BLASTX nr result

ID: Dioscorea21_contig00022875 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00022875
         (684 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCA65996.1| hypothetical protein [Beta vulgaris subsp. vulga...   110   3e-22
emb|CCA66008.1| hypothetical protein [Beta vulgaris subsp. vulga...   100   4e-19
ref|XP_003589692.1| hypothetical protein MTR_1g035150 [Medicago ...    95   1e-17
gb|AAD37019.2| putative non-LTR retrolelement reverse transcript...    95   1e-17
dbj|BAE79383.1| unnamed protein product [Ipomoea batatas]              94   2e-17

>emb|CCA65996.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 744

 Score =  110 bits (274), Expect = 3e-22
 Identities = 50/138 (36%), Positives = 81/138 (58%)
 Frame = +3

Query: 24  DRLLWEGPWSVGGMVLQLTPWRAGFQPAFEKLDTAAVWIQLHHLPMEFWDAEMLELLGSR 203
           ++ L+ GPW +    L LT W+  F+P+    D   VWI+   LP+E++D E L  +  +
Sbjct: 175 EKALFGGPWFILNHYLMLTRWKPDFRPSQSVFDKIMVWIRFPELPLEYYDKEALFAIAGK 234

Query: 204 FGQVLKIDELTLNTTRAKFARLCVEIDLSKPLLTGLWVGRRDQQVMVAVLYERLPSFCFH 383
            G+ +K+D  T +  R ++AR+C+E+DL+K L++ +WV R  Q V     YE L   CF 
Sbjct: 235 VGKPIKVDYATDHMARGRYARVCIELDLAKALVSKVWVARAWQNVE----YENLSLVCFL 290

Query: 384 CGRVGHSVEACSHPIASR 437
           CG++GH  + CSH +  +
Sbjct: 291 CGKIGHRRDQCSHGLGEQ 308


>emb|CCA66008.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 678

 Score =  100 bits (248), Expect = 4e-19
 Identities = 48/132 (36%), Positives = 76/132 (57%)
 Frame = +3

Query: 24  DRLLWEGPWSVGGMVLQLTPWRAGFQPAFEKLDTAAVWIQLHHLPMEFWDAEMLELLGSR 203
           D +L +GPW +G   L +  W   F    E +     W+++ HL +E++D + L  +GS+
Sbjct: 189 DFVLTQGPWLIGDSYLTIRKWVPNFVSDQEPIKKLTAWVRIPHLSVEYFDKQFLHSIGSK 248

Query: 204 FGQVLKIDELTLNTTRAKFARLCVEIDLSKPLLTGLWVGRRDQQVMVAVLYERLPSFCFH 383
            G+V+KID  T +  R ++ R C+E+DLSKPLL+     R + +V + V YE L   CF 
Sbjct: 249 IGKVIKIDRNTESMDRGQYVRFCIEVDLSKPLLSKF---RLNGKVWI-VQYEGLRLICFK 304

Query: 384 CGRVGHSVEACS 419
           CG +GH  + C+
Sbjct: 305 CGHLGHKEDTCN 316


>ref|XP_003589692.1| hypothetical protein MTR_1g035150 [Medicago truncatula]
           gi|355478740|gb|AES59943.1| hypothetical protein
           MTR_1g035150 [Medicago truncatula]
          Length = 509

 Score = 95.1 bits (235), Expect = 1e-17
 Identities = 53/152 (34%), Positives = 76/152 (50%), Gaps = 7/152 (4%)
 Frame = +3

Query: 42  GPWSVGGM-----VLQLTPWRAGFQPAFEKLDTAAVWIQLHHLPMEFWDAEMLELLGSRF 206
           G WS G +     +L+L  W   F    ++   A VWI+L  LP EFW    L  + S  
Sbjct: 134 GQWSKGTLNLKPGLLRLFEWSKDFSARTQRQTHAQVWIRLLELPQEFWMDRTLREIASAI 193

Query: 207 GQVLKIDELTLNTTRAKFARLCVEIDLSKPLLTGLWVGRRDQQVMVAVLYERLPSFCFHC 386
           G +L ID  T N     +AR+ V++DLSK +   + + R      + + YERLP FC HC
Sbjct: 194 GTLLLIDSATQNRVFGHYARVLVDMDLSKHIFNEVMIERTGFSFAIGISYERLPVFCTHC 253

Query: 387 GRVGHSVEACS--HPIASRQPAVGDASGKQVV 476
           G +GH   +C   HP+  ++  V D   K +V
Sbjct: 254 GNIGHHTSSCRWLHPV--KEIPVIDKKKKSIV 283


>gb|AAD37019.2| putative non-LTR retrolelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 855

 Score = 95.1 bits (235), Expect = 1e-17
 Identities = 49/146 (33%), Positives = 75/146 (51%), Gaps = 1/146 (0%)
 Frame = +3

Query: 42  GPWSVGGMVLQLTPWRAGFQPAFEKLDTAAVWIQLHHLPMEFWDAEMLELLGSRFGQVLK 221
           GPW   G  L +  W   F P  +++ T  +W++L ++P+  +   +L  +    G+ +K
Sbjct: 111 GPWRAFGSYLLVQAWSPEFDPLRDEITTTPIWVRLMNIPLSLYHTSILMGIAGSLGKPVK 170

Query: 222 IDELTLNTTRAKFARLCVEIDLSKPLL-TGLWVGRRDQQVMVAVLYERLPSFCFHCGRVG 398
           +D  TL+  RA+FAR+C+E+DL+KPL  T L  G R       V YE L + C  CG  G
Sbjct: 171 VDMTTLHVERARFARMCIEVDLAKPLKGTLLLNGER-----YFVSYEGLANICSRCGMYG 225

Query: 399 HSVEACSHPIASRQPAVGDASGKQVV 476
           H +  C   IA ++      S   VV
Sbjct: 226 HLIHTCPQTIAEKEVNAASQSAPVVV 251


>dbj|BAE79383.1| unnamed protein product [Ipomoea batatas]
          Length = 532

 Score = 94.4 bits (233), Expect = 2e-17
 Identities = 56/163 (34%), Positives = 81/163 (49%), Gaps = 9/163 (5%)
 Frame = +3

Query: 30  LLWEGPWSVGGMVLQLTPWRAGFQPAFEKLDTAAVWIQLHHLPMEFWDAEMLELLGSRFG 209
           +L +GPW +    L    W   F+P   K    AVW++L  L ME++  + ++ +    G
Sbjct: 155 VLLDGPWKIFDNYLITQRWVPNFEPRTAKFQKMAVWVRLPELSMEYFRDDTIKAILENIG 214

Query: 210 QVLKIDELTLNTTRAKFARLCVEIDLSKPLLTGLWVGRRDQQVMVAVLYERLPSFCFHCG 389
           + L++D  T+   + +FAR  VEIDL KPL++ +WV    Q+V     YE L   CF CG
Sbjct: 215 KPLRLDRTTMAREKGRFARAAVEIDLGKPLVSEIWVMGDVQKVE----YEGLHVVCFGCG 270

Query: 390 RVGHSVEAC--SHPIASRQPAVG-------DASGKQVVEDPLD 491
            VGH  +AC  + P A    A G       D +  Q  E P D
Sbjct: 271 VVGHREQACPLARPTAPETMATGSNTETAADTAEPQPAEGPAD 313


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