BLASTX nr result

ID: Dioscorea21_contig00023544 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00023544
         (401 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281726.1| PREDICTED: double-strand break repair protei...   135   5e-30
ref|XP_002864322.1| hypothetical protein ARALYDRAFT_495511 [Arab...   133   2e-29
ref|NP_200237.1| double-strand break repair protein MRE11 [Arabi...   133   2e-29
ref|XP_002525759.1| meiotic recombination repair protein, putati...   130   9e-29
ref|XP_002330391.1| predicted protein [Populus trichocarpa] gi|2...   130   9e-29

>ref|XP_002281726.1| PREDICTED: double-strand break repair protein MRE11 [Vitis
           vinifera] gi|302143084|emb|CBI20379.3| unnamed protein
           product [Vitis vinifera]
          Length = 731

 Score =  135 bits (339), Expect = 5e-30
 Identities = 64/77 (83%), Positives = 71/77 (92%)
 Frame = -3

Query: 231 MAESSMEDAGDTLRVLIATDCHLGYMEKDEIRRFDSFQAFEEICSIAEEKKVDFLLLGGD 52
           M +SS EDA +TLRVL+ATDCHLGYMEKDE+RR DSFQAFEEICSIA++K+VDFLLLGGD
Sbjct: 1   MGDSSREDASNTLRVLVATDCHLGYMEKDEVRRHDSFQAFEEICSIADQKQVDFLLLGGD 60

Query: 51  LFHENKPSRFTLVKAIE 1
           LFHENKPSR TLVK IE
Sbjct: 61  LFHENKPSRSTLVKTIE 77


>ref|XP_002864322.1| hypothetical protein ARALYDRAFT_495511 [Arabidopsis lyrata subsp.
           lyrata] gi|297310157|gb|EFH40581.1| hypothetical protein
           ARALYDRAFT_495511 [Arabidopsis lyrata subsp. lyrata]
          Length = 733

 Score =  133 bits (334), Expect = 2e-29
 Identities = 65/73 (89%), Positives = 68/73 (93%)
 Frame = -3

Query: 219 SMEDAGDTLRVLIATDCHLGYMEKDEIRRFDSFQAFEEICSIAEEKKVDFLLLGGDLFHE 40
           S ED  DTLRVL+ATDCHLGYMEKDEIRR DSF+AFEEICSIAEEK+VDFLLLGGDLFHE
Sbjct: 2   SREDFSDTLRVLVATDCHLGYMEKDEIRRHDSFKAFEEICSIAEEKQVDFLLLGGDLFHE 61

Query: 39  NKPSRFTLVKAIE 1
           NKPSR TLVKAIE
Sbjct: 62  NKPSRTTLVKAIE 74


>ref|NP_200237.1| double-strand break repair protein MRE11 [Arabidopsis thaliana]
           gi|17380154|sp|Q9XGM2.1|MRE11_ARATH RecName:
           Full=Double-strand break repair protein MRE11
           gi|5524769|emb|CAB50793.1| Mre11 protein [Arabidopsis
           thaliana] gi|9759499|dbj|BAB10749.1| DNA repair and
           meiosis protein Mre11 [Arabidopsis thaliana]
           gi|332009093|gb|AED96476.1| double-strand break repair
           protein MRE11 [Arabidopsis thaliana]
          Length = 720

 Score =  133 bits (334), Expect = 2e-29
 Identities = 65/73 (89%), Positives = 68/73 (93%)
 Frame = -3

Query: 219 SMEDAGDTLRVLIATDCHLGYMEKDEIRRFDSFQAFEEICSIAEEKKVDFLLLGGDLFHE 40
           S ED  DTLRVL+ATDCHLGYMEKDEIRR DSF+AFEEICSIAEEK+VDFLLLGGDLFHE
Sbjct: 2   SREDFSDTLRVLVATDCHLGYMEKDEIRRHDSFKAFEEICSIAEEKQVDFLLLGGDLFHE 61

Query: 39  NKPSRFTLVKAIE 1
           NKPSR TLVKAIE
Sbjct: 62  NKPSRTTLVKAIE 74


>ref|XP_002525759.1| meiotic recombination repair protein, putative [Ricinus communis]
           gi|223534909|gb|EEF36595.1| meiotic recombination repair
           protein, putative [Ricinus communis]
          Length = 765

 Score =  130 bits (328), Expect = 9e-29
 Identities = 62/77 (80%), Positives = 69/77 (89%)
 Frame = -3

Query: 231 MAESSMEDAGDTLRVLIATDCHLGYMEKDEIRRFDSFQAFEEICSIAEEKKVDFLLLGGD 52
           M + S ED  + LR+L+ATDCHLGYMEKDE+RR DSFQAFEEICSIAE+K+VDFLLLGGD
Sbjct: 1   MGDLSSEDISNMLRILVATDCHLGYMEKDEVRRHDSFQAFEEICSIAEQKQVDFLLLGGD 60

Query: 51  LFHENKPSRFTLVKAIE 1
           LFHENKPSR TLVKAIE
Sbjct: 61  LFHENKPSRSTLVKAIE 77


>ref|XP_002330391.1| predicted protein [Populus trichocarpa] gi|222871776|gb|EEF08907.1|
           predicted protein [Populus trichocarpa]
          Length = 772

 Score =  130 bits (328), Expect = 9e-29
 Identities = 62/77 (80%), Positives = 68/77 (88%)
 Frame = -3

Query: 231 MAESSMEDAGDTLRVLIATDCHLGYMEKDEIRRFDSFQAFEEICSIAEEKKVDFLLLGGD 52
           M + S +D   TLR+L+ATDCHLGYMEKDE+RR DSFQAFEE CSIAE+KKVDFLLLGGD
Sbjct: 1   MGDLSRDDDASTLRILVATDCHLGYMEKDEVRRHDSFQAFEETCSIAEQKKVDFLLLGGD 60

Query: 51  LFHENKPSRFTLVKAIE 1
           LFHENKPSR TLVKAIE
Sbjct: 61  LFHENKPSRSTLVKAIE 77


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