BLASTX nr result

ID: Dioscorea21_contig00022911 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00022911
         (915 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAH66462.1| H0718E12.6 [Oryza sativa Indica Group] gi|116309...   207   2e-51
ref|NP_001150257.1| DNA binding protein [Zea mays] gi|194702940|...   195   1e-47
gb|ACG39972.1| DNA binding protein [Zea mays]                         194   3e-47
ref|XP_002447716.1| hypothetical protein SORBIDRAFT_06g014360 [S...   192   7e-47
ref|XP_002278210.2| PREDICTED: uncharacterized protein LOC100256...   191   2e-46

>emb|CAH66462.1| H0718E12.6 [Oryza sativa Indica Group] gi|116309384|emb|CAH66463.1|
           H0718E12.7 [Oryza sativa Indica Group]
          Length = 308

 Score =  207 bits (528), Expect = 2e-51
 Identities = 127/267 (47%), Positives = 168/267 (62%), Gaps = 15/267 (5%)
 Frame = -3

Query: 757 MKKESNASSPAMKPMKFAPKIVPRKVAKAVIPKSEPVD-SKNDVIDKELLSKLSSVKNEG 581
           +KKE++   P    +KFAPK+ P+K  K ++PK+EP + SK++ +DKELL KL + ++  
Sbjct: 7   VKKETDGLPPRKGGLKFAPKVRPKKAPK-IVPKTEPAEESKDETVDKELLMKLKTSQSTD 65

Query: 580 PGRRMPNNDRK-----FAFAMGSDSTKARSFGKPRLGYDGDVYNASGSKKEKEYIEPWDY 416
           P  R    ++K      AF  G+ S+ ARSF   +   DG     S SK  KEY+EPWDY
Sbjct: 66  PFVRKFKTEKKEMRTQVAFGQGN-SSYARSFPM-QSSADG-----SASKLPKEYVEPWDY 118

Query: 415 SHSYYPVTLPLRRPYMGDPETLDEEEFGQNSTSTTFDESLIDPTDELELLEKSDEAQMLL 236
           +HS YPVTLPLRRPY GDPE L+EEEFG++S +   D  L    +EL L+ +SD+AQ+L 
Sbjct: 119 THSDYPVTLPLRRPYSGDPEILNEEEFGESSATGAQDGEL-TTAEELGLMHRSDKAQLLF 177

Query: 235 FQFPKHFSVPKVS---AGDAKGKSVLREEDNTEIKE-HNGRK-----GCTLKELPAGLMG 83
           FQ P    +PK     A   KG  V  E  +T  KE H G +     G  LK+LP G MG
Sbjct: 178 FQMPASLPLPKQPDSVAETDKGDGVDAEPTSTSSKEMHAGTRPPKVLGSKLKDLPEGFMG 237

Query: 82  KLLVYRSGAVKLKLGESLFDVSPGSDC 2
           K+LVYRSG VK+K+G+SLFDVSPGS+C
Sbjct: 238 KILVYRSGKVKMKIGDSLFDVSPGSNC 264


>ref|NP_001150257.1| DNA binding protein [Zea mays] gi|194702940|gb|ACF85554.1| unknown
           [Zea mays] gi|195637872|gb|ACG38404.1| DNA binding
           protein [Zea mays] gi|414587522|tpg|DAA38093.1| TPA: DNA
           binding protein [Zea mays]
          Length = 300

 Score =  195 bits (496), Expect = 1e-47
 Identities = 121/266 (45%), Positives = 161/266 (60%), Gaps = 10/266 (3%)
 Frame = -3

Query: 769 DQPTMKKESNAS---SPAMKPMKFAPKIVPRKVAKAVIPKSEPVDS-KNDVIDKELLSKL 602
           D+  +KKE +      P    +KFAPK+  +K AK V+PK EPV+  K D +DKELL KL
Sbjct: 3   DKNKVKKEIDGPLGPPPRKGGLKFAPKVPQKKPAK-VVPKKEPVEERKEDALDKELLMKL 61

