BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00023548
         (3151 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002461035.1| hypothetical protein SORBIDRAFT_02g039520 [S...  1414   0.0  
ref|NP_001062659.1| Os09g0246200 [Oryza sativa Japonica Group] g...  1410   0.0  
gb|EEE69251.1| hypothetical protein OsJ_28503 [Oryza sativa Japo...  1410   0.0  
ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mi...  1405   0.0  
ref|XP_003577161.1| PREDICTED: DNA-directed RNA polymerase 2, ch...  1392   0.0  

>ref|XP_002461035.1| hypothetical protein SORBIDRAFT_02g039520 [Sorghum bicolor]
            gi|241924412|gb|EER97556.1| hypothetical protein
            SORBIDRAFT_02g039520 [Sorghum bicolor]
          Length = 976

 Score = 1414 bits (3661), Expect = 0.0
 Identities = 689/848 (81%), Positives = 757/848 (89%), Gaps = 2/848 (0%)
 Frame = -2

Query: 3099 GIGSGKYLILKRRQIKIETEAWEQAAKEYKELLMDMCEQKLAPNLPYVKSLFLGWFEPLR 2920
            G+   +Y  L+RRQI++ETEAWEQAAKEY+ELL DMCEQKLAPNLPY+KSLFLGWFEPLR
Sbjct: 129  GMTYHRYTSLRRRQIRVETEAWEQAAKEYRELLADMCEQKLAPNLPYIKSLFLGWFEPLR 188

Query: 2919 DQIVAEQQLCSDPKSRLSHAPYFNRLPADMMAVITMHKLMSLLMTGEGAGSVRVVHAACH 2740
            DQIV EQ+L +DP SR SH PYFN LPADMMAVITMHKLM LLMTG G GSVRV+ AAC 
Sbjct: 189  DQIVTEQELVADPGSRASHGPYFNMLPADMMAVITMHKLMGLLMTGSGDGSVRVIQAACQ 248

Query: 2739 IGEAIEQEVRIHSFLE--RXXXXXXXXXXXXXXXDVIVAKEQDILRKKVTNLMKKQKLHL 2566
            IGEAIE EVRI+ FLE  R               D  +AKEQ  LRKKVT+LMKKQKL  
Sbjct: 249  IGEAIEHEVRINRFLEKTRKKSNKEMEKEEEAAGDTDIAKEQQRLRKKVTDLMKKQKLRQ 308

Query: 2565 VRKIVRGQDDTRPWGQDAQAKVGSRLIELLMETAYVQPPVDQAADGPPDIRPAFRHSLRT 2386
            VR IV+ QD++RPWGQD QAKVGSRLIEL M+TA++QPP  Q++DG PDIRPAFRH +RT
Sbjct: 309  VRNIVKNQDNSRPWGQDVQAKVGSRLIELFMDTAHIQPPASQSSDGLPDIRPAFRHEMRT 368

Query: 2385 VTKEQRKNSKRFGVIECDPIIRQGLDRTARHMVIPYMPMLIPPVNWTGYDKGAHLFLPSY 2206
            V KEQ+K+S+R+GVI+CDP++RQGLDRTA+HMVIPYMPMLIPP+ WTGYDKGAHLFLPSY
Sbjct: 369  VAKEQQKSSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPICWTGYDKGAHLFLPSY 428

Query: 2205 VMRIHGAKQQREAVKRAPRKQLDRVFEALDTLGNTKWRINKRVLSIVDRIWSSGGRLADL 2026
            VMR HGA+QQREAVKRAPR+Q+  VFEAL+TLG+TKWR+NKRVLSIVDRIWSSGGRLADL
Sbjct: 429  VMRTHGARQQREAVKRAPREQMQSVFEALNTLGSTKWRVNKRVLSIVDRIWSSGGRLADL 488

Query: 2025 VDRDDIPLPEKPVTEDENXXXXXXXXXXXXXKENSERHSQRCDVELKLAVARKMKDEEGF 1846
            VDR D+PLPEKP TEDE              KENSERHSQRCDVELKLAVARKMKDEEGF
Sbjct: 489  VDRTDVPLPEKPDTEDETLIKNWKWHLRSVKKENSERHSQRCDVELKLAVARKMKDEEGF 548

