BLASTX nr result

ID: Dioscorea21_contig00023526 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00023526
         (473 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFS65100.1| S-ribonuclease binding protein [Elaeis guineensis]     102   3e-20
ref|XP_003589169.1| Baculoviral IAP repeat-containing protein [M...    80   1e-13
ref|XP_002334565.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
ref|XP_002327156.1| predicted protein [Populus trichocarpa] gi|2...    77   1e-12
gb|ABK93084.1| unknown [Populus trichocarpa]                           76   3e-12

>gb|AFS65100.1| S-ribonuclease binding protein [Elaeis guineensis]
          Length = 323

 Score =  102 bits (254), Expect = 3e-20
 Identities = 60/139 (43%), Positives = 78/139 (56%), Gaps = 10/139 (7%)
 Frame = -2

Query: 388 FMNFVPIESQ------IFATSTLPNPS-PPYVHVMGIAPAGEGAV---VEGWEPNRKRVK 239
           + +FVP + Q       F+T++ P+ S P +VHVMG+AP    A      GWEP  K++K
Sbjct: 18  YRSFVPADGQTTAPIAFFSTTSFPDQSHPSFVHVMGLAPGSVPAADGGSNGWEPRSKKLK 77

Query: 238 EQEFLEDSQISSIDFXXXXXXXXXXXXXXLDDRRXXXXXXXXXXXXXSIDEEIGREIQRQ 59
           EQ+FLE+SQISSIDF               D R               IDE+I RE+QR 
Sbjct: 78  EQDFLENSQISSIDFLQTGSVSTGLGLSLDDRRVAASSGDSPLPLLPMIDEDIDREVQRM 137

Query: 58  DAEMDRFLKLQGERLRQQI 2
           DAEMDRF+K++ ERLRQ I
Sbjct: 138 DAEMDRFIKIEVERLRQSI 156


>ref|XP_003589169.1| Baculoviral IAP repeat-containing protein [Medicago truncatula]
           gi|355478217|gb|AES59420.1| Baculoviral IAP
           repeat-containing protein [Medicago truncatula]
           gi|388499058|gb|AFK37595.1| unknown [Medicago
           truncatula]
          Length = 340

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 60/154 (38%), Positives = 75/154 (48%), Gaps = 23/154 (14%)
 Frame = -2

Query: 394 KPFMNFVPIESQIFATSTLPNPS--------PPYV---HVMGIAPA-------GEGAVVE 269
           K F N   IE Q+       NP+        PPY+   HV+G AP         +G V  
Sbjct: 23  KSFRNLQTIEGQMSQQMAFYNPTDLQDQSQHPPYIPPFHVVGFAPGPVIPADGSDGGVDL 82

Query: 268 GW----EPNRKRVKEQEFLED-SQISSIDFXXXXXXXXXXXXXXLDDRRXXXXXXXXXXX 104
            W    EP RKR+KEQ+FLE+ SQISS+DF               + R            
Sbjct: 83  HWNFGLEPERKRLKEQDFLENNSQISSVDFLQPRSVSTGLGLSLDNTR---LASTGDSAL 139

Query: 103 XXSIDEEIGREIQRQDAEMDRFLKLQGERLRQQI 2
              I ++I RE+Q+QD EMDRFLKLQGE+LRQ I
Sbjct: 140 LSLIGDDIDRELQQQDLEMDRFLKLQGEQLRQTI 173


>ref|XP_002334565.1| predicted protein [Populus trichocarpa] gi|222872651|gb|EEF09782.1|
           predicted protein [Populus trichocarpa]
          Length = 337

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 58/152 (38%), Positives = 74/152 (48%), Gaps = 21/152 (13%)
 Frame = -2

Query: 394 KPFMNFVPIESQIFATSTLPNPS--------PPYV---HVMGIAPA-----GEGAVVEGW 263
           K   N   I+SQI       NPS        PPYV   HV+G AP       +G +   W
Sbjct: 22  KNLRNLYAIDSQISPAVAYFNPSNLQDQSQHPPYVPPFHVVGFAPGPGNDGSDGGLELQW 81

Query: 262 ----EPNRKRVKEQEFLED-SQISSIDFXXXXXXXXXXXXXXLDDRRXXXXXXXXXXXXX 98
               EP RKR+KEQ+FLE+ SQISS+DF               + R              
Sbjct: 82  NYGLEPKRKRLKEQDFLENNSQISSVDFLQARSVSTGLGLSLDNTR---VSSSGDSALLS 138

Query: 97  SIDEEIGREIQRQDAEMDRFLKLQGERLRQQI 2
            I ++I  E+QRQD E+D+FLK+QG+RLRQ I
Sbjct: 139 LIGDDIDSELQRQDVEVDKFLKIQGDRLRQTI 170


>ref|XP_002327156.1| predicted protein [Populus trichocarpa] gi|222835471|gb|EEE73906.1|
           predicted protein [Populus trichocarpa]
          Length = 337

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 58/152 (38%), Positives = 74/152 (48%), Gaps = 21/152 (13%)
 Frame = -2

Query: 394 KPFMNFVPIESQIFATSTLPNPS--------PPYV---HVMGIAPA-----GEGAVVEGW 263
           K   N   I+SQI       NPS        PPYV   HV+G AP       +G +   W
Sbjct: 22  KNLRNLYAIDSQISPAVAYFNPSNLQDQSQHPPYVPPFHVVGFAPGPGNDGSDGGLELQW 81

Query: 262 ----EPNRKRVKEQEFLED-SQISSIDFXXXXXXXXXXXXXXLDDRRXXXXXXXXXXXXX 98
               EP RKR+KEQ+FLE+ SQISS+DF               + R              
Sbjct: 82  NYGLEPKRKRLKEQDFLENNSQISSVDFLQARSVSTGLGLSLDNTR---VSSSGDSALLS 138

Query: 97  SIDEEIGREIQRQDAEMDRFLKLQGERLRQQI 2
            I ++I  E+QRQD E+D+FLK+QG+RLRQ I
Sbjct: 139 LIGDDIDSELQRQDVEVDKFLKIQGDRLRQTI 170


>gb|ABK93084.1| unknown [Populus trichocarpa]
          Length = 337

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 58/152 (38%), Positives = 73/152 (48%), Gaps = 21/152 (13%)
 Frame = -2

Query: 394 KPFMNFVPIESQIFATSTLPNPS--------PPYV---HVMGIAPA-----GEGAVVEGW 263
           K   N   I+SQI       NPS        PPYV   HV G AP       +G +   W
Sbjct: 22  KNLRNLYAIDSQISPAVAYFNPSNLQDQSQHPPYVPPFHVEGFAPGPGNDGSDGGLELQW 81

Query: 262 ----EPNRKRVKEQEFLED-SQISSIDFXXXXXXXXXXXXXXLDDRRXXXXXXXXXXXXX 98
               EP RKR+KEQ+FLE+ SQISS+DF               + R              
Sbjct: 82  NYGLEPKRKRLKEQDFLENNSQISSVDFLQARSVSTGLGLSLDNTR---VSSSGDSALLS 138

Query: 97  SIDEEIGREIQRQDAEMDRFLKLQGERLRQQI 2
            I ++I  E+QRQD E+D+FLK+QG+RLRQ I
Sbjct: 139 LIGDDIDSELQRQDVEVDKFLKIQGDRLRQTI 170


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