BLASTX nr result

ID: Dioscorea21_contig00022825 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Dioscorea21_contig00022825
         (439 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001148698.1| LOC100282314 [Zea mays] gi|194698946|gb|ACF8...   107   1e-21
ref|XP_002467559.1| hypothetical protein SORBIDRAFT_01g030160 [S...   107   1e-21
ref|NP_001065206.1| Os10g0545200 [Oryza sativa Japonica Group] g...   104   6e-21
dbj|BAK02768.1| predicted protein [Hordeum vulgare subsp. vulgar...   104   6e-21
gb|EAZ16865.1| hypothetical protein OsJ_32341 [Oryza sativa Japo...   104   6e-21

>ref|NP_001148698.1| LOC100282314 [Zea mays] gi|194698946|gb|ACF83557.1| unknown [Zea
           mays] gi|195621480|gb|ACG32570.1| C-4 methylsterol
           oxidase [Zea mays] gi|195645132|gb|ACG42034.1| C-4
           methylsterol oxidase [Zea mays]
           gi|414867603|tpg|DAA46160.1| TPA: c-4 methylsterol
           oxidase [Zea mays]
          Length = 301

 Score =  107 bits (267), Expect = 1e-21
 Identities = 45/60 (75%), Positives = 51/60 (85%)
 Frame = +3

Query: 3   YGGAEYHDYHHYVGGQSQSNFASVFTYCDYIYGTDKGYRYQKAHLTKLREKWRTEDQNGD 182
           YGGAEYHDYHHYVGGQSQSNFASVFTYCDY+YGTDKGYR+ K +L KL++    + Q GD
Sbjct: 232 YGGAEYHDYHHYVGGQSQSNFASVFTYCDYLYGTDKGYRFHKTYLAKLKDLGHNDGQKGD 291


>ref|XP_002467559.1| hypothetical protein SORBIDRAFT_01g030160 [Sorghum bicolor]
           gi|241921413|gb|EER94557.1| hypothetical protein
           SORBIDRAFT_01g030160 [Sorghum bicolor]
          Length = 301

 Score =  107 bits (266), Expect = 1e-21
 Identities = 44/60 (73%), Positives = 53/60 (88%)
 Frame = +3

Query: 3   YGGAEYHDYHHYVGGQSQSNFASVFTYCDYIYGTDKGYRYQKAHLTKLREKWRTEDQNGD 182
           YGGAEYHDYHHYVGGQSQSNFASVFTYCDY+YGTD+GYR+ KA+L KL++  + + + GD
Sbjct: 232 YGGAEYHDYHHYVGGQSQSNFASVFTYCDYLYGTDRGYRFHKAYLAKLKDLGQNDGEKGD 291


>ref|NP_001065206.1| Os10g0545200 [Oryza sativa Japonica Group]
           gi|13357250|gb|AAK20047.1|AC025783_7 putative C-4 sterol
           methyl oxidase [Oryza sativa Japonica Group]
           gi|31433360|gb|AAP54879.1| Sterol desaturase family
           protein, expressed [Oryza sativa Japonica Group]
           gi|113639815|dbj|BAF27120.1| Os10g0545200 [Oryza sativa
           Japonica Group] gi|215704358|dbj|BAG93792.1| unnamed
           protein product [Oryza sativa Japonica Group]
           gi|215768438|dbj|BAH00667.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 301

 Score =  104 bits (260), Expect = 6e-21
 Identities = 45/61 (73%), Positives = 51/61 (83%)
 Frame = +3

Query: 3   YGGAEYHDYHHYVGGQSQSNFASVFTYCDYIYGTDKGYRYQKAHLTKLREKWRTEDQNGD 182
           YGGAEYHDYHHYVG QSQSNFASVFTYCDY+YGTDKGYRY KA+  K++   +TE +  D
Sbjct: 232 YGGAEYHDYHHYVGRQSQSNFASVFTYCDYLYGTDKGYRYHKAYQAKMKALGQTEGEKAD 291

Query: 183 S 185
           S
Sbjct: 292 S 292


>dbj|BAK02768.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326509883|dbj|BAJ87157.1| predicted protein [Hordeum
           vulgare subsp. vulgare] gi|326519356|dbj|BAJ96677.1|
           predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 301

 Score =  104 bits (260), Expect = 6e-21
 Identities = 47/65 (72%), Positives = 54/65 (83%), Gaps = 4/65 (6%)
 Frame = +3

Query: 3   YGGAEYHDYHHYVGGQSQSNFASVFTYCDYIYGTDKGYRYQKAHLTKLRE----KWRTED 170
           YGGAEYHDYHHYVGGQSQSNFASVFTYCDY+YGTD+GYR+ KA+L KL++      + ED
Sbjct: 232 YGGAEYHDYHHYVGGQSQSNFASVFTYCDYLYGTDRGYRFHKAYLAKLKDLEPSDGKKED 291

Query: 171 QNGDS 185
            NG S
Sbjct: 292 ANGFS 296


>gb|EAZ16865.1| hypothetical protein OsJ_32341 [Oryza sativa Japonica Group]
          Length = 240

 Score =  104 bits (260), Expect = 6e-21
 Identities = 45/61 (73%), Positives = 51/61 (83%)
 Frame = +3

Query: 3   YGGAEYHDYHHYVGGQSQSNFASVFTYCDYIYGTDKGYRYQKAHLTKLREKWRTEDQNGD 182
           YGGAEYHDYHHYVG QSQSNFASVFTYCDY+YGTDKGYRY KA+  K++   +TE +  D
Sbjct: 171 YGGAEYHDYHHYVGRQSQSNFASVFTYCDYLYGTDKGYRYHKAYQAKMKALGQTEGEKAD 230

Query: 183 S 185
           S
Sbjct: 231 S 231


Top