Query: 1845 YYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYANGVD 1666
            YYPHNLDFRGRAYPMHPYLNHLGSDLCRG+LEFAEGRPLGKSGL WLKIHLANLYA GVD
Sbjct: 549  YYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLHWLKIHLANLYAGGVD 608

Query: 1665 KLSYDGRLAFTENHLADIFDSADRPLEGKRWWLGAEDPFQCLAVCINLAEALRSSSPETT 1486
            KLSYDGR+AFTENHL +IFDSADRPLEGKRWWLGAEDPFQCLAVC+NL EALRSSSPETT
Sbjct: 609  KLSYDGRVAFTENHLEEIFDSADRPLEGKRWWLGAEDPFQCLAVCMNLTEALRSSSPETT 668

Query: 1485 ISHLPVHQDGSCNGLQHYAALGRDKLGAISVNLVAGEKPADVYSGIAARVLDIMRNDAQQ 1306
            ISH+PVHQDGSCNGLQHYAALGRDKLGAI+VNLVAGEKPADVY+GIA RVL+IMR DAQ+
Sbjct: 669  ISHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATRVLEIMRMDAQK 728

Query: 1305 DPATDSNVLRARLLVDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERGLDAEDSELF 1126
            DP+ D +V RARL+VDQVDRKLVKQTVMTSVYGVTYVGAR+QIKRRLKERG+  +++ELF
Sbjct: 729  DPSIDPDVARARLIVDQVDRKLVKQTVMTSVYGVTYVGARDQIKRRLKERGVIPDEAELF 788

Query: 1125 SASCYAAKTTLTALGEMFQAARGIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLG 946
             ASCYAAK TLTALGEMFQAARGIM+WLGDCAK+IA EN+PVRWTTPLGLPVVQPYRKLG
Sbjct: 789  GASCYAAKVTLTALGEMFQAARGIMNWLGDCAKVIACENEPVRWTTPLGLPVVQPYRKLG 848

Query: 945  RHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVH 766
            RHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACK+ GLNFAGVH
Sbjct: 849  RHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKRQGLNFAGVH 908

Query: 765  DSYWTHACDVDEMNRILREKFVELYETPILENLLESFQQANPSLSFPPLPERGDFNLRDV 586
            DSYWTHACDVD MN+ILREKFVELY+TPILENLLESF+++ P L FPPLPERGDF++++V
Sbjct: 909  DSYWTHACDVDTMNKILREKFVELYDTPILENLLESFEKSFPKLKFPPLPERGDFDMKEV 968

Query: 585  LESTYFFN 562
            LES YFFN
Sbjct: 969  LESPYFFN 976


>ref|NP_001062659.1| Os09g0246200 [Oryza sativa Japonica Group]
            gi|30698494|dbj|BAC76604.1| RpoT1 [Oryza sativa Japonica
            Group] gi|37360973|dbj|BAC98395.1| T7 bacteriophage-type
            single subunit RNA polymerase [Oryza sativa Japonica
            Group] gi|113630892|dbj|BAF24573.1| Os09g0246200 [Oryza
            sativa Japonica Group]
          Length = 1017

 Score = 1410 bits (3651), Expect = 0.0
 Identities = 688/859 (80%), Positives = 759/859 (88%), Gaps = 1/859 (0%)
 Frame = -2

Query: 3135 RRPQPVQQRTVCGIGSGKYLILKRRQIKIETEAWEQAAKEYKELLMDMCEQKLAPNLPYV 2956
            R     +   V G+G  KY +L+RRQI+IETEAWEQAA+EY+ELL DMC+QKLAPNLPYV
Sbjct: 159  RGKHSAEAMAVHGVGYHKYAMLRRRQIQIETEAWEQAAEEYRELLADMCQQKLAPNLPYV 218

