BLASTX nr result

ID: Dioscorea21_contig00022921 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00022921
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003625502.1| Nuclear pore complex protein Nup205 [Medicag...   150   1e-34
ref|XP_003525930.1| PREDICTED: nuclear pore complex protein Nup2...   149   2e-34
ref|XP_003633105.1| PREDICTED: nuclear pore complex protein Nup2...   147   7e-34
emb|CBI28192.3| unnamed protein product [Vitis vinifera]              147   7e-34
ref|XP_004159416.1| PREDICTED: nuclear pore complex protein Nup2...   145   3e-33

>ref|XP_003625502.1| Nuclear pore complex protein Nup205 [Medicago truncatula]
           gi|355500517|gb|AES81720.1| Nuclear pore complex protein
           Nup205 [Medicago truncatula]
          Length = 2047

 Score =  150 bits (378), Expect = 1e-34
 Identities = 76/121 (62%), Positives = 88/121 (72%)
 Frame = +3

Query: 3   AGLWYAERRDLITSLYTLLRAVVLDQGLETDLLSDVQKYLEELFNSGXXXXXXXXXXXXX 182
           AGLWY ERR LITSL+ LLRAVVLDQGLE D+L D+QKYLE++ NSG             
Sbjct: 225 AGLWYTERRYLITSLHLLLRAVVLDQGLEDDILLDIQKYLEDVVNSGLRQRLISLIKELN 284

Query: 183 XXXPSGWGGPNCERYMLDFRGAIVHRQDVVSRERLTLSHCLVLSVLITRIGSKDVKDVFA 362
              PSG GGP CERY++D RG++V RQ VVSRERL L HCLVLSVLI R   KDVKD+F+
Sbjct: 285 REEPSGVGGPQCERYVIDSRGSLVERQAVVSRERLILGHCLVLSVLIVRTSPKDVKDLFS 344

Query: 363 I 365
           +
Sbjct: 345 V 345


>ref|XP_003525930.1| PREDICTED: nuclear pore complex protein Nup205-like [Glycine max]
          Length = 1931

 Score =  149 bits (376), Expect = 2e-34
 Identities = 73/121 (60%), Positives = 88/121 (72%)
 Frame = +3

Query: 3   AGLWYAERRDLITSLYTLLRAVVLDQGLETDLLSDVQKYLEELFNSGXXXXXXXXXXXXX 182
           AGLWY ERRDLITSL+ LLRAVVLDQGL+ D+L D+QKYLE+L +SG             
Sbjct: 120 AGLWYTERRDLITSLHLLLRAVVLDQGLQDDILVDIQKYLEDLISSGLRQRLISLIKELN 179

Query: 183 XXXPSGWGGPNCERYMLDFRGAIVHRQDVVSRERLTLSHCLVLSVLITRIGSKDVKDVFA 362
              PSG GGP CE Y+LD RG++V RQ VVSRERL L HCLVLS+L+ R   KD+KD+F+
Sbjct: 180 REEPSGLGGPQCESYVLDSRGSLVERQAVVSRERLILGHCLVLSILVVRTCPKDIKDIFS 239

Query: 363 I 365
           +
Sbjct: 240 V 240


>ref|XP_003633105.1| PREDICTED: nuclear pore complex protein Nup205-like [Vitis
           vinifera]
          Length = 1934

 Score =  147 bits (372), Expect = 7e-34
 Identities = 74/119 (62%), Positives = 87/119 (73%)
 Frame = +3

Query: 6   GLWYAERRDLITSLYTLLRAVVLDQGLETDLLSDVQKYLEELFNSGXXXXXXXXXXXXXX 185
           GLWY ERRDLIT+LYTLLRAVVLDQGLE DL+ D+QKYLE+L N+G              
Sbjct: 121 GLWYTERRDLITALYTLLRAVVLDQGLEADLVVDIQKYLEDLINTGLRQRLISLMKELNR 180

Query: 186 XXPSGWGGPNCERYMLDFRGAIVHRQDVVSRERLTLSHCLVLSVLITRIGSKDVKDVFA 362
             P+G GGP+ ERY+LD RGA+V R+ VV RERL L HCLVLSVL+ R   KDVKD+F+
Sbjct: 181 EEPAGLGGPHSERYVLDSRGALVERRAVVFRERLILGHCLVLSVLVVRTSPKDVKDLFS 239


>emb|CBI28192.3| unnamed protein product [Vitis vinifera]
          Length = 1889

 Score =  147 bits (372), Expect = 7e-34
 Identities = 74/119 (62%), Positives = 87/119 (73%)
 Frame = +3

Query: 6   GLWYAERRDLITSLYTLLRAVVLDQGLETDLLSDVQKYLEELFNSGXXXXXXXXXXXXXX 185
           GLWY ERRDLIT+LYTLLRAVVLDQGLE DL+ D+QKYLE+L N+G              
Sbjct: 121 GLWYTERRDLITALYTLLRAVVLDQGLEADLVVDIQKYLEDLINTGLRQRLISLMKELNR 180

Query: 186 XXPSGWGGPNCERYMLDFRGAIVHRQDVVSRERLTLSHCLVLSVLITRIGSKDVKDVFA 362
             P+G GGP+ ERY+LD RGA+V R+ VV RERL L HCLVLSVL+ R   KDVKD+F+
Sbjct: 181 EEPAGLGGPHSERYVLDSRGALVERRAVVFRERLILGHCLVLSVLVVRTSPKDVKDLFS 239


>ref|XP_004159416.1| PREDICTED: nuclear pore complex protein Nup205-like [Cucumis
           sativus]
          Length = 1849

 Score =  145 bits (367), Expect = 3e-33
 Identities = 69/121 (57%), Positives = 89/121 (73%)
 Frame = +3

Query: 3   AGLWYAERRDLITSLYTLLRAVVLDQGLETDLLSDVQKYLEELFNSGXXXXXXXXXXXXX 182
           AGLWY ERRDLI SL+TLLRAVVLD G E  L+SD+Q++LE+L N+G             
Sbjct: 120 AGLWYTERRDLIMSLHTLLRAVVLDPGYEVGLISDIQRHLEDLVNNGLRQRLIALIKELN 179

Query: 183 XXXPSGWGGPNCERYMLDFRGAIVHRQDVVSRERLTLSHCLVLSVLITRIGSKDVKDVFA 362
              P+G GGP+CERY+LD +GA+V R+ VVSRERL + HCLVLS+L+ RIG KD +D+F+
Sbjct: 180 REEPAGLGGPSCERYLLDSKGALVERRGVVSRERLIIGHCLVLSILVVRIGPKDARDLFS 239

Query: 363 I 365
           +
Sbjct: 240 V 240


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