BLASTX nr result

ID: Dioscorea21_contig00023539 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00023539
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAH09315.1| 50S ribosomal protein L22 [Stemona aphylla] gi|2...    61   1e-07
dbj|BAG06411.1| ribosomal protein L22 [Sagittaria trifolia]            58   9e-07
gb|AEZ49247.1| ribosomal protein L22, partial [Albuca kirkii]          57   2e-06
gb|ABU85461.1| ribosomal protein L22 [Musa acuminata]                  56   4e-06
ref|YP_007476001.1| ribosomal protein L22 [Bismarckia nobilis] g...    55   8e-06

>dbj|BAH09315.1| 50S ribosomal protein L22 [Stemona aphylla]
           gi|219687629|dbj|BAH09327.1| 50S ribosomal protein L22
           [Stemona sp. Shut-0001] gi|219687633|dbj|BAH09330.1| 50S
           ribosomal protein L22 [Stemona phyllantha]
           gi|256016930|dbj|BAH97247.1| ribosomal protein L22
           [Stemona parviflora]
          Length = 128

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 27/32 (84%), Positives = 31/32 (96%)
 Frame = -2

Query: 159 SEGRSYPVKKPTCYITIVLKDKSKSFLNESKI 64
           + GRSYP+KKPTC+ITIVLK+KSKSFLNESKI
Sbjct: 97  ARGRSYPIKKPTCHITIVLKEKSKSFLNESKI 128


>dbj|BAG06411.1| ribosomal protein L22 [Sagittaria trifolia]
          Length = 128

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 25/32 (78%), Positives = 29/32 (90%)
 Frame = -2

Query: 159 SEGRSYPVKKPTCYITIVLKDKSKSFLNESKI 64
           + GRSYP+KKPTC+ITI+LKDKSKSFLNE  I
Sbjct: 97  ARGRSYPIKKPTCHITIILKDKSKSFLNEFNI 128


>gb|AEZ49247.1| ribosomal protein L22, partial [Albuca kirkii]
          Length = 130

 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 24/32 (75%), Positives = 30/32 (93%)
 Frame = -2

Query: 159 SEGRSYPVKKPTCYITIVLKDKSKSFLNESKI 64
           + GRSYP+K+PTC+ITIVLKDKSK FL+ESK+
Sbjct: 99  ARGRSYPIKRPTCHITIVLKDKSKLFLDESKV 130


>gb|ABU85461.1| ribosomal protein L22 [Musa acuminata]
          Length = 129

 Score = 55.8 bits (133), Expect = 4e-06
 Identities = 24/32 (75%), Positives = 30/32 (93%)
 Frame = -2

Query: 159 SEGRSYPVKKPTCYITIVLKDKSKSFLNESKI 64
           + GRSYP+K+PTC+ITIVLKDKSK FL+ES+I
Sbjct: 98  ARGRSYPIKRPTCHITIVLKDKSKLFLDESRI 129


>ref|YP_007476001.1| ribosomal protein L22 [Bismarckia nobilis]
           gi|449326483|gb|AGE93065.1| ribosomal protein L22
           [Bismarckia nobilis]
          Length = 108

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 27/50 (54%), Positives = 38/50 (76%), Gaps = 1/50 (2%)
 Frame = -2

Query: 216 AYLQLQQVKRIKQVK*ISS-SEGRSYPVKKPTCYITIVLKDKSKSFLNES 70
           +++   +V R   VK +   + GRSYP+KKPTC+ITIVLK+KSKSFL++S
Sbjct: 58  SFISKAEVNRSAIVKKLRPRARGRSYPIKKPTCHITIVLKEKSKSFLDQS 107


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