BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00022866
         (892 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17549.3| unnamed protein product [Vitis vinifera]              209   7e-52
ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III s...   207   3e-51
ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricin...   201   2e-49
gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora]       180   5e-43
ref|XP_004164787.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed...   176   9e-42

>emb|CBI17549.3| unnamed protein product [Vitis vinifera]
          Length = 688

 Score =  209 bits (532), Expect = 7e-52
 Identities = 126/294 (42%), Positives = 170/294 (57%), Gaps = 16/294 (5%)
 Frame = +2

Query: 2    DDIEDWVYLDYHAKGSPFSGAYQQRMVAEVHDPMQFVMSPSDYINSLCPV-TSSDAKNTK 178
            D  E WV L YH+  S FS  Y Q+MVAE + P+QF+MSP +Y+NSLCP   S+D   +K
Sbjct: 270  DAAESWVPLKYHSSESDFSARYLQKMVAEDNSPIQFLMSPYEYVNSLCPPGVSNDDNRSK 329

Query: 179  GLSRRNLLLMPLEERLKKWFCEGPQINRFNAVMHLAPNESINEVLKVIQQYADLVQGLWI 358
            GLSRR LL MPLEER K   CEGP ++RF+A+ H AP+ S+ +VL V+ ++A LVQGLW+
Sbjct: 330  GLSRRFLLSMPLEERFKTLLCEGPPVHRFSALKHFAPDNSVEDVLGVLTKHAHLVQGLWV 389

Query: 359  TKSSLLFKEEQA---RVRDYFLFLLSKNHVVSSRKITGTKFGEVS-YLKEMVSQLAVKGP 526
             KSSLLF   Q      RDY L L SK  +++  ++     G ++  LK  +S LAV+ P
Sbjct: 390  PKSSLLFPGGQGVAPLARDYILLLFSKGPLINYSQVDVP--GSLNKALKGFLSILAVERP 447

Query: 527  T-SDWKLKDAPDSSFIERFPNIVKEQECAWSSREMHFLDL------SAPV----GKDKVL 673
            +  DWK K+  D SF++  P+IV+EQ   W S E    D+        PV    GK  + 
Sbjct: 448  SFRDWKFKEPTDVSFMKLHPDIVREQRRVWESLEKQITDIIHGGGRRGPVTKNSGKPSIA 507

Query: 674  MTKSSLDSSGGVSRVANRSNDVSASARTNALSIETRECLPKVVQQILRSQKVSS 835
                +   S G +R  N         R  A+S ETRE LPK ++++ R  KV S
Sbjct: 508  NKTGTSTKSDGATRATN-----GTPVRRTAMSAETREALPKALEEVFRLHKVCS 556


>ref|XP_002268044.2| PREDICTED: DNA-directed RNA polymerase III subunit RPC5 [Vitis
            vinifera]
          Length = 672

 Score =  207 bits (526), Expect = 3e-51
 Identities = 124/291 (42%), Positives = 169/291 (58%), Gaps = 16/291 (5%)
 Frame = +2

Query: 11   EDWVYLDYHAKGSPFSGAYQQRMVAEVHDPMQFVMSPSDYINSLCPV-TSSDAKNTKGLS 187
            + WV L YH+  S FS  Y Q+MVAE + P+QF+MSP +Y+NSLCP   S+D   +KGLS
Sbjct: 257  QSWVPLKYHSSESDFSARYLQKMVAEDNSPIQFLMSPYEYVNSLCPPGVSNDDNRSKGLS 316

Query: 188  RRNLLLMPLEERLKKWFCEGPQINRFNAVMHLAPNESINEVLKVIQQYADLVQGLWITKS 367
            RR LL MPLEER K   CEGP ++RF+A+ H AP+ S+ +VL V+ ++A LVQGLW+ KS
Sbjct: 317  RRFLLSMPLEERFKTLLCEGPPVHRFSALKHFAPDNSVEDVLGVLTKHAHLVQGLWVPKS 376

Query: 368  SLLFKEEQA---RVRDYFLFLLSKNHVVSSRKITGTKFGEVS-YLKEMVSQLAVKGPT-S 532
            SLLF   Q      RDY L L SK  +++  ++     G ++  LK  +S LAV+ P+  
Sbjct: 377  SLLFPGGQGVAPLARDYILLLFSKGPLINYSQVDVP--GSLNKALKGFLSILAVERPSFR 434

