 1247
NA+ KL+ CLQ + V+VVE+AL+AICTLLD+KV+VE+SL +L EM V+ ++ +++HK+
Sbjct: 905 NAITKLLACLQSDKVEVVESALAAICTLLDDKVEVEKSLSMLSEMNAVQLILNAVKEHKK 964
Query: 1248 DGIWQKAFWVIERFVVKKGEELYGDEQISEVLQDAYQHGN 1367
+ + QKAFW+I++F+++ GD+ SE+ QD G+
Sbjct: 965 ESLLQKAFWMIDKFIIRG-----GDKYASEISQDRMLSGD 999