BLASTX nr result

ID: Dioscorea21_contig00022949 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00022949
         (337 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containi...   152   3e-35
emb|CBI35164.3| unnamed protein product [Vitis vinifera]              152   3e-35
emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]   152   3e-35
gb|AEP33759.1| organelle transcript processing 82, partial [Bras...   145   4e-33
gb|AEP33772.1| organelle transcript processing 82, partial [Drab...   142   2e-32

>ref|XP_003633690.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g14820-like [Vitis vinifera]
          Length = 731

 Score =  152 bits (384), Expect = 3e-35
 Identities = 66/110 (60%), Positives = 87/110 (79%)
 Frame = -3

Query: 335 IDMYAKCGDLNCSRRMFLEMQEKHLTSWNAMINALAIHGKGNEALNLFSSMEKNGIMPND 156
           +DMYAKCGD+N + R+F+E   + +  WNA+I   A+HG G EAL++F+ ME+ G+ PND
Sbjct: 401 VDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPND 460

Query: 155 ITYIGLLNACSHAGLVEEGLKLFESMQRQYNIVPRLEHYGCVVDLLGRAG 6
           IT+IGLL+ACSHAGLV EG KLFE M   + +VP++EHYGC+VDLLGRAG
Sbjct: 461 ITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAG 510



 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 28/87 (32%), Positives = 47/87 (54%)
 Frame = -3

Query: 335 IDMYAKCGDLNCSRRMFLEMQEKHLTSWNAMINALAIHGKGNEALNLFSSMEKNGIMPND 156
           +DMYAKCG L  +R++F  + +K + SW AMI       +  EA  LF S +   +M   
Sbjct: 269 LDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEARALFDSTQNRDVM--- 325

Query: 155 ITYIGLLNACSHAGLVEEGLKLFESMQ 75
             +  +L+A + A  +++   LF+ M+
Sbjct: 326 -IWTAMLSAYAQANCIDQAFNLFDQMR 351


>emb|CBI35164.3| unnamed protein product [Vitis vinifera]
          Length = 663

 Score =  152 bits (384), Expect = 3e-35
 Identities = 66/110 (60%), Positives = 87/110 (79%)
 Frame = -3

Query: 335 IDMYAKCGDLNCSRRMFLEMQEKHLTSWNAMINALAIHGKGNEALNLFSSMEKNGIMPND 156
           +DMYAKCGD+N + R+F+E   + +  WNA+I   A+HG G EAL++F+ ME+ G+ PND
Sbjct: 315 VDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPND 374

Query: 155 ITYIGLLNACSHAGLVEEGLKLFESMQRQYNIVPRLEHYGCVVDLLGRAG 6
           IT+IGLL+ACSHAGLV EG KLFE M   + +VP++EHYGC+VDLLGRAG
Sbjct: 375 ITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAG 424


>emb|CAN80796.1| hypothetical protein VITISV_034275 [Vitis vinifera]
          Length = 771

 Score =  152 bits (384), Expect = 3e-35
 Identities = 66/110 (60%), Positives = 87/110 (79%)
 Frame = -3

Query: 335 IDMYAKCGDLNCSRRMFLEMQEKHLTSWNAMINALAIHGKGNEALNLFSSMEKNGIMPND 156
           +DMYAKCGD+N + R+F+E   + +  WNA+I   A+HG G EAL++F+ ME+ G+ PND
Sbjct: 441 VDMYAKCGDINAAGRLFIEAISRDICMWNAIITGFAMHGYGEEALDIFAEMERQGVKPND 500

Query: 155 ITYIGLLNACSHAGLVEEGLKLFESMQRQYNIVPRLEHYGCVVDLLGRAG 6
           IT+IGLL+ACSHAGLV EG KLFE M   + +VP++EHYGC+VDLLGRAG
Sbjct: 501 ITFIGLLHACSHAGLVTEGKKLFEKMVHTFGLVPQIEHYGCMVDLLGRAG 550



 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 30/82 (36%), Positives = 46/82 (56%)
 Frame = -3

Query: 335 IDMYAKCGDLNCSRRMFLEMQEKHLTSWNAMINALAIHGKGNEALNLFSSMEKNGIMPND 156
           +DMYAKCG L  +R++F  + +K + SW AMI       +  E   LF  M++  I PN+
Sbjct: 239 LDMYAKCGHLGLARQLFNGLTQKTVVSWTAMIAGCIRSNRLEEGTKLFIRMQEENIFPNE 298

Query: 155 ITYIGLLNACSHAGLVEEGLKL 90
           IT + L+  C   G ++ G +L
Sbjct: 299 ITMLSLIVECGFTGALQLGKQL 320



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 28/79 (35%), Positives = 46/79 (58%)
 Frame = -3

Query: 335 IDMYAKCGDLNCSRRMFLEMQEKHLTSWNAMINALAIHGKGNEALNLFSSMEKNGIMPND 156
           +DMY KC D+  +R +F   Q + +  W AM++A A     ++A NLF  M  +G+ P  
Sbjct: 340 VDMYGKCSDIRNARALFDSTQNRDVMIWTAMLSAYAQANCIDQAFNLFDQMRTSGVRPTK 399