Query: 533  DWKLKDAPDSSFIERFPNIVKEQECAWSSREMHFLDL------SAPV----GKDKVLMTK 682
            DWK K+  D SF++  P+IV+EQ   W S E    D+        PV    GK  +    
Sbjct: 435  DWKFKEPTDVSFMKLHPDIVREQRRVWESLEKQITDIIHGGGRRGPVTKNSGKPSIANKT 494

Query: 683  SSLDSSGGVSRVANRSNDVSASARTNALSIETRECLPKVVQQILRSQKVSS 835
             +   S G +R  N         R  A+S ETRE LPK ++++ R  KV S
Sbjct: 495  GTSTKSDGATRATN-----GTPVRRTAMSAETREALPKALEEVFRLHKVCS 540


>ref|XP_002525112.1| DNA-directed RNA polymerase, putative [Ricinus communis]
            gi|223535571|gb|EEF37239.1| DNA-directed RNA polymerase,
            putative [Ricinus communis]
          Length = 677

 Score =  201 bits (511), Expect = 2e-49
 Identities = 113/287 (39%), Positives = 171/287 (59%), Gaps = 14/287 (4%)
 Frame = +2

Query: 17   WVYLDYHAKGSPFSGAYQQRMVAEVHDPMQFVMSPSDYINSLCPVTSSDAKNTKGLSRRN 196
            W+ L YH   S FS  Y ++M+A+   PM+F M+P DY++SLCPV S++   +KG  RR 
Sbjct: 270  WISLKYHGSKSDFSSRYLEKMIAQESSPMEFTMTPYDYMSSLCPVASNEKTKSKGPPRRF 329

Query: 197  LLLMPLEERLKKWFCEGPQINRFNAVMHLAPNESINEVLKVIQQYADLVQGLWITKSSLL 376
            LL +PL ERLKK   EGP + RF+ + H AP++S+ +VLKV+Q+Y  LVQGLW  KSSLL
Sbjct: 330  LLSLPLAERLKKLILEGPPVQRFSVLKHFAPDDSVEDVLKVLQEYGQLVQGLWAPKSSLL 389

Query: 377  FKEEQAR--VRDYFLFLLSKNHVVSSRKIT-GTKFGEVSYLKEMVSQLAVKGPT-SDWKL 544
            F +  ++  +RDY L L SKN V++S ++    K  E   +K  ++  AV+ P+  DWK 
Sbjct: 390  FPDANSKQGIRDYVLLLFSKNLVINSSQVNFPVKIKE--EIKSFLNLFAVERPSFKDWKF 447

Query: 545  KDAPDSSFIERFPNIVKEQECAWSSREMHFLDLSAPVGK----------DKVLMTKSSLD 694
            K+  D++FI+ +P+IVK+QE AW + E     +    GK            V  T   LD
Sbjct: 448  KEHTDTTFIKLYPDIVKKQEEAWDNTEKRLSKVFDRSGKASMKNAIPKPPMVHNTVKHLD 507

Query: 695  SSGGVSRVANRSNDVSASARTNALSIETRECLPKVVQQILRSQKVSS 835
            S   + ++A+    ++ +     +++ETRE L K + ++ +S KV S
Sbjct: 508  SEKSMPKIASGMRRLTKT----TITVETREALLKALPKVFQSHKVCS 550


>gb|AEI98616.1| hypothetical protein 111O18.3 [Coffea canephora]
          Length = 643

 Score =  180 bits (456), Expect = 5e-43
 Identities = 110/287 (38%), Positives = 172/287 (59%), Gaps = 11/287 (3%)
 Frame = +2

Query: 2    DDIEDWVYLDYHAKGSPFSGAYQQRMVAEVHDPMQFVMSPSDYINSLCPVTSSDAKNTKG 181
            D  EDW+ L+YH   S  S +Y ++MV      +QF M+  DY+N+LCP TS++   + G
Sbjct: 270  DTREDWIPLNYHGARSDISMSYVRKMVEHDSSHIQFSMN-HDYVNTLCPGTSNENNGSNG 328