Query: 601 SSVKNEGPGR----RMPNNDRKFAFAMGSDSTKARSFGKPRLGYDGDVYNASGSKKEKEY 434
              +N+ P R      P +  + AF  G+ S  AR+F  P+     D      SK  KEY
Sbjct: 62  KMSQNKYPSRIKSDEKPRSGTQVAFGQGN-SYYARNFPMPKK----DSSAGGASKLPKEY 116

Query: 433 IEPWDYSHSYYPVTLPLRRPYMGDPETLDEEEFGQNSTSTTFDESLIDPTDELELLEKSD 254
            EPWDYSH Y PVTLPLR+PY G+PE LDEEEFG++S S T D+ L    ++L L++ S 
Sbjct: 117 AEPWDYSHDY-PVTLPLRKPYSGNPEILDEEEFGESSASRTQDDEL-SAAEQLGLMDMSS 174

Query: 253 EAQMLLFQFPKHFSVPKVSAGDAKGKSVLREEDNTEIK--EHNGRKGCTLKELPAGLMGK 80
           E+Q L FQ P    +P+     A    V R+E   +++   HNG K   LKE+P G MGK
Sbjct: 175 ESQFLFFQLPSSLPLPRQPQSGADPNEV-RDEKREDMRPSSHNGSK---LKEVPEGYMGK 230

Query: 79  LLVYRSGAVKLKLGESLFDVSPGSDC 2
           +LVY+SG VK+K+G++LFDVS GS+C
Sbjct: 231 MLVYKSGKVKMKIGDTLFDVSFGSNC 256


>gb|ACG39972.1| DNA binding protein [Zea mays]
          Length = 300

 Score =  194 bits (492), Expect = 3e-47
 Identities = 120/265 (45%), Positives = 158/265 (59%), Gaps = 9/265 (3%)
 Frame = -3

Query: 769 DQPTMKKESNAS---SPAMKPMKFAPKIVPRKVAKAVIPKSEPVDS-KNDVIDKELLSKL 602
           D+  +KKE +      P    +KFAPK+  +K AK V+PK EPV+  K D +DKELL KL
Sbjct: 3   DKNKVKKEIDGPLGPPPRKGGLKFAPKVPQKKPAK-VVPKKEPVEERKEDALDKELLMKL 61

Query: 601 SSVKNEGPGR----RMPNNDRKFAFAMGSDSTKARSFGKPRLGYDGDVYNASGSKKEKEY 434
              +N+ P R      P +  + AF  G+ S  AR+F  P+     D      SK  KEY
Sbjct: 62  KMSQNKYPSRIKSDEKPRSGTQVAFGQGN-SYYARNFPMPKK----DSSAGGASKLPKEY 116

Query: 433 IEPWDYSHSYYPVTLPLRRPYMGDPETLDEEEFGQNSTSTTFDESLIDPTDELELLEKSD 254
            EPWDYSH Y PVTLPLR+PY G+PE LDEEEFG++S S T D+ L    ++L L++ S 
Sbjct: 117 AEPWDYSHDY-PVTLPLRKPYSGNPEILDEEEFGESSASRTQDDEL-SAAEQLGLMDMSS 174

Query: 253 EAQMLLFQFPKHFSVPKVSAGDAKGKSVLREE-DNTEIKEHNGRKGCTLKELPAGLMGKL 77
           E+Q L FQ P    +P+     A    V  E+ +      HNG K   LKE+P G MGK+
Sbjct: 175 ESQFLFFQLPSSLPLPRQPQSVADPNEVRDEKREGMRPSSHNGSK---LKEVPEGYMGKM 231

Query: 76  LVYRSGAVKLKLGESLFDVSPGSDC 2
           LVY+SG VK+K+G++LFDVS GS+C
Sbjct: 232 LVYKSGKVKMKIGDTLFDVSFGSNC 256


>ref|XP_002447716.1| hypothetical protein SORBIDRAFT_06g014360 [Sorghum bicolor]
           gi|241938899|gb|EES12044.1| hypothetical protein
           SORBIDRAFT_06g014360 [Sorghum bicolor]
          Length = 299

 Score =  192 bits (489), Expect = 7e-47
 Identities = 120/265 (45%), Positives = 160/265 (60%), Gaps = 9/265 (3%)
 Frame = -3

