BLASTX nr result

ID: Dioscorea21_contig00022848 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00022848
         (358 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308415.1| predicted protein [Populus trichocarpa] gi|2...    57   2e-06
ref|XP_002325118.1| predicted protein [Populus trichocarpa] gi|2...    56   3e-06
ref|XP_002528401.1| conserved hypothetical protein [Ricinus comm...    56   3e-06
ref|XP_004144719.1| PREDICTED: uncharacterized protein LOC101216...    55   5e-06

>ref|XP_002308415.1| predicted protein [Populus trichocarpa] gi|222854391|gb|EEE91938.1|
            predicted protein [Populus trichocarpa]
          Length = 1157

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 26/32 (81%), Positives = 29/32 (90%), Gaps = 1/32 (3%)
 Frame = -3

Query: 347  GMASNPYNLPIGCEYYLVTVAMLPD-TIHSSP 255
            G  SNPYNLPIGCEY++VTVAMLPD TIHS+P
Sbjct: 1124 GPTSNPYNLPIGCEYFVVTVAMLPDSTIHSAP 1155


>ref|XP_002325118.1| predicted protein [Populus trichocarpa] gi|222866552|gb|EEF03683.1|
            predicted protein [Populus trichocarpa]
          Length = 1153

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 25/32 (78%), Positives = 29/32 (90%), Gaps = 1/32 (3%)
 Frame = -3

Query: 347  GMASNPYNLPIGCEYYLVTVAMLPD-TIHSSP 255
            G  SNPYNLP+GCEY++VTVAMLPD TIHS+P
Sbjct: 1120 GSTSNPYNLPMGCEYFVVTVAMLPDTTIHSAP 1151


>ref|XP_002528401.1| conserved hypothetical protein [Ricinus communis]
            gi|223532189|gb|EEF33994.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 1145

 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 26/32 (81%), Positives = 29/32 (90%), Gaps = 1/32 (3%)
 Frame = -3

Query: 347  GMASNPYNLPIGCEYYLVTVAMLPD-TIHSSP 255
            G +SNPYNLPIGCEY++VTVAMLPD TI SSP
Sbjct: 1112 GSSSNPYNLPIGCEYFVVTVAMLPDTTIRSSP 1143


>ref|XP_004144719.1| PREDICTED: uncharacterized protein LOC101216810 [Cucumis sativus]
            gi|449518296|ref|XP_004166178.1| PREDICTED:
            uncharacterized LOC101216810 [Cucumis sativus]
          Length = 1152

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 24/34 (70%), Positives = 31/34 (91%), Gaps = 1/34 (2%)
 Frame = -3

Query: 356  LSPGMASNPYNLPIGCEYYLVTVAMLPDT-IHSS 258
            L+ G++SNPY LP+GCEY++VTVAMLPDT IHS+
Sbjct: 1117 LNSGLSSNPYGLPVGCEYFIVTVAMLPDTAIHST 1150


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