Query: 2955 KSLFLGWFEPLRDQIVAEQQLCSDPKSRLSHAPYFNRLPADMMAVITMHKLMSLLMTGEG 2776
            KSLFLGWFEPLRDQI+AEQ+L  +  +R SHA YFN LPADMMAVITMHKLM LLMTG G
Sbjct: 219  KSLFLGWFEPLRDQIIAEQELVGERGARASHARYFNMLPADMMAVITMHKLMGLLMTGSG 278

Query: 2775 AGSVRVVHAACHIGEAIEQEVRIHSFLERXXXXXXXXXXXXXXXDVI-VAKEQDILRKKV 2599
             GSVRV+ AAC IGEAIE EVRIH FLE+                   +AKEQ+ LRKKV
Sbjct: 279  DGSVRVIQAACQIGEAIEHEVRIHKFLEKTKKKSNKEMDNEEEGGDSDIAKEQERLRKKV 338

Query: 2598 TNLMKKQKLHLVRKIVRGQDDTRPWGQDAQAKVGSRLIELLMETAYVQPPVDQAADGPPD 2419
            T+LMKKQK+  VR IV+ QD+++PWGQDA AKVGSRLIEL++ETAY+QPP  Q+ADGPPD
Sbjct: 339  TDLMKKQKIRQVRNIVKKQDNSKPWGQDAHAKVGSRLIELMIETAYIQPPASQSADGPPD 398

Query: 2418 IRPAFRHSLRTVTKEQRKNSKRFGVIECDPIIRQGLDRTARHMVIPYMPMLIPPVNWTGY 2239
            IRPAF H +RTV +EQ+K+S+R+GVI+CDP++RQGLDRTA+HMVIPYMPMLIPP++WTGY
Sbjct: 399  IRPAFTHEMRTVAREQQKSSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPISWTGY 458

Query: 2238 DKGAHLFLPSYVMRIHGAKQQREAVKRAPRKQLDRVFEALDTLGNTKWRINKRVLSIVDR 2059
            DKGAHLFLPSYVMR HGA+QQR+AV+RAPR+Q+  VFEAL+TLG+TKWR+NKRVLSIVDR
Sbjct: 459  DKGAHLFLPSYVMRTHGARQQRDAVRRAPREQMQSVFEALNTLGSTKWRVNKRVLSIVDR 518

Query: 2058 IWSSGGRLADLVDRDDIPLPEKPVTEDENXXXXXXXXXXXXXKENSERHSQRCDVELKLA 1879
            IWSSGGRLADLVDR D+ LPEKP TEDE+             KENSERHSQRCDVELKLA
Sbjct: 519  IWSSGGRLADLVDRTDVALPEKPDTEDEDKLKKWRWTLRAAKKENSERHSQRCDVELKLA 578

Query: 1878 VARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKI 1699
            VARKMKDE+GFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKI
Sbjct: 579  VARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKI 638

Query: 1698 HLANLYANGVDKLSYDGRLAFTENHLADIFDSADRPLEGKRWWLGAEDPFQCLAVCINLA 1519
            HLANLYA GVDKLSYDGR+AFTENHL DIFDSADRPLEGKRWWLGAEDPFQCLAVCINL 
Sbjct: 639  HLANLYAGGVDKLSYDGRIAFTENHLEDIFDSADRPLEGKRWWLGAEDPFQCLAVCINLT 698

Query: 1518 EALRSSSPETTISHLPVHQDGSCNGLQHYAALGRDKLGAISVNLVAGEKPADVYSGIAAR 1339
            EALRS SPET ISH+PVHQDGSCNGLQHYAALGRDKLGAI+VNLVAGEKPADVY+GIA R
Sbjct: 699  EALRSPSPETMISHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATR 758

Query: 1338 VLDIMRNDAQQDPATDSNVLRARLLVDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKE 1159
            V++IM+NDA +DPATD +  RARLL+DQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKE
Sbjct: 759  VVEIMKNDALKDPATDPDAARARLLLDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKE 818