Query: 155 ITYIGLLNACSHAGLVEEG 99
           +T + LL+ C+ AG ++ G
Sbjct: 400 VTIVSLLSLCAVAGALDLG 418


>gb|AEP33759.1| organelle transcript processing 82, partial [Brassica oleracea]
          Length = 691

 Score =  145 bits (365), Expect = 4e-33
 Identities = 64/110 (58%), Positives = 85/110 (77%)
 Frame = -3

Query: 335 IDMYAKCGDLNCSRRMFLEMQEKHLTSWNAMINALAIHGKGNEALNLFSSMEKNGIMPND 156
           IDMYAKCGD+  + ++F  M  K L+SWNAMI   A+HG+ N A +LFS M KNGI P+D
Sbjct: 361 IDMYAKCGDIEAAHQVFNSMMHKSLSSWNAMIFGFAMHGRANAAFDLFSRMRKNGIEPDD 420

Query: 155 ITYIGLLNACSHAGLVEEGLKLFESMQRQYNIVPRLEHYGCVVDLLGRAG 6
           IT +GLL+ACSH+GL++ G  +F+S+ + YNI P+LEHYGC++DLLG AG
Sbjct: 421 ITLVGLLSACSHSGLLDLGRHIFKSVTQDYNITPKLEHYGCMIDLLGHAG 470



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 29/79 (36%), Positives = 45/79 (56%)
 Frame = -3

Query: 335 IDMYAKCGDLNCSRRMFLEMQEKHLTSWNAMINALAIHGKGNEALNLFSSMEKNGIMPND 156
           I +Y+KCGD+  +  +F  +  K + SWN +I          EAL LF  M ++G  PND
Sbjct: 258 IGLYSKCGDVEIASGLFEGLSCKDVVSWNTLIGGYTHMNLYKEALLLFQEMLRSGESPND 317

Query: 155 ITYIGLLNACSHAGLVEEG 99
           +T + +L AC+H G ++ G
Sbjct: 318 VTMLSVLPACAHLGAIDIG 336



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 30/107 (28%), Positives = 55/107 (51%)
 Frame = -3

Query: 326 YAKCGDLNCSRRMFLEMQEKHLTSWNAMINALAIHGKGNEALNLFSSMEKNGIMPNDITY 147
           YA  GD+  +R++F  + E+ + SWNAMI     +    EAL LF  M +  + P++ T 
Sbjct: 159 YASRGDVRSARKVFDXITERDVVSWNAMITGYVENCGYEEALELFKEMMRTNVRPDEGTL 218

Query: 146 IGLLNACSHAGLVEEGLKLFESMQRQYNIVPRLEHYGCVVDLLGRAG 6
           + +L+AC+ +G +E G ++   +   +     L+     + L  + G
Sbjct: 219 VSVLSACAQSGSIELGREIHTLVDDHHGFGSSLKIVNAFIGLYSKCG 265


>gb|AEP33772.1| organelle transcript processing 82, partial [Draba nemorosa]
          Length = 526

 Score =  142 bits (359), Expect = 2e-32
 Identities = 62/110 (56%), Positives = 84/110 (76%)
 Frame = -3

Query: 335 IDMYAKCGDLNCSRRMFLEMQEKHLTSWNAMINALAIHGKGNEALNLFSSMEKNGIMPND 156
           IDMYAKCGD+  ++++F  M  + L+SWNAMI   A+HGK N A +LFS M KNGI P+D
Sbjct: 365 IDMYAKCGDIEAAKQVFDSMLTRSLSSWNAMIFGFAMHGKANAAFDLFSKMRKNGIDPDD 424

Query: 155 ITYIGLLNACSHAGLVEEGLKLFESMQRQYNIVPRLEHYGCVVDLLGRAG 6
           IT++GLL+ACSH+G+++ G  +F SM + Y I P+LEHYGC++DLLG  G
Sbjct: 425 ITFVGLLSACSHSGMLDLGRHIFRSMSQDYKITPKLEHYGCMIDLLGHCG 474



 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 29/79 (36%), Positives = 46/79 (58%)
 Frame = -3

Query: 335 IDMYAKCGDLNCSRRMFLEMQEKHLTSWNAMINALAIHGKGNEALNLFSSMEKNGIMPND 156
           ID+Y+KCG++  +  +F  +  K + SWN +I          EAL LF  M ++G  PND
Sbjct: 262 IDLYSKCGEVETACGLFEGLSYKDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGESPND 321

Query: 155 ITYIGLLNACSHAGLVEEG 99
           +T + +L AC+H G ++ G
Sbjct: 322 VTMLSILPACAHLGAIDIG 340



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 32/108 (29%), Positives = 59/108 (54%)
 Frame = -3

Query: 326 YAKCGDLNCSRRMFLEMQEKHLTSWNAMINALAIHGKGNEALNLFSSMEKNGIMPNDITY 147
           YA  G +  ++++F E+  K + SWNAMI+  A  G   EAL LF  M K  + P++ T 
Sbjct: 164 YASRGYIENAQKLFDEIPVKDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRPDESTM 223

Query: 146 IGLLNACSHAGLVEEGLKLFESMQRQYNIVPRLEHYGCVVDLLGRAGQ 3
           + +++AC+ +G +E G ++   +   +     L+    ++DL  + G+
Sbjct: 224 VTVVSACAQSGSIELGRQVHLWID-DHGFGSNLKIVNALIDLYSKCGE 270


Top