BLASTX nr result

ID: Dioscorea21_contig00023501 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00023501
         (881 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003557306.1| PREDICTED: F-box-like/WD repeat-containing p...   172   1e-40
dbj|BAK04143.1| predicted protein [Hordeum vulgare subsp. vulgare]    171   2e-40
ref|XP_003557307.1| PREDICTED: F-box-like/WD repeat-containing p...   171   3e-40
dbj|BAJ92887.1| predicted protein [Hordeum vulgare subsp. vulgare]    169   6e-40
ref|XP_002447490.1| hypothetical protein SORBIDRAFT_06g001810 [S...   168   1e-39

>ref|XP_003557306.1| PREDICTED: F-box-like/WD repeat-containing protein ebi-like isoform
           1 [Brachypodium distachyon]
          Length = 555

 Score =  172 bits (435), Expect = 1e-40
 Identities = 87/165 (52%), Positives = 111/165 (67%), Gaps = 2/165 (1%)
 Frame = -3

Query: 588 SAARIWKISDD-ISSMHSSLLSVYVLNDYNAKTDGQSGSITNLAWNGEGELLATGSFEGQ 412
           S ARIW I D    S+ SS  SV+VL  +  +T+ +S  +T L WNGEG LLATGS++GQ
Sbjct: 230 STARIWTIPDGPCGSIQSSPTSVHVLKHFKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQ 289

Query: 411 ISIWSKNGELKKTL-KHKDSIFFLEWNRKGDFLLAVSSDYKVIVWDTNKWEPKQELAFNS 235
             IWS++GELK+TL KHK  IF L+WN+KGDFLL+ S D   IVWDT  WE KQ+  F+S
Sbjct: 290 ARIWSRDGELKQTLFKHKGPIFSLKWNKKGDFLLSGSVDKTAIVWDTKTWECKQQFEFHS 349

Query: 234 EQLLGVAWRNDTSFALLSENQRIYVFNVGECLPIKTFFGRQVSIN 100
              L V WRN+TSFA  S +  IYV  +G+  P+K+F G Q  +N
Sbjct: 350 APTLDVDWRNNTSFATCSTDNMIYVCKIGDARPVKSFSGHQSEVN 394


>dbj|BAK04143.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 367

 Score =  171 bits (434), Expect = 2e-40
 Identities = 89/167 (53%), Positives = 111/167 (66%), Gaps = 2/167 (1%)
 Frame = -3

Query: 588 SAARIWKISDD-ISSMHSSLLSVYVLNDYNAKTDGQSGSITNLAWNGEGELLATGSFEGQ 412
           S ARIW I D    S+  S  SV+VL  +  +T+ +S  +T L WNGEG LLATGS++GQ
Sbjct: 174 STARIWTIPDGPCGSIQPSPASVHVLKHFKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQ 233

Query: 411 ISIWSKNGELKKTL-KHKDSIFFLEWNRKGDFLLAVSSDYKVIVWDTNKWEPKQELAFNS 235
             IWS++GELK+TL KHK  IF L+WNRKGDFLL+ S D   IVWDT  WE KQ+  F+S
Sbjct: 234 ARIWSRDGELKQTLFKHKGPIFSLKWNRKGDFLLSGSVDKTAIVWDTKTWECKQQFEFHS 293

Query: 234 EQLLGVAWRNDTSFALLSENQRIYVFNVGECLPIKTFFGRQVSINKY 94
              L V WRN+ SFA  S +  IYV  +G+  P+KTF G QVS  K+
Sbjct: 294 APTLDVDWRNNNSFATCSTDNMIYVCKIGDPRPVKTFSGHQVSFLKH 340


>ref|XP_003557307.1| PREDICTED: F-box-like/WD repeat-containing protein ebi-like isoform
           2 [Brachypodium distachyon]
          Length = 551

 Score =  171 bits (432), Expect = 3e-40
 Identities = 87/162 (53%), Positives = 110/162 (67%), Gaps = 2/162 (1%)
 Frame = -3

Query: 588 SAARIWKISDD-ISSMHSSLLSVYVLNDYNAKTDGQSGSITNLAWNGEGELLATGSFEGQ 412
           S ARIW I D    S+ SS  SV+VL  +  +T+ +S  +T L WNGEG LLATGS++GQ
Sbjct: 230 STARIWTIPDGPCGSIQSSPTSVHVLKHFKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQ 289