Query: 1158 RGLDAEDSELFSASCYAAKTTLTALGEMFQAARGIMSWLGDCAKIIASENQPVRWTTPLG 979
            R +  +DSELFSASCYAAK TLTALGEMFQAAR IM+WLGDCAK+IA EN+PVRWTTPLG
Sbjct: 819  RDMICDDSELFSASCYAAKVTLTALGEMFQAARSIMNWLGDCAKVIACENEPVRWTTPLG 878

Query: 978  LPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVAC 799
            LPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVAC
Sbjct: 879  LPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVAC 938

Query: 798  KKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYETPILENLLESFQQANPSLSFPPL 619
            K+ GLNFAGVHDSYWTHACDVD MN+ILREKFVELY+TPILENLLESF+++ P L FPPL
Sbjct: 939  KRQGLNFAGVHDSYWTHACDVDTMNKILREKFVELYDTPILENLLESFEKSFPELKFPPL 998

Query: 618  PERGDFNLRDVLESTYFFN 562
            PERGDF+L DVL S YFFN
Sbjct: 999  PERGDFDLTDVLGSPYFFN 1017


>gb|EEE69251.1| hypothetical protein OsJ_28503 [Oryza sativa Japonica Group]
          Length = 983

 Score = 1410 bits (3651), Expect = 0.0
 Identities = 688/859 (80%), Positives = 759/859 (88%), Gaps = 1/859 (0%)
 Frame = -2

Query: 3135 RRPQPVQQRTVCGIGSGKYLILKRRQIKIETEAWEQAAKEYKELLMDMCEQKLAPNLPYV 2956
            R     +   V G+G  KY +L+RRQI+IETEAWEQAA+EY+ELL DMC+QKLAPNLPYV
Sbjct: 125  RGKHSAEAMAVHGVGYHKYAMLRRRQIQIETEAWEQAAEEYRELLADMCQQKLAPNLPYV 184

Query: 2955 KSLFLGWFEPLRDQIVAEQQLCSDPKSRLSHAPYFNRLPADMMAVITMHKLMSLLMTGEG 2776
            KSLFLGWFEPLRDQI+AEQ+L  +  +R SHA YFN LPADMMAVITMHKLM LLMTG G
Sbjct: 185  KSLFLGWFEPLRDQIIAEQELVGERGARASHARYFNMLPADMMAVITMHKLMGLLMTGSG 244

Query: 2775 AGSVRVVHAACHIGEAIEQEVRIHSFLERXXXXXXXXXXXXXXXDVI-VAKEQDILRKKV 2599
             GSVRV+ AAC IGEAIE EVRIH FLE+                   +AKEQ+ LRKKV
Sbjct: 245  DGSVRVIQAACQIGEAIEHEVRIHKFLEKTKKKSNKEMDNEEEGGDSDIAKEQERLRKKV 304

Query: 2598 TNLMKKQKLHLVRKIVRGQDDTRPWGQDAQAKVGSRLIELLMETAYVQPPVDQAADGPPD 2419
            T+LMKKQK+  VR IV+ QD+++PWGQDA AKVGSRLIEL++ETAY+QPP  Q+ADGPPD
Sbjct: 305  TDLMKKQKIRQVRNIVKKQDNSKPWGQDAHAKVGSRLIELMIETAYIQPPASQSADGPPD 364

Query: 2418 IRPAFRHSLRTVTKEQRKNSKRFGVIECDPIIRQGLDRTARHMVIPYMPMLIPPVNWTGY 2239
            IRPAF H +RTV +EQ+K+S+R+GVI+CDP++RQGLDRTA+HMVIPYMPMLIPP++WTGY
Sbjct: 365  IRPAFTHEMRTVAREQQKSSRRYGVIKCDPLVRQGLDRTAKHMVIPYMPMLIPPISWTGY 424

Query: 2238 DKGAHLFLPSYVMRIHGAKQQREAVKRAPRKQLDRVFEALDTLGNTKWRINKRVLSIVDR 2059
            DKGAHLFLPSYVMR HGA+QQR+AV+RAPR+Q+  VFEAL+TLG+TKWR+NKRVLSIVDR
Sbjct: 425  DKGAHLFLPSYVMRTHGARQQRDAVRRAPREQMQSVFEALNTLGSTKWRVNKRVLSIVDR 484