Query: 769 DQPTMKKESNAS-SPAMKP--MKFAPKIVPRKVAKAVIPKSEPVD-SKNDVIDKELLSKL 602
           D+  +KKE +    PA +   +KFAPK+  +K AK V+PK EPV+ SK + +DKELL KL
Sbjct: 3   DKNKVKKEIDGPLGPATRKGGLKFAPKVPQKKPAK-VVPKKEPVEESKEETVDKELLMKL 61

Query: 601 SSVKNEGPGRRMPNNDR-----KFAFAMGSDSTKARSFGKPRLGYDGDVYNASGSKKEKE 437
              +N+ P  R+ + D+     + AF  GS S+ AR F  P+     D      SK  KE
Sbjct: 62  KMSQNKSPSARIKSGDKPKSGTQVAFGQGS-SSYARYFPMPKK----DSSAGEASKLPKE 116

Query: 436 YIEPWDYSHSYYPVTLPLRRPYMGDPETLDEEEFGQNSTSTTFDESLIDPTDELELLEKS 257
           Y EPWDY+H Y PVTLPLRRPY G+PE LDE+EFG++STS + D  L    +EL L++  
Sbjct: 117 YAEPWDYTHDY-PVTLPLRRPYSGNPEILDEKEFGESSTSRSEDAQL-SAAEELGLMDWP 174

Query: 256 DEAQMLLFQFPKHFSVPKVSAGDAKGKSVLREEDNTEIKEHNGRKGCTLKELPAGLMGKL 77
            E+Q L FQFP    +P+     A    V  E    E    +   G  LKE+P G MG++
Sbjct: 175 AESQFLYFQFPSSLPLPRQPQSVANPNVVSNER--REDMRPSSHIGSRLKEIPEGYMGRI 232

Query: 76  LVYRSGAVKLKLGESLFDVSPGSDC 2
           LVYRSG VK+K+G++LFDVS GS+C
Sbjct: 233 LVYRSGKVKMKIGDALFDVSSGSNC 257


>ref|XP_002278210.2| PREDICTED: uncharacterized protein LOC100256088 [Vitis vinifera]
          Length = 289

 Score =  191 bits (486), Expect = 2e-46
 Identities = 110/257 (42%), Positives = 150/257 (58%), Gaps = 10/257 (3%)
 Frame = -3

Query: 742 NASSPAMKPMKFAPKIVPRKVAKAVIPKSEPVDSKNDVIDKELLSKLSSVKNEG-PGRRM 566
           N+++ A + ++FAPK  PR+V K+V+PKSE  +  +     EL+   +    +G P    
Sbjct: 8   NSTAAATRKVRFAPK-APRRVPKSVVPKSEVAEDDDAAQANELMRHFNEASMKGKPKAEK 66

Query: 565 PNNDRKFAFAMGSDSTKARSFGKPRLGYDGDVYN---------ASGSKKEKEYIEPWDYS 413
                + AF  G  S   RS+G PR   +   Y           SG    KEY EPWDY 
Sbjct: 67  KLAPTQVAFGYGGASASIRSYGTPRGATNSSRYQDPASGGGLYGSGLSDHKEYKEPWDY- 125

Query: 412 HSYYPVTLPLRRPYMGDPETLDEEEFGQNSTSTTFDESLIDPTDELELLEKSDEAQMLLF 233
           ++YYPVTLPLRRPY G+PE LDEEEFG+ S ST +DE+  +P  EL L++++ EA ML  
Sbjct: 126 YTYYPVTLPLRRPYSGNPELLDEEEFGEASESTAYDENSTNPAMELGLMDENQEASMLFL 185

Query: 232 QFPKHFSVPKVSAGDAKGKSVLREEDNTEIKEHNGRKGCTLKELPAGLMGKLLVYRSGAV 53
           Q P    + K +A               E+KE+   K C L+ELP+G MGK+LVY+SGA+
Sbjct: 186 QLPATMPMIKQAA-------------TAEVKEN---KTCRLEELPSGFMGKMLVYKSGAI 229

Query: 52  KLKLGESLFDVSPGSDC 2
           KLKLG++L+DVSPG DC
Sbjct: 230 KLKLGDTLYDVSPGLDC 246


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