BLASTX nr result

ID: Dioscorea21_contig00022862 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00022862
         (332 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containi...   172   3e-41
emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]   170   1e-40
ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containi...   163   1e-38
ref|XP_002301973.1| predicted protein [Populus trichocarpa] gi|2...   161   6e-38
ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containi...   157   6e-37

>ref|XP_002284744.1| PREDICTED: pentatricopeptide repeat-containing protein At1g20230
           [Vitis vinifera]
          Length = 758

 Score =  172 bits (436), Expect = 3e-41
 Identities = 79/109 (72%), Positives = 97/109 (88%)
 Frame = -2

Query: 328 NAGNYVLLSNIYANKGIWDGVDRVRDTMKGMGLKKNPGCSWIEIKNKVHMLLAGDKTHPQ 149
           N GNY+LLSNIYA+KG+W+ V+RVRD MK  GL+KNPGCSWIE+KNKVHMLLAGDK+HPQ
Sbjct: 588 NPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCSWIEVKNKVHMLLAGDKSHPQ 647

Query: 148 LSKILVKLEQLSAEMKKLGCNPSTDFVLHNVEEQDKEQMLCGHSEKLAM 2
           +++I+ KL++LS EMKKLG  P  +FVL +VEEQDKEQ+LCGHSEKLA+
Sbjct: 648 MTQIIEKLDKLSMEMKKLGYFPEINFVLQDVEEQDKEQILCGHSEKLAV 696


>emb|CAN63659.1| hypothetical protein VITISV_008415 [Vitis vinifera]
          Length = 760

 Score =  170 bits (431), Expect = 1e-40
 Identities = 78/109 (71%), Positives = 96/109 (88%)
 Frame = -2

Query: 328 NAGNYVLLSNIYANKGIWDGVDRVRDTMKGMGLKKNPGCSWIEIKNKVHMLLAGDKTHPQ 149
           N GNY+LLSNIYA+KG+W+ V+RVRD MK  GL+KNPGCSWIE+KNKVHMLLAGDK+HPQ
Sbjct: 588 NPGNYILLSNIYASKGMWNEVNRVRDMMKNKGLRKNPGCSWIEVKNKVHMLLAGDKSHPQ 647

Query: 148 LSKILVKLEQLSAEMKKLGCNPSTDFVLHNVEEQDKEQMLCGHSEKLAM 2
           +++I+  L++LS EMKKLG  P  +FVL +VEEQDKEQ+LCGHSEKLA+
Sbjct: 648 MTQIIENLDKLSMEMKKLGYFPEINFVLQDVEEQDKEQILCGHSEKLAV 696


>ref|XP_003566320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Brachypodium distachyon]
          Length = 661

 Score =  163 bits (413), Expect = 1e-38
 Identities = 78/110 (70%), Positives = 91/110 (82%)
 Frame = -2

Query: 331 GNAGNYVLLSNIYANKGIWDGVDRVRDTMKGMGLKKNPGCSWIEIKNKVHMLLAGDKTHP 152
           GNAGNYVLLSNIYA+K +WDGV+RVRD MK MGLKK  GCSWIEIKNKVHMLLAGD +HP
Sbjct: 490 GNAGNYVLLSNIYASKKMWDGVNRVRDEMKNMGLKKEKGCSWIEIKNKVHMLLAGDNSHP 549

Query: 151 QLSKILVKLEQLSAEMKKLGCNPSTDFVLHNVEEQDKEQMLCGHSEKLAM 2
            ++ I  KL QL+ EM +LG  PS DFVLH+VEEQ+K+ +L  HSEKLA+
Sbjct: 550 MMTAITEKLNQLTIEMNRLGFAPSRDFVLHDVEEQEKDNILAVHSEKLAV 599


>ref|XP_002301973.1| predicted protein [Populus trichocarpa] gi|222843699|gb|EEE81246.1|
           predicted protein [Populus trichocarpa]
          Length = 716

 Score =  161 bits (407), Expect = 6e-38
 Identities = 77/109 (70%), Positives = 90/109 (82%)
 Frame = -2

Query: 328 NAGNYVLLSNIYANKGIWDGVDRVRDTMKGMGLKKNPGCSWIEIKNKVHMLLAGDKTHPQ 149
           N GNY+LLSNIYA+K +W  VD VRD M+  GLKKNPG SWIEIKNKVHMLLAGD +HPQ
Sbjct: 546 NPGNYILLSNIYASKAMWVEVDMVRDMMRSRGLKKNPGYSWIEIKNKVHMLLAGDSSHPQ 605

Query: 148 LSKILVKLEQLSAEMKKLGCNPSTDFVLHNVEEQDKEQMLCGHSEKLAM 2
           + +I+ KL +L+ EMKK G  P TDFVL +VEEQDKEQ+LCGHSEKLA+
Sbjct: 606 MPQIIEKLAKLTVEMKKSGYVPHTDFVLQDVEEQDKEQILCGHSEKLAV 654


>ref|XP_003549191.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g20230-like [Glycine max]
          Length = 748

 Score =  157 bits (398), Expect = 6e-37
 Identities = 72/109 (66%), Positives = 92/109 (84%)
 Frame = -2

Query: 328 NAGNYVLLSNIYANKGIWDGVDRVRDTMKGMGLKKNPGCSWIEIKNKVHMLLAGDKTHPQ 149
           N GNY+LLSNIYA+KG+WD  +R+R+ MK  GL+KNPG SWIE+ +KVHMLLAGD++HPQ
Sbjct: 578 NPGNYILLSNIYASKGLWDEENRIREVMKSKGLRKNPGYSWIEVGHKVHMLLAGDQSHPQ 637

Query: 148 LSKILVKLEQLSAEMKKLGCNPSTDFVLHNVEEQDKEQMLCGHSEKLAM 2
           +  IL KL++L+ +MKK G  P T+FVL +VEEQDKEQ+LCGHSEKLA+
Sbjct: 638 MKDILEKLDKLNMQMKKSGYLPKTNFVLQDVEEQDKEQILCGHSEKLAV 686


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