Query: 2058 IWSSGGRLADLVDRDDIPLPEKPVTEDENXXXXXXXXXXXXXKENSERHSQRCDVELKLA 1879
            IWSSGGRLADLVDR D+ LPEKP TEDE+             KENSERHSQRCDVELKLA
Sbjct: 485  IWSSGGRLADLVDRTDVALPEKPDTEDEDKLKKWRWTLRAAKKENSERHSQRCDVELKLA 544

Query: 1878 VARKMKDEEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKI 1699
            VARKMKDE+GFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKI
Sbjct: 545  VARKMKDEDGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKI 604

Query: 1698 HLANLYANGVDKLSYDGRLAFTENHLADIFDSADRPLEGKRWWLGAEDPFQCLAVCINLA 1519
            HLANLYA GVDKLSYDGR+AFTENHL DIFDSADRPLEGKRWWLGAEDPFQCLAVCINL 
Sbjct: 605  HLANLYAGGVDKLSYDGRIAFTENHLEDIFDSADRPLEGKRWWLGAEDPFQCLAVCINLT 664

Query: 1518 EALRSSSPETTISHLPVHQDGSCNGLQHYAALGRDKLGAISVNLVAGEKPADVYSGIAAR 1339
            EALRS SPET ISH+PVHQDGSCNGLQHYAALGRDKLGAI+VNLVAGEKPADVY+GIA R
Sbjct: 665  EALRSPSPETMISHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVAGEKPADVYTGIATR 724

Query: 1338 VLDIMRNDAQQDPATDSNVLRARLLVDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKE 1159
            V++IM+NDA +DPATD +  RARLL+DQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKE
Sbjct: 725  VVEIMKNDALKDPATDPDAARARLLLDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKE 784

Query: 1158 RGLDAEDSELFSASCYAAKTTLTALGEMFQAARGIMSWLGDCAKIIASENQPVRWTTPLG 979
            R +  +DSELFSASCYAAK TLTALGEMFQAAR IM+WLGDCAK+IA EN+PVRWTTPLG
Sbjct: 785  RDMICDDSELFSASCYAAKVTLTALGEMFQAARSIMNWLGDCAKVIACENEPVRWTTPLG 844

Query: 978  LPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVAC 799
            LPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVAC
Sbjct: 845  LPVVQPYRKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVAC 904

Query: 798  KKAGLNFAGVHDSYWTHACDVDEMNRILREKFVELYETPILENLLESFQQANPSLSFPPL 619
            K+ GLNFAGVHDSYWTHACDVD MN+ILREKFVELY+TPILENLLESF+++ P L FPPL
Sbjct: 905  KRQGLNFAGVHDSYWTHACDVDTMNKILREKFVELYDTPILENLLESFEKSFPELKFPPL 964

Query: 618  PERGDFNLRDVLESTYFFN 562
            PERGDF+L DVL S YFFN
Sbjct: 965  PERGDFDLTDVLGSPYFFN 983


>ref|XP_002267464.1| PREDICTED: DNA-directed RNA polymerase 1, mitochondrial [Vitis
            vinifera]
          Length = 978

 Score = 1405 bits (3636), Expect = 0.0
 Identities = 679/852 (79%), Positives = 758/852 (88%)
 Frame = -2

Query: 3117 QQRTVCGIGSGKYLILKRRQIKIETEAWEQAAKEYKELLMDMCEQKLAPNLPYVKSLFLG 2938
            Q + + G+  GK+ +L+RRQIK+ETEAWE+AAKEY+ELL DMCEQKLAPNLPY+KSLFLG
Sbjct: 128  QPKLIGGVAQGKHNVLRRRQIKMETEAWEEAAKEYRELLSDMCEQKLAPNLPYIKSLFLG 187