Query: 182  LSRRNLLLMPLEERLKKWFCEGPQINRFNAVMHLAPNESINEVLKVIQQYADLVQGLWIT 361
             SR  LL +PLEER + W  +GP I+RF+A+ HLAP+ S+ ++L V+ Q+A LVQGLWI 
Sbjct: 329  PSRV-LLSLPLEERFRTWLLQGPPIHRFDALKHLAPDASVEDILAVLSQHAQLVQGLWIP 387

Query: 362  KSSLLFKEEQ---ARVRDYFLFLLSKNHVVSSRKI-TGTKFGEVSYLKEMVSQLAVKGPT 529
            KSSLL+ ++Q   A  RDY L L S+  ++++ ++    K      +++++  +A +  +
Sbjct: 388  KSSLLYGKDQGIDALARDYVLLLFSRTPIINNSQLPQQQKLNRA--MRDVLDTVAFERVS 445

Query: 530  -SDWKLKDAPDSSFIERFPNIVKEQECAWSS-----REMHFLDLSAPVGKDKVL-MTKSS 688
             +DWK K+ PD +FI+  P IV+EQE  W        E  F D + P  K+    +T ++
Sbjct: 446  LNDWKFKEPPDMTFIKLNPKIVREQEQTWERLEKLITEKIFGDKNRPATKNSSRPLTTNN 505

Query: 689  LDSSGGVSRVANRSNDVSASARTNALSIETRECLPKVVQQILRSQKV 829
              +S  +S+ A  SN ++A      +S ETRE LPK +Q++ +S KV
Sbjct: 506  PATSKSLSKHA--SNSLNAGVPRRPMSEETREALPKALQKLFQSHKV 550


>ref|XP_004164787.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase III
            subunit RPC5-like [Cucumis sativus]
          Length = 702

 Score =  176 bits (445), Expect = 9e-42
 Identities = 109/289 (37%), Positives = 158/289 (54%), Gaps = 12/289 (4%)
 Frame = +2

Query: 5    DIEDWVYLDYHAKGSPFSGAYQQRMVAEVHDPMQFVMSPSDYINSLCPVTSSDAKNTKGL 184
            D E W+ L Y+   S  S  + Q MV++   PMQF MSP DY++SLCP TS+     KG 
Sbjct: 286  DEECWIPLKYYGLESDLSTRHLQSMVSQTVSPMQFSMSPHDYMDSLCPGTSTSGNKPKGP 345

Query: 185  SRRNLLLMPLEERLKKWFCEGPQINRFNAVMHLAPNESINEVLKVIQQYADLVQGLWITK 364
            S++ LL + LEER+KK   EGP + RF+A+ H AP+    E ++ +QQYA LVQGLW+ K
Sbjct: 346  SKKYLLSLSLEERIKKLLTEGPPVQRFSALKHYAPDYETEEFIETLQQYAQLVQGLWVPK 405

Query: 365  SSLLFKEEQAR--VRDYFLFLLSKNHVVSSRKITGTKFGEVSYLKEMVSQLAVKGPT-SD 535
            S  L  ++ +    RD+ LFL SKN VVSS +I   K      +K  ++   V+ P   D
Sbjct: 406  SLFLIPQDGSGRCARDFVLFLFSKNPVVSSSQINVPK-SLRDRVKHFLNLFGVERPAFKD 464

Query: 536  WKLKDAPDSSFIERFPNIVKEQECAWSSREMHFLDL---------SAPVGKDKVLMTKSS 688
            WK K+  D  F+     I ++QE  W++ E  F  L         +A  GK  V+     
Sbjct: 465  WKFKEKTDRLFLSNHVRIAEKQEELWNNVEKGFTFLRSIKSVHHANAATGKPGVV---PK 521

Query: 689  LDSSGGVSRVANRSNDVSASARTNALSIETRECLPKVVQQILRSQKVSS 835
            L+      +   +S++   + R  A+S ETRE LPK +Q++ ++ KV S
Sbjct: 522  LEKQVSSDQTTTKSSNAPLN-RKGAMSDETREALPKALQKLFQNHKVCS 569