Query: 411 ISIWSKNGELKKTL-KHKDSIFFLEWNRKGDFLLAVSSDYKVIVWDTNKWEPKQELAFNS 235
             IWS++GELK+TL KHK  IF L+WN+KGDFLL+ S D   IVWDT  WE KQ+  F+S
Sbjct: 290 ARIWSRDGELKQTLFKHKGPIFSLKWNKKGDFLLSGSVDKTAIVWDTKTWECKQQFEFHS 349

Query: 234 EQLLGVAWRNDTSFALLSENQRIYVFNVGECLPIKTFFGRQV 109
              L V WRN+TSFA  S +  IYV  +G+  P+K+F G QV
Sbjct: 350 APTLDVDWRNNTSFATCSTDNMIYVCKIGDARPVKSFSGHQV 391


>dbj|BAJ92887.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 557

 Score =  169 bits (429), Expect = 6e-40
 Identities = 87/165 (52%), Positives = 109/165 (66%), Gaps = 2/165 (1%)
 Frame = -3

Query: 588 SAARIWKISDD-ISSMHSSLLSVYVLNDYNAKTDGQSGSITNLAWNGEGELLATGSFEGQ 412
           S ARIW I D    S+  S  SV+VL  +  +T+ +S  +T L WNGEG LLATGS++GQ
Sbjct: 232 STARIWTIPDGPCGSIQPSPASVHVLKHFKGRTNEKSKDVTTLDWNGEGTLLATGSYDGQ 291

Query: 411 ISIWSKNGELKKTL-KHKDSIFFLEWNRKGDFLLAVSSDYKVIVWDTNKWEPKQELAFNS 235
             IWS++GELK+TL KHK  IF L+WNRKGDFLL+ S D   IVWDT  WE KQ+  F+S
Sbjct: 292 ARIWSRDGELKQTLFKHKGPIFSLKWNRKGDFLLSGSVDKTAIVWDTKTWECKQQFEFHS 351

Query: 234 EQLLGVAWRNDTSFALLSENQRIYVFNVGECLPIKTFFGRQVSIN 100
              L V WRN+ SFA  S +  IYV  +G+  P+KTF G Q  +N
Sbjct: 352 APTLDVDWRNNNSFATCSTDNMIYVCKIGDPRPVKTFSGHQSEVN 396


>ref|XP_002447490.1| hypothetical protein SORBIDRAFT_06g001810 [Sorghum bicolor]
           gi|241938673|gb|EES11818.1| hypothetical protein
           SORBIDRAFT_06g001810 [Sorghum bicolor]
          Length = 602

 Score =  168 bits (426), Expect = 1e-39
 Identities = 87/166 (52%), Positives = 110/166 (66%), Gaps = 3/166 (1%)
 Frame = -3

Query: 588 SAARIWKISDDI--SSMHSSLLSVYVLNDYNAKTDGQSGSITNLAWNGEGELLATGSFEG 415
           S ARIW I D    S+M SS   V+VL  +  +T+ +S  +T L WNGEG LLATGS++G
Sbjct: 276 STARIWTIPDGPCGSNMQSSPPGVHVLKHFKGRTNEKSKDVTTLDWNGEGTLLATGSYDG 335

Query: 414 QISIWSKNGELKKTL-KHKDSIFFLEWNRKGDFLLAVSSDYKVIVWDTNKWEPKQELAFN 238
           Q  IWS++G+LK+TL KHK  IF L+WN+KGDFLL+ S D   IVWDT  WE KQ+  F+
Sbjct: 336 QARIWSRDGDLKQTLFKHKGPIFSLKWNKKGDFLLSGSVDKTAIVWDTKTWECKQQFEFH 395

Query: 237 SEQLLGVAWRNDTSFALLSENQRIYVFNVGECLPIKTFFGRQVSIN 100
           S   L V WRN+ SFA  S +  IYV  +GE  P+KTF G Q  +N
Sbjct: 396 SAPTLDVDWRNNNSFATCSTDNMIYVCKIGEQRPVKTFSGHQNEVN 441


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