BLASTX nr result

ID: Dioscorea21_contig00022870 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00022870
         (202 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAF18434.1| E3 ubiquitin ligase [Oryza sativa Indica Group] ...    93   2e-17
dbj|BAC84396.2| zinc finger (C3HC4-type RING finger) protein-lik...    93   2e-17
gb|EEC81853.1| hypothetical protein OsI_25623 [Oryza sativa Indi...    93   2e-17
ref|NP_001059363.1| Os07g0275300 [Oryza sativa Japonica Group] g...    93   2e-17
gb|AFW74639.1| hypothetical protein ZEAMMB73_320253 [Zea mays]         92   3e-17

>emb|CAF18434.1| E3 ubiquitin ligase [Oryza sativa Indica Group]
           gi|83306208|emb|CAI29541.1| ubiquitin ligase E3 [Oryza
           sativa Indica Group]
          Length = 253

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 41/67 (61%), Positives = 55/67 (82%)
 Frame = +1

Query: 1   PSLQQLEGNLVEKDDIKERLRGNEMIGRMRMEEWRKILDLDSERDDECGICMEACTKMVL 180
           P LQQLEG+L+E+D +K + R  +++ R R+E+WRK+ + D ER+DECGICME CTKMVL
Sbjct: 111 PILQQLEGSLIERD-LKGKGRCKDIVSRKRLEDWRKLCNKDVEREDECGICMETCTKMVL 169

Query: 181 PNCNHAM 201
           PNC+HAM
Sbjct: 170 PNCSHAM 176


>dbj|BAC84396.2| zinc finger (C3HC4-type RING finger) protein-like [Oryza sativa
           Japonica Group] gi|50509639|dbj|BAD31482.1| zinc finger
           (C3HC4-type RING finger) protein-like [Oryza sativa
           Japonica Group]
          Length = 209

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 41/67 (61%), Positives = 55/67 (82%)
 Frame = +1

Query: 1   PSLQQLEGNLVEKDDIKERLRGNEMIGRMRMEEWRKILDLDSERDDECGICMEACTKMVL 180
           P LQQLEG+L+E+D +K + R  +++ R R+E+WRK+ + D ER+DECGICME CTKMVL
Sbjct: 67  PILQQLEGSLIERD-LKGKGRCKDIVSRKRLEDWRKLCNKDVEREDECGICMETCTKMVL 125

Query: 181 PNCNHAM 201
           PNC+HAM
Sbjct: 126 PNCSHAM 132


>gb|EEC81853.1| hypothetical protein OsI_25623 [Oryza sativa Indica Group]
          Length = 184

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 41/67 (61%), Positives = 55/67 (82%)
 Frame = +1

Query: 1   PSLQQLEGNLVEKDDIKERLRGNEMIGRMRMEEWRKILDLDSERDDECGICMEACTKMVL 180
           P LQQLEG+L+E+D +K + R  +++ R R+E+WRK+ + D ER+DECGICME CTKMVL
Sbjct: 111 PILQQLEGSLIERD-LKGKGRCKDIVSRKRLEDWRKLCNKDVEREDECGICMETCTKMVL 169

Query: 181 PNCNHAM 201
           PNC+HAM
Sbjct: 170 PNCSHAM 176


>ref|NP_001059363.1| Os07g0275300 [Oryza sativa Japonica Group]
           gi|113610899|dbj|BAF21277.1| Os07g0275300 [Oryza sativa
           Japonica Group] gi|222636824|gb|EEE66956.1| hypothetical
           protein OsJ_23829 [Oryza sativa Japonica Group]
          Length = 253

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 41/67 (61%), Positives = 55/67 (82%)
 Frame = +1

Query: 1   PSLQQLEGNLVEKDDIKERLRGNEMIGRMRMEEWRKILDLDSERDDECGICMEACTKMVL 180
           P LQQLEG+L+E+D +K + R  +++ R R+E+WRK+ + D ER+DECGICME CTKMVL
Sbjct: 111 PILQQLEGSLIERD-LKGKGRCKDIVSRKRLEDWRKLCNKDVEREDECGICMETCTKMVL 169

Query: 181 PNCNHAM 201
           PNC+HAM
Sbjct: 170 PNCSHAM 176


>gb|AFW74639.1| hypothetical protein ZEAMMB73_320253 [Zea mays]
          Length = 156

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 41/67 (61%), Positives = 55/67 (82%)
 Frame = +1

Query: 1   PSLQQLEGNLVEKDDIKERLRGNEMIGRMRMEEWRKILDLDSERDDECGICMEACTKMVL 180
           P LQQLE +L+E+D +K + R  +++ R RME+W+K+ + D ER+DECGICMEACTKMVL
Sbjct: 83  PILQQLESSLIERD-LKGKGRCKDIVSRRRMEDWKKVSNRDVEREDECGICMEACTKMVL 141

Query: 181 PNCNHAM 201
           PNC+HAM
Sbjct: 142 PNCSHAM 148


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