BLASTX nr result

ID: Dioscorea21_contig00022883 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00022883
         (443 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69124.1| hypothetical protein VITISV_026287 [Vitis vinifera]    79   5e-13
emb|CBI27664.3| unnamed protein product [Vitis vinifera]               71   1e-10
ref|XP_002271312.1| PREDICTED: squamosa promoter-binding-like pr...    71   1e-10
gb|ADG36381.1| promoter-binding protein SPL10 [Vitis vinifera]         69   3e-10
ref|XP_002514905.1| LIGULELESS1 protein, putative [Ricinus commu...    69   3e-10

>emb|CAN69124.1| hypothetical protein VITISV_026287 [Vitis vinifera]
          Length = 1048

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 52/116 (44%), Positives = 65/116 (56%), Gaps = 6/116 (5%)
 Frame = +2

Query: 8    QGLEASAAASNLDGAPDLRRALSLLSTDTWGSAEPGLTSLVPVVDKSQTKAVLPAMQVMS 187
            + LEASA ASN + APD RRALSLLST++WG  +PG TSL  ++  +Q     P      
Sbjct: 933  KSLEASAIASNSNVAPDFRRALSLLSTNSWGLNDPGPTSLDQLMHVNQXSMAQPTXHAEP 992

Query: 188  STTDLWKDE----QSLNQQARVLPFNLHSNGSE-FQEFQL-KAPYEAAFFDSNHIH 337
                L   E    Q    + R    +LH+NGS  FQEFQL KAPYE+  F  N I+
Sbjct: 993  HNWALASSENMHVQQTPSETRGHSLDLHNNGSSMFQEFQLFKAPYESGCFYPNQIN 1048


>emb|CBI27664.3| unnamed protein product [Vitis vinifera]
          Length = 418

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 49/115 (42%), Positives = 70/115 (60%), Gaps = 10/115 (8%)
 Frame = +2

Query: 2   LNQGLEASAAASNLDGAPDLRRALSLLSTDTWGSAEPGLTSLVP------VVDKSQTKAV 163
           LNQGL  S  +SNLD + DLRRALSLLST++WGS E   T  +P      V   S  +++
Sbjct: 302 LNQGLGDSMISSNLDTSQDLRRALSLLSTNSWGSCE---TQPIPSDHPMHVNQTSMPQSI 358

Query: 164 LPAMQ--VMSSTTDLWKDE-QSLNQQARVLPFNLHSNGSEFQEFQL-KAPYEAAF 316
           + A+   ++ ST++ W+ E  S + +  +LP     N + FQEF+L KAPYE+ F
Sbjct: 359 MHAVSQGMLHSTSEHWRTELPSTDSRVHILPSQGDGN-THFQEFKLFKAPYESGF 412


>ref|XP_002271312.1| PREDICTED: squamosa promoter-binding-like protein 12-like [Vitis
           vinifera]
          Length = 477

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 49/115 (42%), Positives = 70/115 (60%), Gaps = 10/115 (8%)
 Frame = +2

Query: 2   LNQGLEASAAASNLDGAPDLRRALSLLSTDTWGSAEPGLTSLVP------VVDKSQTKAV 163
           LNQGL  S  +SNLD + DLRRALSLLST++WGS E   T  +P      V   S  +++
Sbjct: 361 LNQGLGDSMISSNLDTSQDLRRALSLLSTNSWGSCE---TQPIPSDHPMHVNQTSMPQSI 417

Query: 164 LPAMQ--VMSSTTDLWKDE-QSLNQQARVLPFNLHSNGSEFQEFQL-KAPYEAAF 316
           + A+   ++ ST++ W+ E  S + +  +LP     N + FQEF+L KAPYE+ F
Sbjct: 418 MHAVSQGMLHSTSEHWRTELPSTDSRVHILPSQGDGN-THFQEFKLFKAPYESGF 471


>gb|ADG36381.1| promoter-binding protein SPL10 [Vitis vinifera]
          Length = 500

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 45/105 (42%), Positives = 58/105 (55%), Gaps = 5/105 (4%)
 Frame = +2

Query: 2   LNQGLEASAAASNLDGAPDLRRALSLLSTDTWGSAEPGLTSLVPVVDKSQTKAVLPAMQV 181
           LNQGLEASA ASN + APD RRALSLLST++WG  +PG TSL  ++  +Q+    P M V
Sbjct: 348 LNQGLEASAIASNSNVAPDFRRALSLLSTNSWGLNDPGPTSLDQLMHVNQSSMAQPTMHV 407

Query: 182 MSSTTDLWKDE----QSLNQQARVLPFNLHSNGSE-FQEFQLKAP 301
                 L   E    Q    + R    +LH+N +  F+ F    P
Sbjct: 408 EPHNWALASSENMHVQQTPSEIRGHSLDLHNNEAACFKSFNYLKP 452


>ref|XP_002514905.1| LIGULELESS1 protein, putative [Ricinus communis]
           gi|223545956|gb|EEF47459.1| LIGULELESS1 protein,
           putative [Ricinus communis]
          Length = 483

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 46/114 (40%), Positives = 65/114 (57%), Gaps = 6/114 (5%)
 Frame = +2

Query: 2   LNQGLEASAAASNLDGAPDLRRALSLLSTDTWGSAEPGLTSLVPVVDKSQT---KAVLPA 172
           LNQ LE S  +SN+D   DL RALSLLST++WGS EP   S       S T   ++VL A
Sbjct: 367 LNQDLEESIISSNVDATQDLHRALSLLSTNSWGSCEPKSFSHERPAQLSHTGMPQSVLHA 426

Query: 173 MQ--VMSSTTDLWKDEQSLNQQARVLPFNLHSNGSEFQEFQ-LKAPYEAAFFDS 325
           +   +  +++D W+ EQ +         + + + S FQEFQ L+APY+  F+ S
Sbjct: 427 VPQGLPLTSSDYWRAEQHITNSRVHTLTSQNDSSSYFQEFQLLRAPYDNDFYSS 480


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