Query: 2937 WFEPLRDQIVAEQQLCSDPKSRLSHAPYFNRLPADMMAVITMHKLMSLLMTGEGAGSVRV 2758
            WFEPLRD I AEQ LC   K+R ++APYF+ LPADMMAVITMHKLM LLMTGEG GS RV
Sbjct: 188  WFEPLRDVIAAEQDLCKQGKNRAAYAPYFDHLPADMMAVITMHKLMGLLMTGEGNGSARV 247

Query: 2757 VHAACHIGEAIEQEVRIHSFLERXXXXXXXXXXXXXXXDVIVAKEQDILRKKVTNLMKKQ 2578
            V AACHIGEAIE EVRI  F+E+               +  V KEQ+ LRKKV+ LMKKQ
Sbjct: 248  VQAACHIGEAIEHEVRIQRFMEKTKKKSASSNNPDGGSNP-VTKEQEKLRKKVSMLMKKQ 306

Query: 2577 KLHLVRKIVRGQDDTRPWGQDAQAKVGSRLIELLMETAYVQPPVDQAADGPPDIRPAFRH 2398
            KL  VR+IV+ QDD++PWGQDA  KVGSRLIELL+ETAY+QPP DQ  DGPPDIRPAF H
Sbjct: 307  KLQQVRQIVKRQDDSKPWGQDANVKVGSRLIELLIETAYIQPPADQLGDGPPDIRPAFVH 366

Query: 2397 SLRTVTKEQRKNSKRFGVIECDPIIRQGLDRTARHMVIPYMPMLIPPVNWTGYDKGAHLF 2218
            +L+TV KE +K ++R+GVIECDP++R+GL++TARHMVIPYMPML+PP+NWTGYDKGA+LF
Sbjct: 367  TLKTVIKETQKGTRRYGVIECDPLVRKGLEKTARHMVIPYMPMLVPPLNWTGYDKGAYLF 426

Query: 2217 LPSYVMRIHGAKQQREAVKRAPRKQLDRVFEALDTLGNTKWRINKRVLSIVDRIWSSGGR 2038
            LPSYVMRIHGA+QQREA+KRAPRK L+  FEAL+TLGNTKWRINKRVL ++DRIW+SGGR
Sbjct: 427  LPSYVMRIHGARQQREAIKRAPRKALEPAFEALNTLGNTKWRINKRVLGVIDRIWASGGR 486

Query: 2037 LADLVDRDDIPLPEKPVTEDENXXXXXXXXXXXXXKENSERHSQRCDVELKLAVARKMKD 1858
            LADLVDR+D+PLPE+P TEDE              KENSERHSQRCD+ELKLAVARKMKD
Sbjct: 487  LADLVDREDVPLPEEPDTEDEAEIRKWKWKVRSVKKENSERHSQRCDIELKLAVARKMKD 546

Query: 1857 EEGFYYPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYA 1678
            E+GF+YPHNLDFRGRAYPMHPYLNHLGSDLCRG+LEFAEGRPLGKSGLRWLKIHLAN+YA
Sbjct: 547  EDGFFYPHNLDFRGRAYPMHPYLNHLGSDLCRGILEFAEGRPLGKSGLRWLKIHLANVYA 606

Query: 1677 NGVDKLSYDGRLAFTENHLADIFDSADRPLEGKRWWLGAEDPFQCLAVCINLAEALRSSS 1498
             GVDKLSY+GR+AFTENHL DIFDSADRPLEG+RWWL AEDPFQCLA CINL+EALRSSS
Sbjct: 607  GGVDKLSYEGRVAFTENHLEDIFDSADRPLEGRRWWLSAEDPFQCLATCINLSEALRSSS 666

Query: 1497 PETTISHLPVHQDGSCNGLQHYAALGRDKLGAISVNLVAGEKPADVYSGIAARVLDIMRN 1318
            PETTISH+PVHQDGSCNGLQHYAALGRDKLGA +VNLVAGEKPADVYSGIAARVLDIM+ 
Sbjct: 667  PETTISHMPVHQDGSCNGLQHYAALGRDKLGAAAVNLVAGEKPADVYSGIAARVLDIMQR 726

