BLASTX nr result

ID: Dioscorea21_contig00022934 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00022934
         (363 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAJ91663.1| predicted protein [Hordeum vulgare subsp. vulgare]     65   4e-09
ref|XP_002263663.2| PREDICTED: sister chromatid cohesion 1 prote...    59   3e-07
ref|XP_004163522.1| PREDICTED: uncharacterized LOC101223080, par...    58   7e-07
ref|XP_004152884.1| PREDICTED: uncharacterized protein LOC101223...    58   7e-07
ref|XP_002265684.2| PREDICTED: uncharacterized protein LOC100263...    58   7e-07

>dbj|BAJ91663.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 685

 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 43/119 (36%), Positives = 64/119 (53%)
 Frame = +3

Query: 6   TDISSSIDKMLHDVQLSYRTLAHLLLGIVKIFSKKVDFLYRDSNEALMKICKSSIDSQLN 185
           TD++SS+DK+L DV+ +YR L  L+LGIV+I SKKVD+L  DSN+      ++     L 
Sbjct: 36  TDVASSVDKILPDVETTYRILGLLMLGIVRIHSKKVDYLCYDSNQFFESTVRAK--KVLK 93

Query: 186 VSKEVANTTQHKVSKQGVRAMKHKASGTLDTITPLAGVIGGPYHDTSITIPQRFELDSF 362
             K+     +  + ++  R  K  A   +  +  LA +          TIP+RFELD F
Sbjct: 94  RGKKGVCAKRLVLDQEDTRRAKRVAVVQVPEVDELADL------PPIFTIPKRFELDCF 146


>ref|XP_002263663.2| PREDICTED: sister chromatid cohesion 1 protein 3-like [Vitis
           vinifera]
          Length = 761

 Score = 59.3 bits (142), Expect = 3e-07
 Identities = 28/76 (36%), Positives = 52/76 (68%), Gaps = 1/76 (1%)
 Frame = +3

Query: 3   STDISSSIDK-MLHDVQLSYRTLAHLLLGIVKIFSKKVDFLYRDSNEALMKICKSSIDSQ 179
           +TDI S++++ M  +V ++ R   HLLLG+V+I+SKKVD+LY+D N  L+ I K+    +
Sbjct: 34  ATDIPSTVERIMFPEVPIALRMSGHLLLGVVRIYSKKVDYLYQDCNIVLIGIRKAFSSIE 93

Query: 180 LNVSKEVANTTQHKVS 227
           +N+ ++ ++   H ++
Sbjct: 94  VNLPEDASHAPFHSIT 109


>ref|XP_004163522.1| PREDICTED: uncharacterized LOC101223080, partial [Cucumis sativus]
          Length = 892

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 1/120 (0%)
 Frame = +3

Query: 6   TDISSSIDKMLH-DVQLSYRTLAHLLLGIVKIFSKKVDFLYRDSNEALMKICKSSIDSQL 182
           TDI  S+D +L  DV ++ R  +HLLLG+V+I+S+KV++L+ D +EAL+KI ++   + +
Sbjct: 35  TDIGVSVDSILFPDVPIALRLSSHLLLGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAV 94

Query: 183 NVSKEVANTTQHKVSKQGVRAMKHKASGTLDTITPLAGVIGGPYHDTSITIPQRFELDSF 362
           ++  E +                                   PYH  SIT+P+ F+LD F
Sbjct: 95  DLPPEEST---------------------------------APYH--SITLPETFDLDDF 119


>ref|XP_004152884.1| PREDICTED: uncharacterized protein LOC101223080 [Cucumis sativus]
          Length = 1147

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 1/120 (0%)
 Frame = +3

Query: 6   TDISSSIDKMLH-DVQLSYRTLAHLLLGIVKIFSKKVDFLYRDSNEALMKICKSSIDSQL 182
           TDI  S+D +L  DV ++ R  +HLLLG+V+I+S+KV++L+ D +EAL+KI ++   + +
Sbjct: 35  TDIGVSVDSILFPDVPIALRLSSHLLLGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAV 94

Query: 183 NVSKEVANTTQHKVSKQGVRAMKHKASGTLDTITPLAGVIGGPYHDTSITIPQRFELDSF 362
           ++  E +                                   PYH  SIT+P+ F+LD F
Sbjct: 95  DLPPEEST---------------------------------APYH--SITLPETFDLDDF 119


>ref|XP_002265684.2| PREDICTED: uncharacterized protein LOC100263480 [Vitis vinifera]
          Length = 1335

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 38/120 (31%), Positives = 62/120 (51%), Gaps = 1/120 (0%)
 Frame = +3

Query: 6   TDISSSIDKMLH-DVQLSYRTLAHLLLGIVKIFSKKVDFLYRDSNEALMKICKSSIDSQL 182
           TDI  S+D +L  DV ++ R  +HLLLG+V+I+S+KV++L+ D +EAL+KI ++   + +
Sbjct: 35  TDIGVSVDSILFPDVPIALRLSSHLLLGVVRIYSRKVNYLFDDCSEALLKIKQAFRSTAV 94

Query: 183 NVSKEVANTTQHKVSKQGVRAMKHKASGTLDTITPLAGVIGGPYHDTSITIPQRFELDSF 362
           ++  E +                                   PYH  SIT+P+ F+LD F
Sbjct: 95  DLPPEEST---------------------------------APYH--SITLPETFDLDDF 119


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