Query: 1317 DAQQDPATDSNVLRARLLVDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERGLDAED 1138
            DAQ+DPAT+ N LRARLL+ QVDRKLVKQTVMTSVYGVTY+GAR+QIKRRLKER   A++
Sbjct: 727  DAQKDPATEPNALRARLLISQVDRKLVKQTVMTSVYGVTYIGARDQIKRRLKERCAIADE 786

Query: 1137 SELFSASCYAAKTTLTALGEMFQAARGIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPY 958
             E+FSASCYAAKTTLTALGEMF+AAR IMSWLGDCAK+IASEN PVRW TPLGLPVVQPY
Sbjct: 787  GEVFSASCYAAKTTLTALGEMFEAARSIMSWLGDCAKVIASENHPVRWNTPLGLPVVQPY 846

Query: 957  RKLGRHLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNF 778
            RKLGRHLIKTSLQVL+LQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVAC+KAGLNF
Sbjct: 847  RKLGRHLIKTSLQVLSLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACQKAGLNF 906

Query: 777  AGVHDSYWTHACDVDEMNRILREKFVELYETPILENLLESFQQANPSLSFPPLPERGDFN 598
            AGVHDSYWTHACDVDEMNRILREKFVELY  PILENLLE FQ++ P+L+FPPLPERGDF+
Sbjct: 907  AGVHDSYWTHACDVDEMNRILREKFVELYGMPILENLLEGFQKSFPTLNFPPLPERGDFD 966

Query: 597  LRDVLESTYFFN 562
            LR+VLES YFFN
Sbjct: 967  LREVLESPYFFN 978


>ref|XP_003577161.1| PREDICTED: DNA-directed RNA polymerase 2,
            chloroplastic/mitochondrial-like [Brachypodium
            distachyon]
          Length = 992

 Score = 1392 bits (3603), Expect = 0.0
 Identities = 680/847 (80%), Positives = 747/847 (88%), Gaps = 1/847 (0%)
 Frame = -2

Query: 3099 GIGSGKYLILKRRQIKIETEAWEQAAKEYKELLMDMCEQKLAPNLPYVKSLFLGWFEPLR 2920
            G+GS KY  L++RQ++IETEAWEQAAKEY+ELL DMCE KLAPNLPYVKSLFLGWFEPLR
Sbjct: 146  GMGSSKYAALRQRQVRIETEAWEQAAKEYRELLADMCEHKLAPNLPYVKSLFLGWFEPLR 205

Query: 2919 DQIVAEQQLCSDPKSRLSHAPYFNRLPADMMAVITMHKLMSLLMTGEGAGSVRVVHAACH 2740
            DQI+AEQ+L  +  +R SHAPYFN LPADMMAVITMHKLM LLMTG G GSVRV+ AAC 
Sbjct: 206  DQIIAEQELVGERGARASHAPYFNMLPADMMAVITMHKLMGLLMTGSGDGSVRVIQAACQ 265

Query: 2739 IGEAIEQEVRIHSFLERXXXXXXXXXXXXXXXDVI-VAKEQDILRKKVTNLMKKQKLHLV 2563
            IGEAIE EVRIH FLE+                   +AKEQ  LRKKVT+LMKKQK+  V
Sbjct: 266  IGEAIEHEVRIHKFLEKTKKKNTKEVDNVVEAGDSDIAKEQQRLRKKVTDLMKKQKIRQV 325

Query: 2562 RKIVRGQDDTRPWGQDAQAKVGSRLIELLMETAYVQPPVDQAADGPPDIRPAFRHSLRTV 2383
            R IV+ QD TRPWGQDA AKVGSRLIELL+ETA++QPPV Q+AD  PDIRPAF H +RTV
Sbjct: 326  RNIVKKQDSTRPWGQDAHAKVGSRLIELLIETAHIQPPVSQSADSTPDIRPAFTHEMRTV 385

Query: 2382 TKEQRKNSKRFGVIECDPIIRQGLDRTARHMVIPYMPMLIPPVNWTGYDKGAHLFLPSYV 2203
            T+EQ+K+S+R+GVI+CDP+IRQGLDRTA+HMVIPYMPMLIPP++WTGYDKGAHLFLPSYV
Sbjct: 386  TREQQKSSRRYGVIKCDPLIRQGLDRTAKHMVIPYMPMLIPPISWTGYDKGAHLFLPSYV 445

Query: 2202 MRIHGAKQQREAVKRAPRKQLDRVFEALDTLGNTKWRINKRVLSIVDRIWSSGGRLADLV 2023
            MR HGA+QQREAVK+AP++Q+  +FEALDTLG+TKWRINK+VLSIVDRIWSSGGRLADLV
Sbjct: 446  MRTHGARQQREAVKKAPKEQMQLIFEALDTLGSTKWRINKKVLSIVDRIWSSGGRLADLV 505

Query: 2022 DRDDIPLPEKPVTEDENXXXXXXXXXXXXXKENSERHSQRCDVELKLAVARKMKDEEGFY 1843
            DR D+ LPEKP TEDE              KENSERHSQRCDVELKLAVARKMKDE GFY
Sbjct: 506  DRTDVALPEKPDTEDETELKKWRWNLRSVKKENSERHSQRCDVELKLAVARKMKDEVGFY 565

Query: 1842 YPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFAEGRPLGKSGLRWLKIHLANLYANGVDK 1663
            YPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEF+EGRPLG SGL WLKIHLANLYA GVDK
Sbjct: 566  YPHNLDFRGRAYPMHPYLNHLGSDLCRGVLEFSEGRPLGDSGLCWLKIHLANLYAGGVDK 625

Query: 1662 LSYDGRLAFTENHLADIFDSADRPLEGKRWWLGAEDPFQCLAVCINLAEALRSSSPETTI 1483
            LSYDGR+AFTENHL DIFDSA+RPLEGKRWWLGAEDPFQCLAVC++L EALRSSSPE  I
Sbjct: 626  LSYDGRIAFTENHLEDIFDSANRPLEGKRWWLGAEDPFQCLAVCMDLTEALRSSSPEAMI 685

Query: 1482 SHLPVHQDGSCNGLQHYAALGRDKLGAISVNLVAGEKPADVYSGIAARVLDIMRNDAQQD 1303
            SH+PVHQDGSCNGLQHYAALGRDKLGAI+VNLV+GEKPADVYSGIA RV++IMR DAQ+D
Sbjct: 686  SHIPVHQDGSCNGLQHYAALGRDKLGAIAVNLVSGEKPADVYSGIATRVVEIMRRDAQKD 745

Query: 1302 PATDSNVLRARLLVDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERGLDAEDSELFS 1123
            PA D +  RARLLVDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERG+  +DSELF+
Sbjct: 746  PALDPDAARARLLVDQVDRKLVKQTVMTSVYGVTYVGAREQIKRRLKERGVIGDDSELFA 805

Query: 1122 ASCYAAKTTLTALGEMFQAARGIMSWLGDCAKIIASENQPVRWTTPLGLPVVQPYRKLGR 943
            ASCYAAK TLTALGEMF+AAR IM+WLGDCAK+IA EN+PVRW TPLGLPVVQPYRKLGR
Sbjct: 806  ASCYAAKVTLTALGEMFEAARSIMNWLGDCAKVIACENEPVRWMTPLGLPVVQPYRKLGR 865

Query: 942  HLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACKKAGLNFAGVHD 763
            HLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVAC K GL FAGVHD
Sbjct: 866  HLIKTSLQVLTLQRETDKVMVKRQRTAFPPNFVHSLDGSHMMMTAVACNKQGLYFAGVHD 925

Query: 762  SYWTHACDVDEMNRILREKFVELYETPILENLLESFQQANPSLSFPPLPERGDFNLRDVL 583
            SYWTHACDVD MN+ILREKFVELY+ PILENLL+SF+ + P+L FPPLPERGDF+L DVL
Sbjct: 926  SYWTHACDVDTMNKILREKFVELYDAPILENLLDSFETSFPTLRFPPLPERGDFDLNDVL 985

Query: 582  ESTYFFN 562
            +S YFFN
Sbjct: 986  QSPYFFN 992